TBLASTN 2.6.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: Cclementina_182_v1.0.cds_annot.fasta
           33,929 sequences; 42,155,496 total letters



Query= sp|Q69P88|DRO1_ORYSJ

Length=308
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Ciclev10027453m  similar to AT1G72490.1                               83.6    2e-18


>Ciclev10027453m similar to AT1G72490.1
Length=855

 Score = 83.6 bits (205),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 117/253 (46%), Gaps = 46/253 (18%)
 Frame = +1

Query  94   KDEFSDWPQSLLAIGTFGNK---------QIEEVAQVENSSDNVQSVQDTVKFTEEEVDK  144
            ++EF+DWP+ LLAIGTFGN             E+  +++  +   S  D   FT EE+ K
Sbjct  85   REEFNDWPRGLLAIGTFGNNPEINNNKGNNDSEIQNIQDDQEEASSSIDLQDFTPEEIGK  264

Query  145  IRKEFETLLAIKDQAEAQRS----------HDDDQVGLQKR---------ADGEDNEKHI  185
              KE   LL  K   + ++           +    + + +R         +D   N+ H 
Sbjct  265  FEKELTKLLRRKPNLDKEKKVASLPLDRFLNCPSSLEVDRRISNAICNEISDDHHNKDHD  444

Query  186  RQLINKR--------IIVsksknslgkkgnTLKPRSVASLLK-LFMCKGGFTSVVPEP--  234
             Q I           I+              +  +S++ LLK +F+C+ GF    P+P  
Sbjct  445  NQDIKDEDIDRTISVILGRCKDIRADSSKKAIGKKSISFLLKKMFVCRSGF---APQPSL  615

Query  235  RNTFPQSRMEKLLKAILQKKIHPQNSSTLVA-KRHLDWKPDETEINECLED---ALRDLD  290
            R++  +SRME+ L+ +L KK++PQN+S   + K++L+     +      ED    L+  +
Sbjct  616  RDSLQESRMERFLRIMLHKKMNPQNASRAPSMKKYLEDTKQASNNKNGTEDDREKLQGKN  795

Query  291  DDGAKWVKTDSEY  303
             +G KWVKTDSE+
Sbjct  796  KEGCKWVKTDSEW  834



Lambda      K        H        a         alpha
   0.313    0.129    0.370    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2217057856


  Database: Cclementina_182_v1.0.cds_annot.fasta
    Posted date:  Jul 14, 2015 11:36 AM
  Number of letters in database: 42,155,496
  Number of sequences in database:  33,929



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40