BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitr_OGSv2.0_rna.fa
           25,292 sequences; 49,157,538 total letters



Query= 1

Length=534
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcitrM026425.1.1Neuroligin-4, Y-linked (AHRD V3.11 *-* tr|A0A0M9A...  811     0.0  


>DcitrM026425.1.1 Neuroligin-4, Y-linked (AHRD V3.11 *-* tr|A0A0M9ACM0|A0A0M9ACM0_9HYME). 
AED 1.00| InterPro:IPR002018,Pfam:PF00135
Length=597

 Score = 811 bits (439),  Expect = 0.0
 Identities = 439/439 (100%), Gaps = 0/439 (0%)
 Strand=Plus/Plus

Query  1    ATGAACTACATCAACATCATCATCAAGCACATCTTCCTCCTGGTGATCATTTTCAACGCC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGAACTACATCAACATCATCATCAAGCACATCTTCCTCCTGGTGATCATTTTCAACGCC  60

Query  61   AAATCCTCCCTGGTGTTCGCGAGCCTCACATCTTCCCGCATCGTGCGCACCAAATATGGC  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   AAATCCTCCCTGGTGTTCGCGAGCCTCACATCTTCCCGCATCGTGCGCACCAAATATGGC  120

Query  121  GAGCTCTCCGGTCTCGTATCGACGCCGTCCGACCGCCTCGACGCGGTGGAAATCTTTCGC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121  GAGCTCTCCGGTCTCGTATCGACGCCGTCCGACCGCCTCGACGCGGTGGAAATCTTTCGC  180

Query  181  GGCGTCCCCTACGCTTTGCCGCCGGTCGGCCATCTGCGTTTCATGCCGCCCGTGAGCGGC  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  GGCGTCCCCTACGCTTTGCCGCCGGTCGGCCATCTGCGTTTCATGCCGCCCGTGAGCGGC  240

Query  241  GCGCTCTGGTCCGGCGTCAAAGTGGCGGACCGCTTCTCGCCCGTGTGTCCGCAGAACTTG  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  GCGCTCTGGTCCGGCGTCAAAGTGGCGGACCGCTTCTCGCCCGTGTGTCCGCAGAACTTG  300

Query  301  CCGAGTCCGGTGCGCATGCGTGCGAACAATACGAACGCGCACCCTCGTGGCCGTCTGGAG  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  CCGAGTCCGGTGCGCATGCGTGCGAACAATACGAACGCGCACCCTCGTGGCCGTCTGGAG  360

Query  361  TACTTGCATCGGCTCATCCCGTACCTGACCAACCAGAGCGAGGATTGTCTCTACCTCAAC  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  TACTTGCATCGGCTCATCCCGTACCTGACCAACCAGAGCGAGGATTGTCTCTACCTCAAC  420

Query  421  ATCTATGCGCCCGCTCAAG  439
            |||||||||||||||||||
Sbjct  421  ATCTATGCGCCCGCTCAAG  439



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 24699346142


  Database: Dcitr_OGSv2.0_rna.fa
    Posted date:  Mar 4, 2018 10:37 PM
  Number of letters in database: 49,157,538
  Number of sequences in database:  25,292



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5