format-version: 1.2
ontology: HLB
default-namespace: HLB

[Term]
id: HLB:0000000
name: HLB

[Term]
id: HLB:0000001
name: HLB Therapy efficacy and safety traits
is_a: HLB:0000000

[Term]
id: HLB:0000002
name: Assessment Date [date]
def: "Date the assessment started assuming swift completion extraordinary gaps between groups should be noted." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000003
name: Presence [boolean]
def: "Alive or Dead choice of tree (if dead is selected manually skip to the next tree in fieldbook). All canopy measurements are based on the majority of the canopy, not errant branches." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000004
name: Height [cm]
def: "Measurement of height with measuring pole placed near tree base and perpendicular to the tree. Measure vertical height to top of general canopy, ignoring errant branches." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000005
name: N-S Canopy Width [cm]
def: "Measured parallel to the row." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000006
name: E-W Canopy Width [cm]
def: "Measured perpendicular to the row." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000007
name: Skirt Height [cm]
def: "Measured to the lowest bulk of the canopy ignoring small shoots and rootstock growth. Trunk diameters are taken at 10 cm above soil unless graft union is above this point, then above graft union and marked for repetition in coming assessments. Also perpendicular to the trunk NOT parallel to the ground." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000008
name: N-S Trunk Width [mm]
def: "Measured parallel to the row." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000009
name: E-W Trunk Width [mm]
def: "Measured perpendicular to the row." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000010
name: Fruit Count
def: "This is an estimate made by counting fruit visually in groups of 5. For very large trees, count one side and double." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000011
name: Mottle % [percent]
def: "Estimate the percentage of existing leaves exhibiting any asymmetric pigment loss." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000012
name: Mottle Severity
def: "Estimate severity of the worst leaf showing mottle: 1 – very mottled to 5 – no mottling." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000013
name: Yellowing % [percent]
def: "Estimate the percentage of existing leaves exhibiting any pigment loss. Note this includes mottle." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000014
name: Canopy Color
def: "Estimate overall general canopy color: 1 very yellow to 5 very green." []
relationship: variable_of HLB:0000013

[Term]
id: HLB:0000015
name: Canopy Density/Thickness [percent]
def: "Estimate how much canopy there is compared with a full healthy canopy. If it appears to have lost 75% of its leaves than 25% dense/thick is remaining, enter 25%" []
relationship: variable_of HLB:0000013

[Term]
id: HLB:0000016
name: Canopy with Lesions [percent]
def: "Estimate the percentage of existing leaves exhibiting any canker lesions." []
relationship: variable_of HLB:0000013

[Term]
id: HLB:0000017
name: Coverage of Leaves by Lesions [percent]
def: "Estimate the percentage of coverage by canker lesions of the worst leaf." []
relationship: variable_of HLB:0000013

[Term]
id: HLB:0000018
name: Height Grouping
def: "A subjective grouping of tree height into 3 categories: Tall/Average/Stunted." []
relationship: variable_of HLB:0000013

[Term]
id: HLB:0000019
name: ACP Eggs
def: "A count of the number of eggs present on a sample branch, may be the average of multiple replicates." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000020
name: 1st Instar Nymphs
def: "A count of the number of 1st instar ACP nymphs on a sample branch, may be the average of multiple replicates." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000021
name: 2nd Instar Nymphs
def: "A count of the number of 2nd instar ACP nymphs on a sample branch, may be the average of multiple replicates." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000022
name: 3rd Instar Nymphs
def: "A count of the number of 3rd instar ACP nymphs on a sample branch, may be the average of multiple replicates." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000023
name: 4th Instar Nymphs
def: "A count of the number of 4th instar ACP nymphs on a sample branch, may be the average of multiple replicates." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000024
name: 5th Instar Nymphs
def: "A count of the number of 5th instar ACP nymphs on a sample branch, may be the average of multiple replicates." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000025
name: Branch Length [cm]
def: "Length in cm of a newly flushed branch used for tracking ACP colonization." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000026
name: Leaf Number
def: "Number of leaves on a newly flushed branch used for tracking ACP colonization." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000027
name: Health assessment
def: "Estimate overall tree health: 1 very unhealthy to 5 healthy." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000028
name: CLas 16S LL CT
def: "CLas 16S average CT value measured using LL primer set." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000029
name: Canopy volume
def: "Canpy volume." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000030
name: Avg trunk diameter
def: "Average trunk diameter." []
relationship: variable_of HLB:0000001

[Term]
id: HLB:0000031
name: ACP assessment date
def: "ACP assessment date." []
relationship: variable_of HLB:0000001