BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitri_transcriptome.fasta
           60,261 sequences; 104,618,276 total letters



Query= XM_008471854.3

Length=401
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcDTr06069.4Unknown protein                                           712     0.0  


>DcDTr06069.4 Unknown protein
Length=1348

 Score = 712 bits (385),  Expect = 0.0
 Identities = 389/391 (99%), Gaps = 0/391 (0%)
 Strand=Plus/Minus

Query  11    AACTAGAAATCTTTTATTGATATTAGTCTCCTTCATTTTGTCCACTGATGGAGTGTTTGG  70
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  1117  AACTAGAAATCTTTTATTGATATTAGTCTCCTTTATTTTGTCCACTGATGGAGTGTTTGG  1058

Query  71    TTCAGGTACCTCGGTACGCAACAGTACTGCTGTCCTACTGGATCTAGCTCACCTATGTGA  130
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1057  TTCAGGTACCTCGGTACGCAACAGTACTGCTGTCCTACTGGATCTAGCTCACCTATGTGA  998

Query  131   GAACACTGAAGGATCTCTCAAGAACGCCTCCTGCCAAGCATTCAGCGTCACACAGGCAAC  190
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct  997   GAACACTGAAGGATCTCTCAAGAGCGCCTCCTGCCAAGCATTCAGCGTCACACAGGCAAC  938

Query  191   ACAAGTCTGTGGCAAAGTTCGACCCAACTATCTAGGAGAAACATTCGCGAACTTTATCAG  250
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  937   ACAAGTCTGTGGCAAAGTTCGACCCAACTATCTAGGAGAAACATTCGCGAACTTTATCAG  878

Query  251   CGTGACGCATGCGCAGTGTAACGGTCAGACATGTCATACGGTAGTCAAGACGGATAATGA  310
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  877   CGTGACGCATGCGCAGTGTAACGGTCAGACATGTCATACGGTAGTCAAGACGGATAATGA  818

Query  311   TAAATTCTACGCTACGGTAGATTGCAAGACCAGTAATGGATCACCACCGTATTGTTTTTG  370
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  817   TAAATTCTACGCTACGGTAGATTGCAAGACCAGTAATGGATCACCACCGTATTGTTTTTG  758

Query  371   TAACATGATCTACGGTATTATTGAGACCTGA  401
             |||||||||||||||||||||||||||||||
Sbjct  757   TAACATGATCTACGGTATTATTGAGACCTGA  727



Lambda      K        H
    1.34    0.623     1.13 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 38770018376


  Database: Dcitri_transcriptome.fasta
    Posted date:  Apr 30, 2019 10:57 AM
  Number of letters in database: 104,618,276
  Number of sequences in database:  60,261



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5