BLASTP 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Dcitr_OGSv2.0_pep.fa 25,292 sequences; 11,360,065 total letters Query= Untitled_sequence Length=530 Score E Sequences producing significant alignments: (Bits) Value DcitrP030010.1.1 Protein Skeletor, isoforms B/C (AHRD V3.11 *-* ... 1095 0.0 DcitrP064315.1.3 Protein Skeletor, isoforms D/E (AHRD V3.11 *-* ... 581 0.0 DcitrP064315.1.2 Protein Skeletor, isoforms D/E (AHRD V3.11 *-* ... 581 0.0 DcitrP064315.1.1 Protein Skeletor, isoforms D/E (AHRD V3.11 *-* ... 581 0.0 DcitrP082815.1.1 Protein Skeletor, isoforms B/C-like Protein (AH... 234 9e-72 DcitrP100135.1.1 Protein Skeletor, isoforms B/C (AHRD V3.11 *** ... 220 2e-62 >DcitrP030010.1.1 Protein Skeletor, isoforms B/C (AHRD V3.11 *-* tr|A0A0A9Z9K5|A0A0A9Z9K5_LYGHE). Similar to MCOT13813.1.CT. AED 0.00 Length=530 Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/530 (100%), Positives = 530/530 (100%), Gaps = 0/530 (0%) Query 1 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD 60 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD Sbjct 1 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD 60 Query 61 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW 120 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW Sbjct 61 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW 120 Query 121 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD 180 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD Sbjct 121 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD 180 Query 181 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT 240 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT Sbjct 181 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT 240 Query 241 VDFGHIQIPANVNMPPSLKMLGVSPQTNLVGQNVVNKIIEKVNVLFSIDRSSSSSNVYQH 300 VDFGHIQIPANVNMPPSLKMLGVSPQTNLVGQNVVNKIIEKVNVLFSIDRSSSSSNVYQH Sbjct 241 VDFGHIQIPANVNMPPSLKMLGVSPQTNLVGQNVVNKIIEKVNVLFSIDRSSSSSNVYQH 300 Query 301 LALLQQSSLCNVQPTIPAQRQSTTIFHSFQQQYHYQFPQQSQNPFIQNQFLQPNIFSQPA 360 LALLQQSSLCNVQPTIPAQRQSTTIFHSFQQQYHYQFPQQSQNPFIQNQFLQPNIFSQPA Sbjct 301 LALLQQSSLCNVQPTIPAQRQSTTIFHSFQQQYHYQFPQQSQNPFIQNQFLQPNIFSQPA 360 Query 361 YSTNTKKYEEENSQLNTFPRPLPTKNSQEQTFVPSFSTFPSSDQSHLSQNYPFNLQNPQA 420 YSTNTKKYEEENSQLNTFPRPLPTKNSQEQTFVPSFSTFPSSDQSHLSQNYPFNLQNPQA Sbjct 361 YSTNTKKYEEENSQLNTFPRPLPTKNSQEQTFVPSFSTFPSSDQSHLSQNYPFNLQNPQA 420 Query 421 FLVNQQYEQNNPLLTSQDQTSIYKTQDVQQLISSLPQNPHRLGPVNNHQAKPQSQKKDKV 480 FLVNQQYEQNNPLLTSQDQTSIYKTQDVQQLISSLPQNPHRLGPVNNHQAKPQSQKKDKV Sbjct 421 FLVNQQYEQNNPLLTSQDQTSIYKTQDVQQLISSLPQNPHRLGPVNNHQAKPQSQKKDKV 480 Query 481 TTYKPPTLDIHRFITKPPTIISRKSEEINKPDSFSKNVNITKRDTRKKQL 530 TTYKPPTLDIHRFITKPPTIISRKSEEINKPDSFSKNVNITKRDTRKKQL Sbjct 481 TTYKPPTLDIHRFITKPPTIISRKSEEINKPDSFSKNVNITKRDTRKKQL 530 >DcitrP064315.1.3 Protein Skeletor, isoforms D/E (AHRD V3.11 *-* tr|A0A0A9ZDX9|A0A0A9ZDX9_LYGHE). Similar to MCOT18004.0.CT. AED 0.22 Length=1643 Score = 581 bits (1497), Expect = 0.0, Method: Compositional matrix adjust. Identities = 267/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%) Query 1 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD 60 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD Sbjct 1 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD 60 Query 61 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW 120 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW Sbjct 61 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW 120 Query 121 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD 180 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD Sbjct 121 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD 180 Query 181 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT 240 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT Sbjct 181 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT 240 Query 241 VDFGHIQIPANVNMPPSLKMLGVSPQTNL 269 VDFGHIQIPANVNMPPSLKMLGVSPQ+ L Sbjct 241 VDFGHIQIPANVNMPPSLKMLGVSPQSKL 269 >DcitrP064315.1.2 Protein Skeletor, isoforms D/E (AHRD V3.11 *-* tr|A0A0A9ZDX9|A0A0A9ZDX9_LYGHE). Similar to MCOT18004.0.CT. AED 0.23 Length=1643 Score = 581 bits (1497), Expect = 0.0, Method: Compositional matrix adjust. Identities = 267/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%) Query 1 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD 60 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD Sbjct 1 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD 60 Query 61 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW 120 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW Sbjct 61 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW 120 Query 121 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD 180 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD Sbjct 121 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD 180 Query 181 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT 240 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT Sbjct 181 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT 240 Query 241 VDFGHIQIPANVNMPPSLKMLGVSPQTNL 269 VDFGHIQIPANVNMPPSLKMLGVSPQ+ L Sbjct 241 VDFGHIQIPANVNMPPSLKMLGVSPQSKL 269 >DcitrP064315.1.1 Protein Skeletor, isoforms D/E (AHRD V3.11 *-* tr|A0A0A9ZDX9|A0A0A9ZDX9_LYGHE). Similar to MCOT18004.0.CT. AED 0.23 Length=1643 Score = 581 bits (1497), Expect = 0.0, Method: Compositional matrix adjust. Identities = 267/269 (99%), Positives = 268/269 (99%), Gaps = 0/269 (0%) Query 1 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD 60 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD Sbjct 1 MVLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYD 60 Query 61 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW 120 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW Sbjct 61 GQGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIW 120 Query 121 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD 180 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD Sbjct 121 CESAAVNFGDVRIPKGFDFPRPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD 180 Query 181 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT 240 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT Sbjct 181 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT 240 Query 241 VDFGHIQIPANVNMPPSLKMLGVSPQTNL 269 VDFGHIQIPANVNMPPSLKMLGVSPQ+ L Sbjct 241 VDFGHIQIPANVNMPPSLKMLGVSPQSKL 269 >DcitrP082815.1.1 Protein Skeletor, isoforms B/C-like Protein (AHRD V3.11 *** tr|D6X0N5|D6X0N5_TRICA). Similar to MCOT23173.2.CO. AED 0.22 Length=412 Score = 234 bits (597), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 107/239 (45%), Positives = 149/239 (62%), Gaps = 5/239 (2%) Query 25 YYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYDGQGPAAYFWAGSSSQPDASGFAL- 83 YYG+ IG L+ Y H+++G VYA D TL I+ F+YDG GP AYFW G S++P G + Sbjct 45 YYGRLIGTLKDYAHNIRGTVYATDENTLFIKSFSYDGTGPDAYFWVGKSARPSPEGIIVP 104 Query 84 ---RDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIWCESAAVNFGDVRIPKGFDFP 140 + ++ LKAY+K + LP G + IKW S+WC VNFGD+ IP D P Sbjct 105 YPEGNYQRDPPVLKAYQKADIIFKLPNGMRIKDIKWLSVWCRRFTVNFGDIFIPPNLDVP 164 Query 141 RPQKIGQLAGV-HGVSSDPIVIVDAQTLLVPNFSYDGEAPDAKFWVGTGPHPSPQGIRVP 199 RP+ + + + HG+ S I I+DA+T +PN YDG PDA FWVG G PSP GI+VP Sbjct 165 RPRVLPEFKRLAHGLRSGNITILDARTFYIPNLHYDGAGPDAYFWVGNGSEPSPLGIKVP 224 Query 200 DENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFTVDFGHIQIPANVNMPPSL 258 +E G EPL+ Y + I + LPG LTV++I +WC + +FGH+ IP ++++PP+L Sbjct 225 NEIGSLEPLKGYQGEDIEIQLPGNLTVYDIDWLAMWCVQYRHNFGHVMIPRDLDVPPAL 283 >DcitrP100135.1.1 Protein Skeletor, isoforms B/C (AHRD V3.11 *** tr|A0A0A9XRG9|A0A0A9XRG9_LYGHE). AED 0.12 Length=946 Score = 220 bits (560), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 113/258 (44%), Positives = 158/258 (61%), Gaps = 2/258 (1%) Query 2 VLTPLHCWLLISAIFASVHGAYNYYGKYIGALRGYHHSVQGEVYAVDARTLHIRDFTYDG 61 VL+ W+L+ I + Y GK IG + YHH V GEVYAV+ TL + F YDG Sbjct 5 VLSYNIVWILLWGI-PLLWAGEPYRGKPIGKINSYHHQVGGEVYAVNEYTLLLSQFNYDG 63 Query 62 QGPAAYFWAGSSSQPDASGFALRDERQSTTELKAYRKKHVTLTLPEGKSLTQIKWFSIWC 121 G +FWAG+S +P GF + DE T L Y K T+TLP+ K +T+IKWF+++ Sbjct 64 LGVDTFFWAGTSPRPGPQGFLVTDEHGKTNVLHRYLNKDFTITLPDNKKITEIKWFAVYD 123 Query 122 ESAAVNFGDVRIPKGFDFPRPQKIGQLA-GVHGVSSDPIVIVDAQTLLVPNFSYDGEAPD 180 + FGDV IP+ F+ P Q I QL+ HGVSS + ++DA+T+++P F+Y+G D Sbjct 124 LTKHNTFGDVYIPEEFEPPARQIITQLSRRSHGVSSGSVELIDAKTIIIPEFTYNGAGKD 183 Query 181 AKFWVGTGPHPSPQGIRVPDENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFT 240 FWVG GP PS +G +VPDE G +PLR Y+ +TI L LPG+LT+F+I ++ Sbjct 184 TYFWVGVGPQPSSKGFKVPDEYGYLDPLRIYSNETIQLELPGDLTIFDIDWLSIYDVETG 243 Query 241 VDFGHIQIPANVNMPPSL 258 +FG + IP + N+PPSL Sbjct 244 ENFGSVIIPDSPNVPPSL 261 Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 71/158 (45%), Gaps = 0/158 (0%) Query 141 RPQKIGQLAGVHGVSSDPIVIVDAQTLLVPNFSYDGEAPDAKFWVGTGPHPSPQGIRVPD 200 R + IG++ H + V+ TLL+ F+YDG D FW GT P P PQG V D Sbjct 28 RGKPIGKINSYHHQVGGEVYAVNEYTLLLSQFNYDGLGVDTFFWAGTSPRPGPQGFLVTD 87 Query 201 ENGKEEPLRRYNRKTIVLTLPGELTVFEIGHFGVWCEAFTVDFGHIQIPANVNMPPSLKM 260 E+GK L RY K +TLP + EI F V+ FG + IP P + Sbjct 88 EHGKTNVLHRYLNKDFTITLPDNKKITEIKWFAVYDLTKHNTFGDVYIPEEFEPPARQII 147 Query 261 LGVSPQTNLVGQNVVNKIIEKVNVLFSIDRSSSSSNVY 298 +S +++ V V I K ++ + + + Y Sbjct 148 TQLSRRSHGVSSGSVELIDAKTIIIPEFTYNGAGKDTY 185 Lambda K H a alpha 0.316 0.132 0.398 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 3718850922 Database: Dcitr_OGSv2.0_pep.fa Posted date: Mar 4, 2018 10:37 PM Number of letters in database: 11,360,065 Number of sequences in database: 25,292 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40