Prophenoloxidases
Prophenoloxidase are involved in innade defense system which play major role in melanization. The
Basecamp page and
FTP site contain the data sets and instructions for annotation. [August 31, 2016]
Relish-like Proteins
Relish-like proteins are transcription factors and are inlvolved in Imd pathway. The
Basecamp page and
FTP site contain the data sets and instructions for annotation. [August 31, 2016]
Peroxidases
Peroxidases produce local reactive oxygen species as a immune response. The
Basecamp page and
FTP site contain the data sets and instructions for annotation. [July 25, 2016]
MD2-Like Receptors
MD2-Like Receptors (MLs) are extracellular proteins involved in signal transduction pathways by lipid recognition. The
Basecamp page and
FTP site contain the data sets and instructions for annotation. [June 06, 2016]
C-Type Lectins
C-Type Lectins(CTLs) are calcium dependent extracellular proteins involved in recognition of glycans. The
Basecamp page and
FTP site contain the data sets and instructions for annotation. [June 06, 2016]
CLIP-Domain Serine Proteases
CLIP-Domain Serine Proteases (CLIPs) are large protein family unique to arthropods. CLIP proteases are activated after infection and function in extracellular pathways for proteolytic activation of downstream proteins. The
Basecamp page and
FTP site contain the data sets and instructions for annotation. [May 05, 2016]
Inhibitors of Apoptosis
Inhibitors of Apoptosis (IAP) protein family binds to caspases which are involved in apoptotic cell death program. IAPs are also been shown to be down-regulated in cancer cells leading to tumor formation. The
Basecamp page and
FTP site contain the data sets and instructions for annotation. [March 22, 2016]
Galactoside-Binding Lectins
Galactoside-Binding Lectins (GALEs) or galectins bind to beta-galactoside sugars. GALEs are implicated in innate immunity as they might be involved in microbial recognition and/or phagocytosis. The
Basecamp page and
FTP site contain the data sets and instructions for annotation. [March 22, 2016]
Fibrinogen-Related Proteins annotation
Fibrinogen-Related Proteins (FREPs) are implicated in bacteria binding, enhancement of antimicrobial activity and interaction with parasite. The
Basecamp page and
FTP site contain the data sets and instructions for annotation. [Feb 12, 2016]
Catalases genes annotation
Catalases (CATs) are involved in the conversion of hydrogen peroxide to water and oxygen. The
Basecamp page and
FTP site contain the data sets and instructions. [Feb 10, 2016]
Autophagy genes annotation
Autophagy genes (Atg) are involved in the formation of autophagosome leading to degradation of internalized pathogens. The
Basecamp page and
FTP site contain the data sets and instructions. [Dec 23, 2015]
TEPs annotation
Thio-Ester containing proteins (TEPs) are involved in pathogen recognition and activation of immune responses. The
Basecamp page and
FTP site contain the data sets and instructions for annotation. [Nov 10, 2015]
CASPAs annotation
Caspase Activators include ARK (Apaf-1 Related Killer) and IAP (Inhibitor of Apoptosis) antagonists. The
Basecamp page and
FTP site contain the data sets and instructions. [Nov 10, 2015]
PGRP annotation
Peptidoglycan Recognition proteins are pattern recognition molecules conserved from insects to mammals and recognize bacteria and their unique cell wall component, peptidoglycan (PGN). The
Basecamp page and
FTP site contain the data sets and instructions. [Oct 16, 2015]
SRRP annotation
Small Regulatory RNA pathway members are important in many cellular processes as well as in immune defence. The
Basecamp page and
FTP site contain the data sets and instructions. [Oct 2, 2015]
CASPs annotation
Caspases are proteolytic enzymes that cleave aspartic acid of target proteins. The
Basecamp page and
FTP site contain the data sets and instructions. [Sep 8, 2015]
AMP annotation
Genes producing anti-microbial peptides are a critical part of the immune system of the psyllid. The
Basecamp page and
FTP site contain the data sets for annotating AMPs. [Sep 3, 2015]
This track contains tblastn matches to the genome for MCOT proteins.
MCOT combines gene predictions from Maker, Cufflinks, Oasis and Trinity. It also includes the uniprot annotation if available. [Aug 22, 2015]
Evidence tracks for RNAseq reads from egg, nymph and adult tissue were added to WebApollo to assist in annotation. [Aug 6, 2015]
Basecamp
site is now available
The project basecamp
site is now available. We will use this to coordinate all research activities for the project. [April 22, 2015]