BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: SS_all_quivered_hq.fasta 42,166 sequences; 76,657,983 total letters Query= 05681 Length=2160 Score E Sequences producing significant alignments: (Bits) Value c208464/f6p23/2136isoform=c208464;full_length_coverage=6;non_full... 99.0 3e-19 c107830/f3p12/1267isoform=c107830;full_length_coverage=3;non_full... 99.0 3e-19 c88994/f8p6/1256isoform=c88994;full_length_coverage=8;non_full_le... 99.0 3e-19 c439459/f12p19/2136isoform=c439459;full_length_coverage=12;non_fu... 97.1 9e-19 c305296/f12p25/2223isoform=c305296;full_length_coverage=12;non_fu... 93.5 1e-17 c229925/f5p16/2224isoform=c229925;full_length_coverage=5;non_full... 93.5 1e-17 c85082/f4p20/1245isoform=c85082;full_length_coverage=4;non_full_l... 87.9 6e-16 c232372/f2p23/2147isoform=c232372;full_length_coverage=2;non_full... 86.1 2e-15 >c208464/f6p23/2136 isoform=c208464;full_length_coverage=6;non_full_length_coverage=23;isoform_length=2136 Length=2136 Score = 99.0 bits (53), Expect = 3e-19 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1022 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 1080 |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 2 GTTTTCGTCGAATCGGTGATTTCTGCAAGGTTCTGATTTGTCCGCAGTCCGTGATTTAA 60 Score = 99.0 bits (53), Expect = 3e-19 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2102 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 2160 |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 2 GTTTTCGTCGAATCGGTGATTTCTGCAAGGTTCTGATTTGTCCGCAGTCCGTGATTTAA 60 >c107830/f3p12/1267 isoform=c107830;full_length_coverage=3;non_full_length_coverage=12;isoform_length=1267 Length=1267 Score = 99.0 bits (53), Expect = 3e-19 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1022 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 1080 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2 GTTTTCGTTGAATCGGTGATTTCTGCAAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 60 Score = 99.0 bits (53), Expect = 3e-19 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2102 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 2160 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2 GTTTTCGTTGAATCGGTGATTTCTGCAAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 60 >c88994/f8p6/1256 isoform=c88994;full_length_coverage=8;non_full_length_coverage=6;isoform_length=1256 Length=1256 Score = 99.0 bits (53), Expect = 3e-19 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1022 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 1080 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2 GTTTTCGTTGAATCGGTGATTTCTGCAAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 60 Score = 99.0 bits (53), Expect = 3e-19 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2102 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 2160 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2 GTTTTCGTTGAATCGGTGATTTCTGCAAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 60 >c439459/f12p19/2136 isoform=c439459;full_length_coverage=12;non_full_length_coverage=19;isoform_length=2136 Length=2136 Score = 97.1 bits (52), Expect = 9e-19 Identities = 57/59 (97%), Gaps = 2/59 (3%) Strand=Plus/Plus Query 1022 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 1080 |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 2 GTTTTCGTCGAATCGGTGATTTCTGC-AAGTTCTGATTTGTCCGCAGTC-GTGATTTAA 58 Score = 97.1 bits (52), Expect = 9e-19 Identities = 57/59 (97%), Gaps = 2/59 (3%) Strand=Plus/Plus Query 2102 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 2160 |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 2 GTTTTCGTCGAATCGGTGATTTCTGC-AAGTTCTGATTTGTCCGCAGTC-GTGATTTAA 58 >c305296/f12p25/2223 isoform=c305296;full_length_coverage=12;non_full_length_coverage=25;isoform_length=2223 Length=2223 Score = 93.5 bits (50), Expect = 1e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1022 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 1080 |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 2 GTTTTCGTTGAATCGGTGATGTCTGCAAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 60 Score = 93.5 bits (50), Expect = 1e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2102 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 2160 |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 2 GTTTTCGTTGAATCGGTGATGTCTGCAAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 60 >c229925/f5p16/2224 isoform=c229925;full_length_coverage=5;non_full_length_coverage=16;isoform_length=2224 Length=2224 Score = 93.5 bits (50), Expect = 1e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1022 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 1080 |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 2 GTTTTCGTTGAATCGGTGATGTCTGCAAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 60 Score = 93.5 bits (50), Expect = 1e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2102 GTTTTCGTCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 2160 |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 2 GTTTTCGTTGAATCGGTGATGTCTGCAAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 60 >c85082/f4p20/1245 isoform=c85082;full_length_coverage=4;non_full_length_coverage=20;isoform_length=1245 Length=1245 Score = 87.9 bits (47), Expect = 6e-16 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 1031 GAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 1080 ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1 GAATCGGTGATTTCTGCAAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 50 Score = 87.9 bits (47), Expect = 6e-16 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 2111 GAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 2160 ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1 GAATCGGTGATTTCTGCAAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 50 >c232372/f2p23/2147 isoform=c232372;full_length_coverage=2;non_full_length_coverage=23;isoform_length=2147 Length=2147 Score = 86.1 bits (46), Expect = 2e-15 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 1029 TCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 1080 ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 1 TCGAATCGGTGATTTCTGCAAGGTTCTGATTTGTCCGCAGTCCGTGATTTAA 52 Score = 86.1 bits (46), Expect = 2e-15 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 2109 TCGAATCGGTGATTTCTGCGAAGTTCTGATTTGTCCGCAGTCCGTGATTTAA 2160 ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 1 TCGAATCGGTGATTTCTGCAAGGTTCTGATTTGTCCGCAGTCCGTGATTTAA 52 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 161083095633 Database: SS_all_quivered_hq.fasta Posted date: Feb 25, 2019 4:32 PM Number of letters in database: 76,657,983 Number of sequences in database: 42,166 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5