BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: SS_all_quivered_hq.fasta 42,166 sequences; 76,657,983 total letters Query= 1254 Length=888 Score E Sequences producing significant alignments: (Bits) Value c186701/f2p6/3017isoform=c186701;full_length_coverage=2;non_full_... 1559 0.0 c181112/f2p5/2263isoform=c181112;full_length_coverage=2;non_full_... 1526 0.0 >c186701/f2p6/3017 isoform=c186701;full_length_coverage=2;non_full_length_coverage=6;isoform_length=3017 Length=3017 Score = 1559 bits (844), Expect = 0.0 Identities = 874/888 (98%), Gaps = 3/888 (0%) Strand=Plus/Plus Query 1 ATGGACCAGACCAAACTTCTCAATGTCCTCGCCCTCATCCTGTCTGTGATATCTCCCTCC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 857 ATGGACCAGACCAAACTTCTCAATGTCCTCGCCCTCATCCTGTCTGTGATATCTCCCTCC 916 Query 61 CTCCCCTCCTCCGCCCCCTCCCCCTCCTCCGTCCCCCACTCCAGACAGAAACGTCTCCTC 120 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 917 CTCCCCTCCTCCGCCCCCTCCCACTCCTCCGTCCCCCACTCCCGACAGAAACGTCTCCTC 976 Query 121 TGGATCACCAATGACGGACGGTTGGCTCTTCCACCCGGCACGCATCTGACGATCACTCCT 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 977 TGGATCACAAATGACGGACGGTTGGCTCTTCCACCCGGCACGCATCTGACGATCACTCCT 1036 Query 181 TCGCTGTCACTTCCATTTGTCAGATATCCACCGGATGGGTTCCTGTCCAACATGTCCATC 240 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1037 TCACTGTCACTTCCATTCGTCAGATATCCACCGGATGGGTTCCTGTCCAACATGTCCATC 1096 Query 241 AGTTTGCCGTTTACCGTCGATTTCGATTCGCTCGGTCTCACGGACAACCAGAACCCGTTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1097 AGTTTGCCGTTTACCGTCGATTTCGATTCGCTCGGTCTCACGGACAACCAGAACCCGTTC 1156 Query 301 GGTACCCTGCCTCTCCTCATGGCCCGTAGTATGGGGCGACAGGCTGGGGGTATGTTGGCG 360 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1157 GGTACCCTGCCTCCCCTCATGGCCCGTAGTATGGGGCGACAGGCTGGGGGTATGTTGGCG 1216 Query 361 AGCTACGTGGCAGGTTTACTGGATAGCGGGAAGAGGAGGAGAAGGACGAGGTCCACATCC 420 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1217 AGCTACGTGGCAGAGTTACTGGATAGCGGGAAGAGGAGGAGAAGGACGAGGTCCACATCC 1276 Query 421 ACCGTGAAGAAGCCGAAGAGCGCCCAGTTCCATGGAGGAGAAAGAGCTCTTCTGTACACA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1277 ACCGTGAAGAAGCCGAAGAGCGCCCAGTTCCATGGAGGAGAAAGAGCTCTTCTGTACACA 1336 Query 481 GTAGTGGAGGATCTACTAGCCAATTTCGGTATGGATGGCAGGGCCTGCCTGCTGAGGGCT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1337 GTAGTGGAGGATCTACTAGCCAATTTCGGTATGGATGGCAGGGCCTGCCTGCTGAGGGCT 1396 Query 541 ATCTGTGAGGTGCACGCCCATAACTATCTTCATCGGTTTGGACTTATGGGTGAAATCCTG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1397 ATCTGTGAGGTGCACGCCCATAACTATCTTCATCGGTTTGGACTTATGGGTGAAATCCTG 1456 Query 601 AAGTTATTCTTCACAGTCACCAAATCTCCATACGCGGACCTAATGTCCGACTATGTAGCT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1457 AAGTTATTCTTCACAGTCACCAAATCTCCATACGCGGACCTAATGTCCGACTATGTAGCT 1516 Query 661 GCAGAAAAGAAAGGCAGCTCGACAGGGGAATGTTGGCCCTATTTCAAAGAGTGTCCTAAG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1517 GCAGAAAAGAAAGGCAGCTCGACAGGGGAATGTTGGCCCTATTTCAAAGAGTGTCCTAAG 1576 Query 721 TCATTGTTTCAAAGCAGTAGCCATAATAAATATAGTGAGAATTCCACGGAAGGTGATATC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1577 TCATTGTTTCAAAGCAGTAGCCATAATAAATATAGTGAGAATTCCACGGAAGGTGATATC 1636 Query 781 GAAGTGGAAGAGAACGAGATAAGGGAGGAGGAGGAGGAAGAGGAGGTGCACGCAGACGAA 840 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1637 GAAGTGGAAGAGAACGAGATAAG---GGAGGAGGAGGAAGAGGAGGTGCACGCAGACGAA 1693 Query 841 ACCAGTGAGAGGACGAGGGAAACGGTGGGAGAGAAGTATGTCATGTGA 888 || ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1694 ACTAGTGAGAGGACGAGGGAGACGGTGGGAGAGAAGTACGTCATGTGA 1741 >c181112/f2p5/2263 isoform=c181112;full_length_coverage=2;non_full_length_coverage=5;isoform_length=2263 Length=2263 Score = 1526 bits (826), Expect = 0.0 Identities = 868/888 (98%), Gaps = 3/888 (0%) Strand=Plus/Plus Query 1 ATGGACCAGACCAAACTTCTCAATGTCCTCGCCCTCATCCTGTCTGTGATATCTCCCTCC 60 |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 857 ATGGACCACACCAGACTTCTCAATGTCCTCGCCCTCATCCTGTCTGTGATATCTCCCTCT 916 Query 61 CTCCCCTCCTCCGCCCCCTCCCCCTCCTCCGTCCCCCACTCCAGACAGAAACGTCTCCTC 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 917 CTCCCCTCCTCCGCCCCCTCCCCCTCCTCCGTCCCCCACTCCCGACAGAAACGTCTCCTC 976 Query 121 TGGATCACCAATGACGGACGGTTGGCTCTTCCACCCGGCACGCATCTGACGATCACTCCT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 977 TGGATCACCAATGACGGACGGTTGGCTCTTCCACCCGGCACGCATCTGACGATCACTCCT 1036 Query 181 TCGCTGTCACTTCCATTTGTCAGATATCCACCGGATGGGTTCCTGTCCAACATGTCCATC 240 || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 1037 TCACTGTCACTTCCATTCGTCAGATATCCACCGGACGGGTTCCTGTCCAACATGTCCATC 1096 Query 241 AGTTTGCCGTTTACCGTCGATTTCGATTCGCTCGGTCTCACGGACAACCAGAACCCGTTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1097 AGTTTGCCGTTTACCGTCGATTTCGATTCGCTCGGTCTCACGGACAACCAGAACCCGTTC 1156 Query 301 GGTACCCTGCCTCTCCTCATGGCCCGTAGTATGGGGCGACAGGCTGGGGGTATGTTGGCG 360 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1157 GGTACCCTGCCTCCCCTCATGGCCCGTAGTATGGGGCGACAGGCTGGGGGTATGTTGGCG 1216 Query 361 AGCTACGTGGCAGGTTTACTGGATAGCGGGAAGAGGAGGAGAAGGACGAGGTCCACATCC 420 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1217 AGCTACGTGGCAGAGTTACTGGATAGCGGGAAGAGAAGGAGAAGGACGAGGTCCACATCC 1276 Query 421 ACCGTGAAGAAGCCGAAGAGCGCCCAGTTCCATGGAGGAGAAAGAGCTCTTCTGTACACA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1277 ACCGTGAAGAAGCCGAAGAGCGCCCAGTTCCATGGAGGAGAAAGAGCTCTTCTGTACACA 1336 Query 481 GTAGTGGAGGATCTACTAGCCAATTTCGGTATGGATGGCAGGGCCTGCCTGCTGAGGGCT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1337 GTAGTGGAGGATCTACTAGCCAATTTCGGTATGGATGGCAGGGCCTGCCTGCTGAGGGCT 1396 Query 541 ATCTGTGAGGTGCACGCCCATAACTATCTTCATCGGTTTGGACTTATGGGTGAAATCCTG 600 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1397 ATCTGTGAGGTGCACGCCCATAACTATCTCCATCGGTTTGGACTTATGGGTGAAATCCTG 1456 Query 601 AAGTTATTCTTCACAGTCACCAAATCTCCATACGCGGACCTAATGTCCGACTATGTAGCT 660 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 1457 AAGTTATTCTTCACAGTCACCAAATCTCCATACGCAGACCTAATGTCCGACTATGTGGCT 1516 Query 661 GCAGAAAAGAAAGGCAGCTCGACAGGGGAATGTTGGCCCTATTTCAAAGAGTGTCCTAAG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1517 GCAGAAAAGAAAGGCAGCTCGACAGGGGAATGTTGGCCCTATTTCAAAGAGTGTCCTAAG 1576 Query 721 TCATTGTTTCAAAGCAGTAGCCATAATAAATATAGTGAGAATTCCACGGAAGGTGATATC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1577 TCATTGTTTCAAAGCAGTAGCCATAATAAATATAGTGAGAATTCCACGGAAGGTGATATC 1636 Query 781 GAAGTGGAAGAGAACGAGATAAGGGAGGAGGAGGAGGAAGAGGAGGTGCACGCAGACGAA 840 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1637 GAAGTGGAAGAGAACGAGATAAG---GGAGGAGGAGGAAGAGGAGGTGCACGCAGACGAA 1693 Query 841 ACCAGTGAGAGGACGAGGGAAACGGTGGGAGAGAAGTATGTCATGTGA 888 || ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1694 ACTAGTGAGAGGACGAGGGAGACGGTGGGAGAGAAGTACGTCATGTGA 1741 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65134156954 Database: SS_all_quivered_hq.fasta Posted date: Feb 25, 2019 4:32 PM Number of letters in database: 76,657,983 Number of sequences in database: 42,166 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5