BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Diaci_v2.0.ref.fasta
           1,906 sequences; 498,892,910 total letters



Query= Untitled_sequence

Length=252
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

ScVcwli_3185                                                          459     7e-128


>ScVcwli_3185 
Length=312644

 Score = 459 bits (248),  Expect = 7e-128
 Identities = 251/252 (99%), Gaps = 1/252 (0%)
 Strand=Plus/Plus

Query  1      AAACACTAAGGAAACACCCATCCCTACCTCAGTTGAATCGCAGGAGCGTACGCCCCTATA  60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  41263  AAACACTAAGGAAACACCCATCCCTACCTCAGTTGAATCGCAGGAGCGTACGCCCCTATA  41322

Query  61     CTATGCCAGAAACTGGGCACACTATCAAGTCTCGAACCCGGATCCTTGTACCAGTCTACG  120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  41323  CTATGCCAGAAACTGGGCACACTATCAAGTCTCGAACCCGGATCCTTGTACCAGTCTACG  41382

Query  121    CTATTCATTACGACCCGGAATACTATCCCAACCCTGAAATATTTGACCCGGAAAGGTTTA  180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  41383  CTATTCATTACGACCCGGAATACTATCCCAACCCTGAAATATTTGACCCGGAAAGGTTTA  41442

Query  181    GCCCCGAGCAGGTGGCTGCGAGAACTCCGTTTACCTATTTGCCGTTTGGAGATGGGCCTC  240
              |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  41443  GCCCCGAGCAGGTGGCTGCGAGAACT-CGTTTACCTATTTGCCGTTTGGAGATGGGCCTC  41501

Query  241    GCAATTGCATAG  252
              ||||||||||||
Sbjct  41502  GCAATTGCATAG  41513



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 112738598004


  Database: Diaci_v2.0.ref.fasta
    Posted date:  Mar 4, 2018 10:37 PM
  Number of letters in database: 498,892,910
  Number of sequences in database:  1,906



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5