BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 20150806Diaphorina_citri_MCOTprotein.ahrd.fasta
           30,562 sequences; 14,156,707 total letters



Query= XP_971959.1

Length=320
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

MCOT03904.0.CT| 26S proteasome non-ATPase regulatory subunit 8 | ...  236     8e-77


>MCOT03904.0.CT | 26S proteasome non-ATPase regulatory subunit 8 | Similar to 
E2AVX2 | *** | PANTHER PTHR12387 | Pfam PF10075
Length=262

 Score = 236 bits (601),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 130/262 (50%), Positives = 175/262 (67%), Gaps = 4/262 (2%)

Query  60   NDVTTLYKQLKSEWNNPKPNLAKVEQLLSELKLELTHLMFLPTSNASASKQELLLARDVL  119
             D+    + LK E + PKP+L K + LL +LK  LT L FLP+++   SK EL+LAR +L
Sbjct  4    GDIQKNTQALKQELDKPKPDLVKCKTLLDQLKFGLTTLQFLPSTDVQVSKDELILARTIL  63

Query  120  EIGVQWSIASSNIPAFERYMAQLKCYYFDYKD-QLPESSFKYQLLGLNLLFLLSQNRVAE  178
            E+GV +S+  ++IP+FERYM+QLKCYYF     Q+PES +K ++LGLNLL+LLSQNRVAE
Sbjct  64   ELGVNYSLQVNDIPSFERYMSQLKCYYFPSNIYQVPESPYKNEMLGLNLLYLLSQNRVAE  123

Query  179  FHTELELLPAEHIQNDVYIRHPLSIEQYLMEGSYNKIFLAKGNVPAKNYNFFMDILLDTI  238
            FH ELE +  E + NDVYI H L +EQYLMEG+Y KIFLAK  VP+  YN FM+ L+DT 
Sbjct  124  FHMELERIQYEDMVNDVYINHSLQLEQYLMEGNYRKIFLAKDGVPSPRYNAFMETLIDTT  183

Query  239  RGEIAVCVEKAYEKISLKDAARMLYLANEEAAKTFGKNKKWKLGRDNFFHFAPEVKKITE  298
            R EIA C+EKAY  IS+ D A+ L++ +E+    FGK K W    + F     E +    
Sbjct  184  RNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFGKKKGWNQVGNQFIFIREEKQSDVL  243

Query  299  PIPSCELAEQAIEYAKELEMIV  320
            P+   +L   ++ YA+E+  IV
Sbjct  244  PL---DLLLNSVSYAREMTQIV  262



Lambda      K        H        a         alpha
   0.319    0.133    0.385    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2424317955


  Database: 20150806Diaphorina_citri_MCOTprotein.ahrd.fasta
    Posted date:  May 31, 2017 11:41 AM
  Number of letters in database: 14,156,707
  Number of sequences in database:  30,562



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40