BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: SS_all_quivered_hq.fasta 42,166 sequences; 76,657,983 total letters Query= 05681 Length=708 Score E Sequences producing significant alignments: (Bits) Value c74943/f3p0/1444isoform=c74943;full_length_coverage=3;non_full_le... 1308 0.0 c88634/f7p3/1665isoform=c88634;full_length_coverage=7;non_full_le... 1066 0.0 >c74943/f3p0/1444 isoform=c74943;full_length_coverage=3;non_full_length_coverage=0;isoform_length=1444 Length=1444 Score = 1308 bits (708), Expect = 0.0 Identities = 708/708 (100%), Gaps = 0/708 (0%) Strand=Plus/Plus Query 1 ATGGCGCGTAGTTTTGCTTCACAAAGGCTCCTGGTGGTCGCTGTTGTAATATTGGCAGTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 306 ATGGCGCGTAGTTTTGCTTCACAAAGGCTCCTGGTGGTCGCTGTTGTAATATTGGCAGTT 365 Query 61 TTCCCTCGGAATGGAGTGTCACAGGCAAATTCTCCTACTGCTGGAGGAAACCCTGCAAGT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 TTCCCTCGGAATGGAGTGTCACAGGCAAATTCTCCTACTGCTGGAGGAAACCCTGCAAGT 425 Query 121 GTGCTCAACAGTGGTAGACCCCCCATGTCTAACTCTCTTGGTGCTGCAAGTGGACTGCTG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 426 GTGCTCAACAGTGGTAGACCCCCCATGTCTAACTCTCTTGGTGCTGCAAGTGGACTGCTG 485 Query 181 ACTACTGTACCGAACAGTGTTACCCCAATGGGATCAGTGATGGGCGCCCAACAATTAGGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 ACTACTGTACCGAACAGTGTTACCCCAATGGGATCAGTGATGGGCGCCCAACAATTAGGA 545 Query 241 AGCTTTCCCCAGCAGCCAGGTCAACAACCAGCGACCAATCCCCAACAACCAGTGTACCCT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 546 AGCTTTCCCCAGCAGCCAGGTCAACAACCAGCGACCAATCCCCAACAACCAGTGTACCCT 605 Query 301 CAAAACAGCGGACTGAACACCAATGCACAAGCTGCTCAGGTCCAAATGGTTCCCTTGTGG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 606 CAAAACAGCGGACTGAACACCAATGCACAAGCTGCTCAGGTCCAAATGGTTCCCTTGTGG 665 Query 361 AAAGCTATGACAATGAGTAGATTCCCCCTGGCAGCGGCTGCTGTTACGGCCATGCAACAG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 666 AAAGCTATGACAATGAGTAGATTCCCCCTGGCAGCGGCTGCTGTTACGGCCATGCAACAG 725 Query 421 CAGCAGCAAGCGGCCCTTCAACAGCCCATGTACCAACAACCGGCTAACCAAAACGGAAAT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 726 CAGCAGCAAGCGGCCCTTCAACAGCCCATGTACCAACAACCGGCTAACCAAAACGGAAAT 785 Query 481 ACCAATCCGCAACAACAGCAGCAGCAACTACAACCAATGGCACCGCAGAATAGCATGAAC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 786 ACCAATCCGCAACAACAGCAGCAGCAACTACAACCAATGGCACCGCAGAATAGCATGAAC 845 Query 541 TACCCTCAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 846 TACCCTCAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCA 905 Query 601 ATGGCCCTCCAAAGCGGACTAACCTATCCGGTCATGCAGCAGCCTTTACAACTAACTTAC 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 906 ATGGCCCTCCAAAGCGGACTAACCTATCCGGTCATGCAGCAGCCTTTACAACTAACTTAC 965 Query 661 GGTCCATCCCTTCTGGGACGCGTATTGGCTGCTATGAACAGTGGTTGA 708 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 966 GGTCCATCCCTTCTGGGACGCGTATTGGCTGCTATGAACAGTGGTTGA 1013 Score = 91.6 bits (49), Expect = 1e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 547 CAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCAATGGCC 606 |||| |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 810 CAACTACAACCAATGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCC 869 Query 607 C 607 | Sbjct 870 C 870 Score = 91.6 bits (49), Expect = 1e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 505 CAACTACAACCAATGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCC 564 |||| |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 852 CAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCAATGGCC 911 Query 565 C 565 | Sbjct 912 C 912 >c88634/f7p3/1665 isoform=c88634;full_length_coverage=7;non_full_length_coverage=3;isoform_length=1665 Length=1665 Score = 1066 bits (577), Expect = 0.0 Identities = 684/731 (94%), Gaps = 25/731 (3%) Strand=Plus/Plus Query 1 ATGGCGCGTAGTTTTGCTTCACAAAGGCTCCTGGTGGTCGCTGTTGTAATATTGGCAGTT 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 306 ATGGTGCGTAGTTTTGCTTCACAAAGGCTCCTGGTGGTCGCTGTTGTAATATTGGCAGTT 365 Query 61 TTCCCTCGGAATGGAGTGTCACAGGCAAATTCTCCTACTGCTGGAGGAAAC----C-CT- 114 ||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 366 TTCCCTCGGAATGGAGTGTCACAGGCAAATTCTCCTACTGCTGGAGGAAACTGGCCACTA 425 Query 115 GCAAG-TGTGCTCAACAGTGGTAGACCCC--C--CA-T-GT-------CTAACTCT--C- 157 ||| | | ||| | ||| ||| | | | || | || |||||||| | Sbjct 426 GCAGGAAATCCTCCA-AGT-GTACCCAACAGCGGCAGTGGTAGGCCCCCTAACTCTCCCA 483 Query 158 TTGGTGCTGCAAGTGGACTGCTGACTACTGTACCGAACAGTGTTACCCCAATGGGATCAG 217 | | ||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||| Sbjct 484 GTAGCGCTGCAAGTGGACTGCTCACTACTGTACCCAACAGTGTTAGCCCGATGGGATCAG 543 Query 218 TGATGGGCGCCCAACAATTAGGAAGCTTTCCCCAGCAGCCAGGTCAACAACCAGCGACCA 277 ||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||| Sbjct 544 TGATGGGCGCCCAACAACTAGGAAGCTTTCCGCAGCAGCCAGGTCAGCAACCAGCGACCA 603 Query 278 ATCCCCAACAACCAGTGTACCCTCAAAACAGCGGACTGAACACCAATGCACAAGCTGCTC 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 604 ATCCCCAACAACCAGTGTACCCTCAAAACAGCGGACTGAACACCAATGCACAAGCTGCTC 663 Query 338 AGGTCCAAATGGTTCCCTTGTGGAAAGCTATGACAATGAGTAGATTCCCCCTGGCAGCGG 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 664 AGGTCCAAATGGTTCCCTTGTGGAAAGCTATGACAATGAGTAGATTCCCCCTGGCAGCGG 723 Query 398 CTGCTGTTACGGCCATGCAACAGCAGCAGCAAGCGGCCCTTCAACAGCCCATGTACCAAC 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 724 CTGCTGTTACGGCCATGCAACAGCAGCAGCAAGCGGCCCTTCAACAGCCCATGTACCAGC 783 Query 458 AACCGGCTAACCAAAACGGAAATACCAATCCGCAACAACAGCAGCAGCAACTACAACCAA 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 784 AACCGGCTAACCAAAACGGAAATACCAATCCGCAACAACAGCAGCAGCAACTACAACCAA 843 Query 518 TGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCCCCGCAGAATAGTA 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 844 TGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCCCCGCAGAATAGTA 903 Query 578 TGAACTACCCGCAACAACAACCAATGGCCCTCCAAAGCGGACTAACCTATCCGGTCATGC 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 904 TGAACTACCCGCAACAACAACCAATGGCCCTCCAAAGCGGACTAACCTATCCGGTCATGC 963 Query 638 AGCAGCCTTTACAACTAACTTACGGTCCATCCCTTCTGGGACGCGTATTGGCTGCTATGA 697 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 964 AGCAGCCTTTACAACTAGCTTACGGTCCATCCCTTCTGGGACGCGTATTGGCTGCTATGA 1023 Query 698 ACAGTGGTTGA 708 ||||||||||| Sbjct 1024 ACAGTGGTTGA 1034 Score = 91.6 bits (49), Expect = 1e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 547 CAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCAATGGCC 606 |||| |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 831 CAACTACAACCAATGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCC 890 Query 607 C 607 | Sbjct 891 C 891 Score = 91.6 bits (49), Expect = 1e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 505 CAACTACAACCAATGGCACCGCAGAATAGCATGAACTACCCTCAACAACAACCAATGGCC 564 |||| |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 873 CAACAACAACCAATGGCCCCGCAGAATAGTATGAACTACCCGCAACAACAACCAATGGCC 932 Query 565 C 565 | Sbjct 933 C 933 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51637417939 Database: SS_all_quivered_hq.fasta Posted date: Feb 25, 2019 4:32 PM Number of letters in database: 76,657,983 Number of sequences in database: 42,166 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5