BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitri_transcriptome.fasta
           60,261 sequences; 104,618,276 total letters



Query= Untitled_sequence

Length=3069
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcDTr03357.1Unknown protein                                           198     5e-49


>DcDTr03357.1 Unknown protein
Length=410

 Score = 198 bits (107),  Expect = 5e-49
 Identities = 111/113 (98%), Gaps = 0/113 (0%)
 Strand=Plus/Minus

Query  2432  TGAGAGATTTCAGTCCTATGACGCTCCTAGTGGATTTTTCTCGCCGCTATGGGTCCCACA  2491
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  356   TGAGAGATTTCAGTCCTATGACGCTTCTAGTGGATTTTTCTCGCCGCTATGGGTCCCACA  297

Query  2492  GGGGTTTTGGGAATGTTGTGGCTGCACTTATCATGCTACAAAAGTTCACGATA  2544
             |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct  296   GGGGTTTTGGGAATGTTGTGGCTGCACTTATCATGCTACAAAAGTTCACGGTA  244



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 313013073688


  Database: Dcitri_transcriptome.fasta
    Posted date:  Apr 30, 2019 10:57 AM
  Number of letters in database: 104,618,276
  Number of sequences in database:  60,261



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5