TBLASTN 2.6.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: Csinensis_154_v1.1.cds_annot.fasta
           46,147 sequences; 57,446,256 total letters



Query= sp|Q69P88|DRO1_ORYSJ

Length=308
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

orange1.1g040349m  similar to AT1G72490.1                             124     3e-33


>orange1.1g040349m similar to AT1G72490.1
Length=873

 Score = 124 bits (310),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 147/294 (50%), Gaps = 47/294 (16%)
 Frame = +1

Query  58   MKIFSWVANKISGKQEANRFPANSSAPYRANVSDCRKDEFSDWPQSLLAIGTFGN-----  112
            MK+F W+ NK+S KQE+N+ P  + A YR    + R +EF+DWP+ LLAIGTFGN     
Sbjct  1    MKLFGWMQNKLSSKQESNKKPNAAPASYRNKKQEPR-EEFNDWPRGLLAIGTFGNNPEIN  177

Query  113  ----KQIEEVAQVENSSDNVQSVQDTVKFTEEEVDKIRKEFETLLAIKDQAEAQRS----  164
                    E+  +++  +   S  D   FT EE+ K  KE   LL  K  ++ ++     
Sbjct  178  NNKGNNDSEIQNIQDDQEEASSSIDLQDFTPEEIGKFEKELTKLLRRKPNSDKEKKVASL  357

Query  165  ------HDDDQVGLQKR---------ADGEDNEKHIRQLINKR--------IIVskskns  201
                  +    + + +R         +D   N+ H  Q I           I+       
Sbjct  358  PLDRFLNCPSSLEVDRRISNAICNEISDDHHNKDHDNQDIKDEDIDRTISVILGRCKDIR  537

Query  202  lgkkgnTLKPRSVASLL-KLFMCKGGFTSVVPEP--RNTFPQSRMEKLLKAILQKKIHPQ  258
                   +  +S++ LL K+F+C+ GF    P+P  R++  +SRME+ L+ +L KK++PQ
Sbjct  538  ADSSKKAIGKKSISFLLKKMFVCRSGF---APQPSLRDSLQESRMERFLRIMLHKKMNPQ  708

Query  259  NSSTLVA-KRHLDWKPDETEINECLED---ALRDLDDDGAKWVKTDSEYIVLEM  308
            N+S   + K++L+     ++  +  ED    L+  + +G KWVKTDSEYIVLE+
Sbjct  709  NASRAPSMKKYLEDTKQASDNKKGTEDDREKLQGKNKEGCKWVKTDSEYIVLEI  870



Lambda      K        H        a         alpha
   0.313    0.129    0.370    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2975002148


  Database: Csinensis_154_v1.1.cds_annot.fasta
    Posted date:  Jul 15, 2015 12:57 PM
  Number of letters in database: 57,446,256
  Number of sequences in database:  46,147



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40