BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Dcitr_OGSv2.0_rna.fa 25,292 sequences; 49,157,538 total letters Query= 05681 Length=708 Score E Sequences producing significant alignments: (Bits) Value DcitrM081855.1.1Unknown protein. Similar to MCOT21837.0.CO. AED 0.00 1308 0.0 DcitrM056120.1.1Unknown protein. Similar to MCOT21837.0.CO. AED 0.23 1066 0.0 >DcitrM081855.1.1 Unknown protein. Similar to MCOT21837.0.CO. AED 0.00 Length=1054 Score = 1308 bits (708), Expect = 0.0 Identities = 708/708 (100%), Gaps = 0/708 (0%) Strand=Plus/Plus Query 1 ATGGCGCGTAGTTTTGCTTCACAAAGGCTCCTGGTGGTCGCTGTTGTAATATTGGCAGTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 324 ATGGCGCGTAGTTTTGCTTCACAAAGGCTCCTGGTGGTCGCTGTTGTAATATTGGCAGTT 383 Query 61 TTCCCTCGGAATGGAGTGTCACAGGCAAATTCTCCTACTGCTGGAGGAAACCCTGCAAGT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 384 TTCCCTCGGAATGGAGTGTCACAGGCAAATTCTCCTACTGCTGGAGGAAACCCTGCAAGT 443 Query 121 GTGCTCAACAGTGGTAGACCCCCCATGTCTAACTCTCTTGGTGCTGCAAGTGGACTGCTG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 444 GTGCTCAACAGTGGTAGACCCCCCATGTCTAACTCTCTTGGTGCTGCAAGTGGACTGCTG 503 Query 181 ACTACTGTACCGAACAGTGTTACCCCAATGGGATCAGTGATGGGCGCCCAACAATTAGGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 504 ACTACTGTACCGAACAGTGTTACCCCAATGGGATCAGTGATGGGCGCCCAACAATTAGGA 563 Query 241 AGCTTTCCCCAGCAGCCAGGTCAACAACCAGCGACCAATCCCCAACAACCAGTGTACCCT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 564 AGCTTTCCCCAGCAGCCAGGTCAACAACCAGCGACCAATCCCCAACAACCAGTGTACCCT 623 Query 301 CAAAACAGCGGACTGAACACCAATGCACAAGCTGCTCAGGTCCAAATGGTTCCCTTGTGG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 624 CAAAACAGCGGACTGAACACCAATGCACAAGCTGCTCAGGTCCAAATGGTTCCCTTGTGG 683 Query 361 AAAGCTATGACAATGAGTAGATTCCCCCTGGCAGCGGCTGCTGTTACGGCCATGCAACAG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 684 AAAGCTATGACAATGAGTAGATTCCCCCTGGCAGCGGCTGCTGTTACGGCCATGCAACAG 743 Query 421 CAGCAGCAAGCGGCCCTTCAACAGCCCATGTACCAACAACCGGCTAACCAAAACGGAAAT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 744 CAGCAGCAAGCGGCCCTTCAACAGCCCATGTACCAACAACCGGCTAACCAAAACGGAAAT 803 Query 481 ACCAATCCGCAACAACAGCAGCAGCAACTACAACCAATGGCACCGCAGAATAGCATGAAC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 804 ACCAATCCGCAACAACAGCAGCAGCAACTACAACCAATGGCACCGCAGAATAGCATGAAC 863 Query 541 TACCCTCAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 864 TACCCTCAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCA 923 Query 601 ATGGCCCTCCAAAGCGGACTAACCTATCCGGTCATGCAGCAGCCTTTACAACTAACTTAC 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 924 ATGGCCCTCCAAAGCGGACTAACCTATCCGGTCATGCAGCAGCCTTTACAACTAACTTAC 983 Query 661 GGTCCATCCCTTCTGGGACGCGTATTGGCTGCTATGAACAGTGGTTGA 708 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 984 GGTCCATCCCTTCTGGGACGCGTATTGGCTGCTATGAACAGTGGTTGA 1031 Score = 91.6 bits (49), Expect = 9e-18 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 547 CAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCAATGGCC 606 |||| |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 828 CAACTACAACCAATGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCC 887 Query 607 C 607 | Sbjct 888 C 888 Score = 91.6 bits (49), Expect = 9e-18 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 505 CAACTACAACCAATGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCC 564 |||| |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 870 CAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCAATGGCC 929 Query 565 C 565 | Sbjct 930 C 930 >DcitrM056120.1.1 Unknown protein. Similar to MCOT21837.0.CO. AED 0.23 Length=1746 Score = 1066 bits (577), Expect = 0.0 Identities = 684/731 (94%), Gaps = 25/731 (3%) Strand=Plus/Plus Query 1 ATGGCGCGTAGTTTTGCTTCACAAAGGCTCCTGGTGGTCGCTGTTGTAATATTGGCAGTT 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 327 ATGGTGCGTAGTTTTGCTTCACAAAGGCTCCTGGTGGTCGCTGTTGTAATATTGGCAGTT 386 Query 61 TTCCCTCGGAATGGAGTGTCACAGGCAAATTCTCCTACTGCTGGAGGAAAC----C-CT- 114 ||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 387 TTCCCTCGGAATGGAGTGTCACAGGCAAATTCTCCTACTGCTGGAGGAAACTGGCCACTA 446 Query 115 GCAAG-TGTGCTCAACAGTGGTAGACCCC--C--CA-T-GT-------CTAACTCT--C- 157 ||| | | ||| | ||| ||| | | | || | || |||||||| | Sbjct 447 GCAGGAAATCCTCCA-AGT-GTACCCAACAGCGGCAGTGGTAGGCCCCCTAACTCTCCCA 504 Query 158 TTGGTGCTGCAAGTGGACTGCTGACTACTGTACCGAACAGTGTTACCCCAATGGGATCAG 217 | | ||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||| Sbjct 505 GTAGCGCTGCAAGTGGACTGCTCACTACTGTACCCAACAGTGTTAGCCCGATGGGATCAG 564 Query 218 TGATGGGCGCCCAACAATTAGGAAGCTTTCCCCAGCAGCCAGGTCAACAACCAGCGACCA 277 ||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||| Sbjct 565 TGATGGGCGCCCAACAACTAGGAAGCTTTCCGCAGCAGCCAGGTCAGCAACCAGCGACCA 624 Query 278 ATCCCCAACAACCAGTGTACCCTCAAAACAGCGGACTGAACACCAATGCACAAGCTGCTC 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 625 ATCCCCAACAACCAGTGTACCCTCAAAACAGCGGACTGAACACCAATGCACAAGCTGCTC 684 Query 338 AGGTCCAAATGGTTCCCTTGTGGAAAGCTATGACAATGAGTAGATTCCCCCTGGCAGCGG 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 685 AGGTCCAAATGGTTCCCTTGTGGAAAGCTATGACAATGAGTAGATTCCCCCTGGCAGCGG 744 Query 398 CTGCTGTTACGGCCATGCAACAGCAGCAGCAAGCGGCCCTTCAACAGCCCATGTACCAAC 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 745 CTGCTGTTACGGCCATGCAACAGCAGCAGCAAGCGGCCCTTCAACAGCCCATGTACCAGC 804 Query 458 AACCGGCTAACCAAAACGGAAATACCAATCCGCAACAACAGCAGCAGCAACTACAACCAA 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 805 AACCGGCTAACCAAAACGGAAATACCAATCCGCAACAACAGCAGCAGCAACTACAACCAA 864 Query 518 TGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCCCCGCAGAATAGTA 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 865 TGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCCCCGCAGAATAGTA 924 Query 578 TGAACTACCCGCAACAACAACCAATGGCCCTCCAAAGCGGACTAACCTATCCGGTCATGC 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 925 TGAACTACCCGCAACAACAACCAATGGCCCTCCAAAGCGGACTAACCTATCCGGTCATGC 984 Query 638 AGCAGCCTTTACAACTAACTTACGGTCCATCCCTTCTGGGACGCGTATTGGCTGCTATGA 697 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 985 AGCAGCCTTTACAACTAGCTTACGGTCCATCCCTTCTGGGACGCGTATTGGCTGCTATGA 1044 Query 698 ACAGTGGTTGA 708 ||||||||||| Sbjct 1045 ACAGTGGTTGA 1055 Score = 91.6 bits (49), Expect = 9e-18 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 547 CAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCAATGGCC 606 |||| |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 852 CAACTACAACCAATGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCC 911 Query 607 C 607 | Sbjct 912 C 912 Score = 91.6 bits (49), Expect = 9e-18 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 505 CAACTACAACCAATGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCC 564 |||| |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 894 CAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCAATGGCC 953 Query 565 C 565 | Sbjct 954 C 954 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33142737554 Database: Dcitr_OGSv2.0_rna.fa Posted date: Mar 4, 2018 10:37 PM Number of letters in database: 49,157,538 Number of sequences in database: 25,292 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5