BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: SS_all_quivered_hq.fasta 42,166 sequences; 76,657,983 total letters Query= 123465 Length=1554 Score E Sequences producing significant alignments: (Bits) Value c260253/f4p57/3331isoform=c260253;full_length_coverage=4;non_full... 76.8 9e-13 c353923/f6p56/3487isoform=c353923;full_length_coverage=6;non_full... 76.8 9e-13 c307544/f3p54/3477isoform=c307544;full_length_coverage=3;non_full... 76.8 9e-13 c307397/f2p40/3433isoform=c307397;full_length_coverage=2;non_full... 76.8 9e-13 c266357/f6p55/3465isoform=c266357;full_length_coverage=6;non_full... 76.8 9e-13 c259125/f2p15/3508isoform=c259125;full_length_coverage=2;non_full... 76.8 9e-13 c343593/f2p26/3306isoform=c343593;full_length_coverage=2;non_full... 76.8 9e-13 c200361/f3p15/3476isoform=c200361;full_length_coverage=3;non_full... 71.3 4e-11 c337232/f4p32/3431isoform=c337232;full_length_coverage=4;non_full... 71.3 4e-11 c337108/f5p33/3489isoform=c337108;full_length_coverage=5;non_full... 71.3 4e-11 >c260253/f4p57/3331 isoform=c260253;full_length_coverage=4;non_full_length_coverage=57;isoform_length=3331 Length=3331 Score = 76.8 bits (41), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 895 CTTGTGATGTTCTATGCTCCATGGTGCGGGCATTGTAAGAAACTGAAACCTGAATATGAG 954 || || |||||||||||||||||||| || |||||||||||| |||| ||||| || ||| Sbjct 272 CTGGTCATGTTCTATGCTCCATGGTGTGGTCATTGTAAGAAATTGAAGCCTGAGTACGAG 331 Query 955 GAAGCAGCTGCCACT-ATG 972 ||| ||||||||| ||| Sbjct 332 -AAG--GCTGCCACTGATG 347 >c353923/f6p56/3487 isoform=c353923;full_length_coverage=6;non_full_length_coverage=56;isoform_length=3487 Length=3487 Score = 76.8 bits (41), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 895 CTTGTGATGTTCTATGCTCCATGGTGCGGGCATTGTAAGAAACTGAAACCTGAATATGAG 954 || || |||||||||||||||||||| || |||||||||||| |||| ||||| || ||| Sbjct 219 CTGGTCATGTTCTATGCTCCATGGTGTGGTCATTGTAAGAAATTGAAGCCTGAGTACGAG 278 Query 955 GAAGCAGCTGCCACT-ATG 972 ||| ||||||||| ||| Sbjct 279 -AAG--GCTGCCACTGATG 294 >c307544/f3p54/3477 isoform=c307544;full_length_coverage=3;non_full_length_coverage=54;isoform_length=3477 Length=3477 Score = 76.8 bits (41), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 895 CTTGTGATGTTCTATGCTCCATGGTGCGGGCATTGTAAGAAACTGAAACCTGAATATGAG 954 || || |||||||||||||||||||| || |||||||||||| |||| ||||| || ||| Sbjct 217 CTGGTCATGTTCTATGCTCCATGGTGTGGTCATTGTAAGAAATTGAAGCCTGAGTACGAG 276 Query 955 GAAGCAGCTGCCACT-ATG 972 ||| ||||||||| ||| Sbjct 277 -AAG--GCTGCCACTGATG 292 >c307397/f2p40/3433 isoform=c307397;full_length_coverage=2;non_full_length_coverage=40;isoform_length=3433 Length=3433 Score = 76.8 bits (41), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 895 CTTGTGATGTTCTATGCTCCATGGTGCGGGCATTGTAAGAAACTGAAACCTGAATATGAG 954 || || |||||||||||||||||||| || |||||||||||| |||| ||||| || ||| Sbjct 216 CTGGTCATGTTCTATGCTCCATGGTGTGGTCATTGTAAGAAATTGAAGCCTGAGTACGAG 275 Query 955 GAAGCAGCTGCCACT-ATG 972 ||| ||||||||| ||| Sbjct 276 -AAG--GCTGCCACTGATG 291 >c266357/f6p55/3465 isoform=c266357;full_length_coverage=6;non_full_length_coverage=55;isoform_length=3465 Length=3465 Score = 76.8 bits (41), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 895 CTTGTGATGTTCTATGCTCCATGGTGCGGGCATTGTAAGAAACTGAAACCTGAATATGAG 954 || || |||||||||||||||||||| || |||||||||||| |||| ||||| || ||| Sbjct 248 CTGGTCATGTTCTATGCTCCATGGTGTGGTCATTGTAAGAAATTGAAGCCTGAGTACGAG 307 Query 955 GAAGCAGCTGCCACT-ATG 972 ||| ||||||||| ||| Sbjct 308 -AAG--GCTGCCACTGATG 323 >c259125/f2p15/3508 isoform=c259125;full_length_coverage=2;non_full_length_coverage=15;isoform_length=3508 Length=3508 Score = 76.8 bits (41), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 895 CTTGTGATGTTCTATGCTCCATGGTGCGGGCATTGTAAGAAACTGAAACCTGAATATGAG 954 || || |||||||||||||||||||| || |||||||||||| |||| ||||| || ||| Sbjct 240 CTGGTCATGTTCTATGCTCCATGGTGTGGTCATTGTAAGAAATTGAAGCCTGAGTACGAG 299 Query 955 GAAGCAGCTGCCACT-ATG 972 ||| ||||||||| ||| Sbjct 300 -AAG--GCTGCCACTGATG 315 >c343593/f2p26/3306 isoform=c343593;full_length_coverage=2;non_full_length_coverage=26;isoform_length=3306 Length=3306 Score = 76.8 bits (41), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 895 CTTGTGATGTTCTATGCTCCATGGTGCGGGCATTGTAAGAAACTGAAACCTGAATATGAG 954 || || |||||||||||||||||||| || |||||||||||| |||| ||||| || ||| Sbjct 250 CTGGTCATGTTCTATGCTCCATGGTGTGGTCATTGTAAGAAATTGAAGCCTGAGTACGAG 309 Query 955 GAAGCAGCTGCCACT-ATG 972 ||| ||||||||| ||| Sbjct 310 -AAG--GCTGCCACTGATG 325 >c200361/f3p15/3476 isoform=c200361;full_length_coverage=3;non_full_length_coverage=15;isoform_length=3476 Length=3476 Score = 71.3 bits (38), Expect = 4e-11 Identities = 66/79 (84%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 895 CTTGTGATGTTCTATGCTCCATGGTGCGGGCATTGTAAGAAACTGAAACCTGAATATGAG 954 || || |||||||||||||| ||||| || |||||||||||| |||| ||||| || ||| Sbjct 215 CTGGTCATGTTCTATGCTCCGTGGTGTGGTCATTGTAAGAAATTGAAGCCTGAGTACGAG 274 Query 955 GAAGCAGCTGCCACT-ATG 972 ||| ||||||||| ||| Sbjct 275 -AAG--GCTGCCACTGATG 290 >c337232/f4p32/3431 isoform=c337232;full_length_coverage=4;non_full_length_coverage=32;isoform_length=3431 Length=3431 Score = 71.3 bits (38), Expect = 4e-11 Identities = 66/79 (84%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 895 CTTGTGATGTTCTATGCTCCATGGTGCGGGCATTGTAAGAAACTGAAACCTGAATATGAG 954 || || |||||||||||||| ||||| || |||||||||||| |||| ||||| || ||| Sbjct 213 CTGGTCATGTTCTATGCTCCGTGGTGTGGTCATTGTAAGAAATTGAAGCCTGAGTACGAG 272 Query 955 GAAGCAGCTGCCACT-ATG 972 ||| ||||||||| ||| Sbjct 273 -AAG--GCTGCCACTGATG 288 >c337108/f5p33/3489 isoform=c337108;full_length_coverage=5;non_full_length_coverage=33;isoform_length=3489 Length=3489 Score = 71.3 bits (38), Expect = 4e-11 Identities = 66/79 (84%), Gaps = 4/79 (5%) Strand=Plus/Plus Query 895 CTTGTGATGTTCTATGCTCCATGGTGCGGGCATTGTAAGAAACTGAAACCTGAATATGAG 954 || || |||||||||||||| ||||| || |||||||||||| |||| ||||| || ||| Sbjct 233 CTGGTCATGTTCTATGCTCCGTGGTGTGGTCATTGTAAGAAATTGAAGCCTGAGTACGAG 292 Query 955 GAAGCAGCTGCCACT-ATG 972 ||| ||||||||| ||| Sbjct 293 -AAG--GCTGCCACTGATG 308 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 115458227176 Database: SS_all_quivered_hq.fasta Posted date: Feb 25, 2019 4:32 PM Number of letters in database: 76,657,983 Number of sequences in database: 42,166 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5