BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Candidatus_Liberibacter_asiaticus_gxpsy_proteins.fasta
           1,141 sequences; 332,037 total letters



Query= Untitled_sequence

Length=102
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|470205416|ref|YP_007599514.1|  phage-related lysozyme [Candida...  209     2e-73
gi|470205414|ref|YP_007599512.1|  phage-related lysozyme [Candida...  154     6e-51


>gi|470205416|ref|YP_007599514.1| phage-related lysozyme [Candidatus Liberibacter asiaticus str. 
gxpsy]
Length=122

 Score = 209 bits (531),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MTITAKEAEDLLLSDLRSHLDLLLDASPTLKSASENRLVAVADFVFNLGIGNYNKSTFKQ  60
            MTITAKEAEDLLLSDLRSHLDLLLDASPTLKSASENRLVAVADFVFNLGIGNYNKSTFKQ
Sbjct  21   MTITAKEAEDLLLSDLRSHLDLLLDASPTLKSASENRLVAVADFVFNLGIGNYNKSTFKQ  80

Query  61   RVDAQDWEKAAEECKKWTKAGGQSLRGIENRRAEGATMLLNG  102
            RVDAQDWEKAAEECKKWTKAGGQSLRGIENRRAEGATMLLNG
Sbjct  81   RVDAQDWEKAAEECKKWTKAGGQSLRGIENRRAEGATMLLNG  122


>gi|470205414|ref|YP_007599512.1| phage-related lysozyme [Candidatus Liberibacter asiaticus str. 
gxpsy]
Length=171

 Score = 154 bits (388),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 76/100 (76%), Positives = 82/100 (82%), Gaps = 0/100 (0%)

Query  1    MTITAKEAEDLLLSDLRSHLDLLLDASPTLKSASENRLVAVADFVFNLGIGNYNKSTFKQ  60
            MTIT KEAED LL D    L+LLL++SP LKS SENRLVAVADFVFNLGIGNYNKSTFKQ
Sbjct  70   MTITEKEAEDFLLKDASKSLNLLLESSPALKSTSENRLVAVADFVFNLGIGNYNKSTFKQ  129

Query  61   RVDAQDWEKAAEECKKWTKAGGQSLRGIENRRAEGATMLL  100
            RVDAQDWEKAAEECKKWTKAGG+ L G+  RR     +LL
Sbjct  130  RVDAQDWEKAAEECKKWTKAGGKVLPGLVKRRDAEVKLLL  169



Lambda      K        H        a         alpha
   0.314    0.129    0.363    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 10451800


  Database: Candidatus_Liberibacter_asiaticus_gxpsy_proteins.fasta
    Posted date:  Jul 20, 2015  1:34 PM
  Number of letters in database: 332,037
  Number of sequences in database:  1,141



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40