BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitr_OGSv2.0_rna.fa
           25,292 sequences; 49,157,538 total letters



Query= Untitled_sequence

Length=954
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcitrM078875.1.1Globin D, coelomic, putative (AHRD V3.11 *-* tr|E...  69.4    6e-11


>DcitrM078875.1.1 Globin D, coelomic, putative (AHRD V3.11 *-* tr|E0VN13|E0VN13_PEDHC). 
AED 0.33
Length=2312

 Score = 69.4 bits (37),  Expect = 6e-11
 Identities = 37/37 (100%), Gaps = 0/37 (0%)
 Strand=Plus/Minus

Query  791  GAAAGTCATTTCTCGATTGCCTAATTCAAGGAACATC  827
            |||||||||||||||||||||||||||||||||||||
Sbjct  348  GAAAGTCATTTCTCGATTGCCTAATTCAAGGAACATC  312



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 45079946102


  Database: Dcitr_OGSv2.0_rna.fa
    Posted date:  Mar 4, 2018 10:37 PM
  Number of letters in database: 49,157,538
  Number of sequences in database:  25,292



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5