BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Diaci_v2.0.ref.fasta 1,906 sequences; 498,892,910 total letters Query= DcMCO6 Length=1914 Score E Sequences producing significant alignments: (Bits) Value ScVcwli_620 451 1e-124 ScVcwli_2906 75.0 3e-11 >ScVcwli_620 Length=3228208 Score = 451 bits (244), Expect = 1e-124 Identities = 244/244 (100%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1478 TTGGTCCCACTTCCACGTTCCTTCACCCAATGCACCTACACGGCACAGATATCTACATCA 1537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207410 TTGGTCCCACTTCCACGTTCCTTCACCCAATGCACCTACACGGCACAGATATCTACATCA 207351 Query 1538 TCGAGCAGGGCATCATTCCAGTCGCTGAAGACCATCGGGCATTCGTTGGGAAACTGCAAG 1597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207350 TCGAGCAGGGCATCATTCCAGTCGCTGAAGACCATCGGGCATTCGTTGGGAAACTGCAAG 207291 Query 1598 AGCGTCTGGCCAGGGAGGGACCTGACTTGGCGACAAAGATTCGGCCGCAACCCTGCGTGA 1657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207290 AGCGTCTGGCCAGGGAGGGACCTGACTTGGCGACAAAGATTCGGCCGCAACCCTGCGTGA 207231 Query 1658 AAGACACGGTCACCATACCACCCAATGGATATACGGTGGTGCGAGTACACTTCAACAATC 1717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207230 AAGACACGGTCACCATACCACCCAATGGATATACGGTGGTGCGAGTACACTTCAACAATC 207171 Query 1718 CTGG 1721 |||| Sbjct 207170 CTGG 207167 Score = 422 bits (228), Expect = 8e-116 Identities = 228/228 (100%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 1250 AATCCTCGCCGAACGTAATCAAAACGCACGTGACCAACAACATCAGTCTGGGTATCCTTC 1309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207935 AATCCTCGCCGAACGTAATCAAAACGCACGTGACCAACAACATCAGTCTGGGTATCCTTC 207876 Query 1310 CGTTTCCCATCCTATCCCAGGATCTGCCAATCCCGAAAGAGATGGAGTGTCCCAAAGACA 1369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207875 CGTTTCCCATCCTATCCCAGGATCTGCCAATCCCGAAAGAGATGGAGTGTCCCAAAGACA 207816 Query 1370 GGTCCGTGTGCGGAAAAAGCGCCGAAAAAGGTGGCAAACTGTGCGAGTGTGTCGAAATCA 1429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207815 GGTCCGTGTGCGGAAAAAGCGCCGAAAAAGGTGGCAAACTGTGCGAGTGTGTCGAAATCA 207756 Query 1430 TCAAAGTCGGCCTCAACCAAGTGGCGGAGATCATCTTTATTGATTGGA 1477 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207755 TCAAAGTCGGCCTCAACCAAGTGGCGGAGATCATCTTTATTGATTGGA 207708 Score = 409 bits (221), Expect = 6e-112 Identities = 225/227 (99%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 441 AGGATTTCAAAAGATGGACGGTCTCGAAGGGCCGCTCGTCATTCGTCGGCCAAAGAAGGC 500 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 212336 AGGATTTCAAAAGATGGACGGTCTTGAAGGGCCGCTCGTCATTCGTCGGCCGAAGAAGGC 212277 Query 501 CGATCCGAATCGGGACCAGTACGATACGGACTATCCCTCGCATACGATCATCATCACGGA 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 212276 CGATCCGAATCGGGACCAGTACGATACGGACTATCCCTCGCATACGATCATCATCACGGA 212217 Query 561 TTGGCTGCACGGAATGACGGACGCCAAGTTCCCGGGTAACACATATGCTAACTTTGGAAC 620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 212216 TTGGCTGCACGGAATGACGGACGCCAAGTTCCCGGGTAACACATATGCTAACTTTGGAAC 212157 Query 621 GCGAACGGAATCCTTCCTCATCAACGGACGAAGTGTGTTCAAATCGG 667 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 212156 GCGAACGGAATCCTTCCTCATCAACGGACGAAGTGTGTTCAAATCGG 212110 Score = 387 bits (209), Expect = 3e-105 Identities = 209/209 (100%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 1041 GAGTTTGAACGCTCTGGACTCTTCGGACTGTTCCGACACGAACCCGAACGTCTGCTGGAA 1100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 208655 GAGTTTGAACGCTCTGGACTCTTCGGACTGTTCCGACACGAACCCGAACGTCTGCTGGAA 208596 Query 1101 CCACGTCAACTCCCTCACACCGGCCACGGAGAAAGCGACAGTCCTGAAAGCGGTTCCCGA 1160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 208595 CCACGTCAACTCCCTCACACCGGCCACGGAGAAAGCGACAGTCCTGAAAGCGGTTCCCGA 208536 Query 1161 CATCCGGCTGGTGTTCGCCGTCGATGAGTACCACTTCACACGGGACTCGCTGTTCTGGAA 1220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 208535 CATCCGGCTGGTGTTCGCCGTCGATGAGTACCACTTCACACGGGACTCGCTGTTCTGGAA 208476 Query 1221 CGACGAGGACGAGTATCATCGTTGGTTCC 1249 ||||||||||||||||||||||||||||| Sbjct 208475 CGACGAGGACGAGTATCATCGTTGGTTCC 208447 Score = 387 bits (209), Expect = 3e-105 Identities = 209/209 (100%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 1041 GAGTTTGAACGCTCTGGACTCTTCGGACTGTTCCGACACGAACCCGAACGTCTGCTGGAA 1100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 209615 GAGTTTGAACGCTCTGGACTCTTCGGACTGTTCCGACACGAACCCGAACGTCTGCTGGAA 209556 Query 1101 CCACGTCAACTCCCTCACACCGGCCACGGAGAAAGCGACAGTCCTGAAAGCGGTTCCCGA 1160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 209555 CCACGTCAACTCCCTCACACCGGCCACGGAGAAAGCGACAGTCCTGAAAGCGGTTCCCGA 209496 Query 1161 CATCCGGCTGGTGTTCGCCGTCGATGAGTACCACTTCACACGGGACTCGCTGTTCTGGAA 1220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 209495 CATCCGGCTGGTGTTCGCCGTCGATGAGTACCACTTCACACGGGACTCGCTGTTCTGGAA 209436 Query 1221 CGACGAGGACGAGTATCATCGTTGGTTCC 1249 ||||||||||||||||||||||||||||| Sbjct 209435 CGACGAGGACGAGTATCATCGTTGGTTCC 209407 Score = 387 bits (209), Expect = 3e-105 Identities = 213/215 (99%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 229 CAGGTGTGTCGCGGTGACACGATCGTAGTGGATGTGAAGAACAAGATAGTGGATCGAGTG 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213065 CAGGTGTGTCGCGGTGACACGATCGTAGTGGATGTGAAGAACAAGATAGTGGATCGAGTG 213006 Query 289 GTCACCATCCACTGGCATGGAGTGTACCAGAGACACACCCCTCACTCGGATGGCGTACCA 348 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213005 GTCACCATCCACTGGCATGGAGTGTACCAGAGACACACCCCTCACTCGGATGGCGTACCG 212946 Query 349 TTACTTACCCAATGCCCTATCATACCGGAGACTACATACCGGTACAAGTTCCCCGCTATG 408 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 212945 TTACTTACCCAATGCCCTATCATACCGGAGACTACATACCGGTATAAGTTCCCCGCTATG 212886 Query 409 CCCTATGGAACGTTCTTCTATCACTCCCATATAGG 443 ||||||||||||||||||||||||||||||||||| Sbjct 212885 CCCTATGGAACGTTCTTCTATCACTCCCATATAGG 212851 Score = 374 bits (202), Expect = 2e-101 Identities = 202/202 (100%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 666 GGGCAATGGAACATCAAACCCCGTGCCTTACTCCAAGTTCAAGGTCAACAAAGGGCTCCG 725 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 211720 GGGCAATGGAACATCAAACCCCGTGCCTTACTCCAAGTTCAAGGTCAACAAAGGGCTCCG 211661 Query 726 TCACAGATTTCGAATCATCGGGGGTTCCTGTTTGGCCTGCCCCATGTTGTTCTTTGTCGA 785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 211660 TCACAGATTTCGAATCATCGGGGGTTCCTGTTTGGCCTGCCCCATGTTGTTCTTTGTCGA 211601 Query 786 GAAGCATCGCATGAATCTGATCACGGTGGACGGAACCCCGGTACAACCTCAGATGTTTGA 845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 211600 GAAGCATCGCATGAATCTGATCACGGTGGACGGAACCCCGGTACAACCTCAGATGTTTGA 211541 Query 846 CTCCATTACTATTTTTCCTGGT 867 |||||||||||||||||||||| Sbjct 211540 CTCCATTACTATTTTTCCTGGT 211519 Score = 350 bits (189), Expect = 4e-94 Identities = 193/195 (99%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 1720 GGAATTTGGATCATGCACTGTCATTTCATCTTCCACACGGAGACGGGCATGAACACGGTA 1779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 206707 GGAATTTGGATCATGCACTGTCATTTCATCTTCCACACGGAGACGGGCATGAACACGGTA 206648 Query 1780 TTCCAAGTGGGAGACCGCAAGGATTTTGTCCAGACGCCTCCTGAATTTCCGACCTGCAAC 1839 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 206647 TTCCAAGTGGGAGACCGCAAGGATTTCGTCCAGACGCCTCCTGAATTTCCGACCTGCAAC 206588 Query 1840 AACTACCTGCCACCCGTAGATCCAAACGAGTTCAAAAATATTGACTGGGATGACGAGCCG 1899 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 206587 AACTACCTGCCACCCGTAGATCCAAACGAGTTCAAAAATATCGACTGGGATGACGAGCCG 206528 Query 1900 ACCTTACAGACGTGA 1914 ||||||||||||||| Sbjct 206527 ACCTTACAGACGTGA 206513 Score = 322 bits (174), Expect = 8e-86 Identities = 183/187 (98%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 855 TATTTTTCCTGGTGATCGTATGGATGTCGTGATCACAGCAAATCAGTCAGGCGGTTCATT 914 ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210377 TATATTT-CAGGTGATCGTATGGATGTCGTGATCACAGCAAATCAGTCAGGCGGTTCATT 210319 Query 915 CTGGATACAAGTGAGGACTTTGTGTACTCCCAATGTTTCCGCGGAAGCCATCCTAGAATA 974 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210318 CTGGATACAAGTGAGGACTTTGTGTACTCCCAATGTTTCCGCGGAAGCCATCCTAGAATA 210259 Query 975 TAGCGACGGCAATGGCACTAAGGAGCAATCAACTCGGCCAGCCTTCGACGCCTATCCTAG 1034 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210258 TAGCGACGGTAATGGCACTAAGGAGCAATCAACTCGGCCAGCCTTCGACGCCTATCCTAG 210199 Query 1035 AGGAAGG 1041 ||||||| Sbjct 210198 AGGAAGG 210192 Score = 322 bits (174), Expect = 8e-86 Identities = 183/187 (98%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 855 TATTTTTCCTGGTGATCGTATGGATGTCGTGATCACAGCAAATCAGTCAGGCGGTTCATT 914 ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 211045 TATATTT-CAGGTGATCGTATGGATGTCGTGATCACAGCAAATCAGTCAGGCGGTTCATT 210987 Query 915 CTGGATACAAGTGAGGACTTTGTGTACTCCCAATGTTTCCGCGGAAGCCATCCTAGAATA 974 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210986 CTGGATACAAGTGAGGACTTTGTGTACTCCCAATGTTTCCGCGGAAGCCATCCTAGAATA 210927 Query 975 TAGCGACGGCAATGGCACTAAGGAGCAATCAACTCGGCCAGCCTTCGACGCCTATCCTAG 1034 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210926 TAGCGACGGTAATGGCACTAAGGAGCAATCAACTCGGCCAGCCTTCGACGCCTATCCTAG 210867 Query 1035 AGGAAGG 1041 ||||||| Sbjct 210866 AGGAAGG 210860 Score = 233 bits (126), Expect = 4e-59 Identities = 126/126 (100%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 108 AGCATGTGGTAACTGTATTAACGGAACTATGGACGATTGTTTTAAGAAAGGTTGCGTCAC 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213632 AGCATGTGGTAACTGTATTAACGGAACTATGGACGATTGTTTTAAGAAAGGTTGCGTCAC 213573 Query 168 GGCTGATGGAGTAGAGCGACCCATTTTGACCATCAACAGACGTCTGCCTTCACCCTCCAT 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213572 GGCTGATGGAGTAGAGCGACCCATTTTGACCATCAACAGACGTCTGCCTTCACCCTCCAT 213513 Query 228 TCAGGT 233 |||||| Sbjct 213512 TCAGGT 213507 Score = 193 bits (104), Expect = 7e-47 Identities = 106/107 (99%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1 ATGGAGGAGGCCGAGAAGATCGGCCTATGTGCCCGGCCTTGTGACGGAGCCAAACCGATG 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 214211 ATGGAGGAGGCTGAGAAGATCGGCCTATGTGCCCGGCCTTGTGACGGAGCCAAACCGATG 214152 Query 61 GTTTGCTACTATCACTTCACCCTGGAAAACTATGCCACTATTGGACC 107 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 214151 GTTTGCTACTATCACTTCACCCTGGAAAACTATGCCACTATTGGACC 214105 Score = 100 bits (54), Expect = 4e-19 Identities = 54/54 (100%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 1250 AATCCTCGCCGAACGTAATCAAAACGCACGTGACCAACAACATCAGTCTGGGTA 1303 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 208895 AATCCTCGCCGAACGTAATCAAAACGCACGTGACCAACAACATCAGTCTGGGTA 208842 >ScVcwli_2906 Length=1271160 Score = 75.0 bits (40), Expect = 3e-11 Identities = 83/104 (80%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 5 AGGAGGCCGAGAAG-ATCGGCCTATGTGCCCGGCCTTGTGACGGAGCCAAACCGATGGTT 63 |||||||||| ||| | || |||| |||| |||||||| ||||||| || ||||| Sbjct 694167 AGGAGGCCGA-AAGCAGGGGGATATGCACCCGCCCTTGTGATGGAGCCACCCCCATGGTC 694225 Query 64 TGCTACTATCACTTCACCCTGGAAAACTATGCCACTATTGGACC 107 ||||| ||||| ||||| |||| |||||||||||| | ||||| Sbjct 694226 TGCTATTATCATTTCACGTTGGAGAACTATGCCACTGTCGGACC 694269 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 940308943860 Database: Diaci_v2.0.ref.fasta Posted date: Mar 4, 2018 10:37 PM Number of letters in database: 498,892,910 Number of sequences in database: 1,906 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5