BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitri_transcriptome.fasta
           60,261 sequences; 104,618,276 total letters



Query= Untitled_sequence

Length=1581
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcDTr03068.1Unknown protein                                           130     9e-29


>DcDTr03068.1 Unknown protein
Length=602

 Score = 130 bits (70),  Expect = 9e-29
 Identities = 70/70 (100%), Gaps = 0/70 (0%)
 Strand=Plus/Minus

Query  574  GAATGGTGTCAGTCCCAAGGCAAAGTCATGTGTGGGATCTACCCTGATGTTCAGTGCTAT  633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  70   GAATGGTGTCAGTCCCAAGGCAAAGTCATGTGTGGGATCTACCCTGATGTTCAGTGCTAT  11

Query  634  GATAATCGAA  643
            ||||||||||
Sbjct  10   GATAATCGAA  1


 Score = 111 bits (60),  Expect = 3e-23
 Identities = 60/60 (100%), Gaps = 0/60 (0%)
 Strand=Plus/Minus

Query  515  AGTTTAGATGTGATAACAAAGCAGATTGTGCGGACAAGTCAGATGAGCACAACTGTTATG  574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  546  AGTTTAGATGTGATAACAAAGCAGATTGTGCGGACAAGTCAGATGAGCACAACTGTTATG  487



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 160048369866


  Database: Dcitri_transcriptome.fasta
    Posted date:  Apr 30, 2019 10:57 AM
  Number of letters in database: 104,618,276
  Number of sequences in database:  60,261



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5