BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Dcitr_OGSv2.0_pep.fa
           25,292 sequences; 11,360,065 total letters



Query= Untitled_sequence

Length=130
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcitrP077150.1.1KRTCAP2-like protein (AHRD V3.11 *** tr|A0A067R3E...  167     7e-55
DcitrP077155.1.1RNA-directed DNA polymerase from mobile element j...  167     2e-51


>DcitrP077150.1.1 KRTCAP2-like protein (AHRD V3.11 *** tr|A0A067R3E8|A0A067R3E8_ZOONE). 
Similar to MCOT14199.2.CC XP_008487139.1. AED 0.07| 
InterPro:IPR018614,Pfam:PF09775
Length=134

 Score = 167 bits (424),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 78/132 (59%), Positives = 103/132 (78%), Gaps = 2/132 (2%)

Query  1    MAMSSGMSFIMSSVLAVLLFSGMQMYRQWLASSQIQTILGGYLGSLLFILSLTAVGNVQA  60
            MA+S+G SF++S +L V++FSGMQMYRQWL+SSQ+ TILGG LGSL F+ SLT +GN+++
Sbjct  1    MALSNGNSFLISLILTVIIFSGMQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLES  60

Query  61   ALFGKGFQIKLFPEVFICFLVALFSSGMVHRVCITTCFIFSTVSLYYINRISQKTY--SA  118
             +FGK FQ KLFPEV +C L A+ ++GMVHRVC T+C +FS + LYY+NRISQK +    
Sbjct  61   TIFGKNFQTKLFPEVILCMLGAVMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVHVQPI  120

Query  119  VHHSAPLGKKKK  130
            +  S P G KKK
Sbjct  121  IQASQPTGGKKK  132


>DcitrP077155.1.1 RNA-directed DNA polymerase from mobile element jockey (AHRD 
V3.11 *-* tr|A0A146MDJ5|A0A146MDJ5_LYGHE). AED 0.43
Length=398

 Score = 167 bits (423),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 77/131 (59%), Positives = 102/131 (78%), Gaps = 2/131 (2%)

Query  2    AMSSGMSFIMSSVLAVLLFSGMQMYRQWLASSQIQTILGGYLGSLLFILSLTAVGNVQAA  61
            A+S+G SF++S +L V++FSGMQMYRQWL+SSQ+ TILGG LGSL F+ SLT +GN+++ 
Sbjct  266  ALSNGNSFLISLILTVIIFSGMQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLEST  325

Query  62   LFGKGFQIKLFPEVFICFLVALFSSGMVHRVCITTCFIFSTVSLYYINRISQKTY--SAV  119
            +FGK FQ KLFPEV +C L A+ ++GMVHRVC T+C +FS + LYY+NRISQK +    +
Sbjct  326  IFGKNFQTKLFPEVILCMLGAVMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVHVQPII  385

Query  120  HHSAPLGKKKK  130
              S P G KKK
Sbjct  386  QASQPTGGKKK  396



Lambda      K        H        a         alpha
   0.330    0.138    0.407    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 393865423


  Database: Dcitr_OGSv2.0_pep.fa
    Posted date:  Mar 4, 2018 10:37 PM
  Number of letters in database: 11,360,065
  Number of sequences in database:  25,292



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40