BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitr_OGSv2.0_cds.fa
           25,292 sequences; 34,155,564 total letters



Query= XM_008471854.3

Length=401
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcitrC010785.1.1Unknown protein. AED 0.00                             732     0.0  
DcitrC010765.1.1Unknown protein. AED 0.15                             708     0.0  


>DcitrC010785.1.1 Unknown protein. AED 0.00
Length=396

 Score = 732 bits (396),  Expect = 0.0
 Identities = 396/396 (100%), Gaps = 0/396 (0%)
 Strand=Plus/Plus

Query  6    ATGATAACTAGAAATCTTTTATTGATATTAGTCTCCTTCATTTTGTCCACTGATGGAGTG  65
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGATAACTAGAAATCTTTTATTGATATTAGTCTCCTTCATTTTGTCCACTGATGGAGTG  60

Query  66   TTTGGTTCAGGTACCTCGGTACGCAACAGTACTGCTGTCCTACTGGATCTAGCTCACCTA  125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   TTTGGTTCAGGTACCTCGGTACGCAACAGTACTGCTGTCCTACTGGATCTAGCTCACCTA  120

Query  126  TGTGAGAACACTGAAGGATCTCTCAAGAACGCCTCCTGCCAAGCATTCAGCGTCACACAG  185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  TGTGAGAACACTGAAGGATCTCTCAAGAACGCCTCCTGCCAAGCATTCAGCGTCACACAG  180

Query  186  GCAACACAAGTCTGTGGCAAAGTTCGACCCAACTATCTAGGAGAAACATTCGCGAACTTT  245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  GCAACACAAGTCTGTGGCAAAGTTCGACCCAACTATCTAGGAGAAACATTCGCGAACTTT  240

Query  246  ATCAGCGTGACGCATGCGCAGTGTAACGGTCAGACATGTCATACGGTAGTCAAGACGGAT  305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  ATCAGCGTGACGCATGCGCAGTGTAACGGTCAGACATGTCATACGGTAGTCAAGACGGAT  300

Query  306  AATGATAAATTCTACGCTACGGTAGATTGCAAGACCAGTAATGGATCACCACCGTATTGT  365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  AATGATAAATTCTACGCTACGGTAGATTGCAAGACCAGTAATGGATCACCACCGTATTGT  360

Query  366  TTTTGTAACATGATCTACGGTATTATTGAGACCTGA  401
            ||||||||||||||||||||||||||||||||||||
Sbjct  361  TTTTGTAACATGATCTACGGTATTATTGAGACCTGA  396


>DcitrC010765.1.1 Unknown protein. AED 0.15
Length=396

 Score = 708 bits (383),  Expect = 0.0
 Identities = 387/389 (99%), Gaps = 0/389 (0%)
 Strand=Plus/Plus

Query  11   AACTAGAAATCTTTTATTGATATTAGTCTCCTTCATTTTGTCCACTGATGGAGTGTTTGG  70
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  6    AACTAGAAATCTTTTATTGATATTAGTCTCCTTTATTTTGTCCACTGATGGAGTGTTTGG  65

Query  71   TTCAGGTACCTCGGTACGCAACAGTACTGCTGTCCTACTGGATCTAGCTCACCTATGTGA  130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  66   TTCAGGTACCTCGGTACGCAACAGTACTGCTGTCCTACTGGATCTAGCTCACCTATGTGA  125

Query  131  GAACACTGAAGGATCTCTCAAGAACGCCTCCTGCCAAGCATTCAGCGTCACACAGGCAAC  190
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct  126  GAACACTGAAGGATCTCTCAAGAGCGCCTCCTGCCAAGCATTCAGCGTCACACAGGCAAC  185

Query  191  ACAAGTCTGTGGCAAAGTTCGACCCAACTATCTAGGAGAAACATTCGCGAACTTTATCAG  250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  186  ACAAGTCTGTGGCAAAGTTCGACCCAACTATCTAGGAGAAACATTCGCGAACTTTATCAG  245

Query  251  CGTGACGCATGCGCAGTGTAACGGTCAGACATGTCATACGGTAGTCAAGACGGATAATGA  310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  246  CGTGACGCATGCGCAGTGTAACGGTCAGACATGTCATACGGTAGTCAAGACGGATAATGA  305

Query  311  TAAATTCTACGCTACGGTAGATTGCAAGACCAGTAATGGATCACCACCGTATTGTTTTTG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  306  TAAATTCTACGCTACGGTAGATTGCAAGACCAGTAATGGATCACCACCGTATTGTTTTTG  365

Query  371  TAACATGATCTACGGTATTATTGAGACCT  399
            |||||||||||||||||||||||||||||
Sbjct  366  TAACATGATCTACGGTATTATTGAGACCT  394



Lambda      K        H
    1.34    0.623     1.13 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 12647805612


  Database: Dcitr_OGSv2.0_cds.fa
    Posted date:  Mar 4, 2018 10:37 PM
  Number of letters in database: 34,155,564
  Number of sequences in database:  25,292



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5