BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitri_transcriptome.fasta
           60,261 sequences; 104,618,276 total letters



Query= 05681

Length=2178
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcDTr11194.1Unknown protein                                           150     1e-34
DcDTr11194.2Unknown protein                                           121     7e-26


>DcDTr11194.1 Unknown protein
Length=340

 Score = 150 bits (81),  Expect = 1e-34
 Identities = 81/81 (100%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  54   GATATTTCAGTCAAACCCAGCGTTCGGTATGTTGAACTCAATCACCGACATGAAAACAAT  113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  252  GATATTTCAGTCAAACCCAGCGTTCGGTATGTTGAACTCAATCACCGACATGAAAACAAT  311

Query  114  GCGTGCGCACAGCCTGTCCGA  134
            |||||||||||||||||||||
Sbjct  312  GCGTGCGCACAGCCTGTCCGA  332


>DcDTr11194.2 Unknown protein
Length=213

 Score = 121 bits (65),  Expect = 7e-26
 Identities = 65/65 (100%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  54   GATATTTCAGTCAAACCCAGCGTTCGGTATGTTGAACTCAATCACCGACATGAAAACAAT  113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  136  GATATTTCAGTCAAACCCAGCGTTCGGTATGTTGAACTCAATCACCGACATGAAAACAAT  195

Query  114  GCGTG  118
            |||||
Sbjct  196  GCGTG  200



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 221534133579


  Database: Dcitri_transcriptome.fasta
    Posted date:  Apr 30, 2019 10:57 AM
  Number of letters in database: 104,618,276
  Number of sequences in database:  60,261



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5