BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Dcitr_OGSv2.0_rna.fa 25,292 sequences; 49,157,538 total letters Query= 216346 Length=1047 Score E Sequences producing significant alignments: (Bits) Value DcitrM056495.1.1CG8192-PA-like protein (AHRD V3.11 *-* tr|D3XL64|... 1906 0.0 >DcitrM056495.1.1 CG8192-PA-like protein (AHRD V3.11 *-* tr|D3XL64|D3XL64_APIME). Similar to MCOT17372.1.CT. AED 0.02 Length=1637 Score = 1906 bits (1032), Expect = 0.0 Identities = 1032/1032 (100%), Gaps = 0/1032 (0%) Strand=Plus/Plus Query 1 ATGGGGTATCTACCGTTGACCCTCGCTTGTCTTTGCGTCTGTATAGCCGTATGTCTAGGT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 270 ATGGGGTATCTACCGTTGACCCTCGCTTGTCTTTGCGTCTGTATAGCCGTATGTCTAGGT 329 Query 61 GACGATTACCGGGACAAGAGACAAACCCCGTTCTACTTCCACAACCAACAGCAACCCCGC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 330 GACGATTACCGGGACAAGAGACAAACCCCGTTCTACTTCCACAACCAACAGCAACCCCGC 389 Query 121 GGGCAAGTCCAGAGGCCGCCTGGCGCTCCTCCTCAATCGTCCACGCCCCAATTTCCGCGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 390 GGGCAAGTCCAGAGGCCGCCTGGCGCTCCTCCTCAATCGTCCACGCCCCAATTTCCGCGA 449 Query 181 TTCTCGGGCCCGCCCCCCCAGGGCTTCCGACCGTCCCCGGCCCTGGTCGACGAAAGCCGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450 TTCTCGGGCCCGCCCCCCCAGGGCTTCCGACCGTCCCCGGCCCTGGTCGACGAAAGCCGA 509 Query 241 GAAGAAGACGACGACGAAGACCAAAGCGAGGAAGTCGAGAGGAACGTTGTGCAATTCTCC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 510 GAAGAAGACGACGACGAAGACCAAAGCGAGGAAGTCGAGAGGAACGTTGTGCAATTCTCC 569 Query 301 CGGCCCGTTGCTTCCCCTACTCCGAGCGCGACGCCTCTTCCGTTCCGCCCCACTCCATCC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 570 CGGCCCGTTGCTTCCCCTACTCCGAGCGCGACGCCTCTTCCGTTCCGCCCCACTCCATCC 629 Query 361 GGTCCCGTAGCCCAGCAACAGCAAGTGGTTCTCAAGACGCGGCCCCTCGGCCCAGATTTC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 630 GGTCCCGTAGCCCAGCAACAGCAAGTGGTTCTCAAGACGCGGCCCCTCGGCCCAGATTTC 689 Query 421 GGCCCCACCCAGGGCCCCCAACGGAGAATTCCTCTCCAGGCCCAATCCAAACCAGGACGC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 690 GGCCCCACCCAGGGCCCCCAACGGAGAATTCCTCTCCAGGCCCAATCCAAACCAGGACGC 749 Query 481 TTTCCACAGCAAAATGAGCTGACGGCGGAAGAGGAGGCCGAACTGGCGGAAGAGCAGAAG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 750 TTTCCACAGCAAAATGAGCTGACGGCGGAAGAGGAGGCCGAACTGGCGGAAGAGCAGAAG 809 Query 541 GAAGAGGAGCCAGACCGTCTCACGGAGTTGTTGCCGCAGTCCAAATTTTCCTGCTCCGGC 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 810 GAAGAGGAGCCAGACCGTCTCACGGAGTTGTTGCCGCAGTCCAAATTTTCCTGCTCCGGC 869 Query 601 AAAAAAACCGGCTATTATGCAGATGACGGTCTGAACTGCGAAGTGTTCCACTATTGTCAG 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 870 AAAAAAACCGGCTATTATGCAGATGACGGTCTGAACTGCGAAGTGTTCCACTATTGTCAG 929 Query 661 GACAACGCGCGACACTCCTGGGTGTGCCCGGAGGGCTTCCTGTTCCATCAGGTTCATCTG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 930 GACAACGCGCGACACTCCTGGGTGTGCCCGGAGGGCTTCCTGTTCCATCAGGTTCATCTG 989 Query 721 ATCTGCATGCCTCCCTCATCGGAGAACATCTGCCAGCAGTCATCCCAGTTCCACTTTGTC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 990 ATCTGCATGCCTCCCTCATCGGAGAACATCTGCCAGCAGTCATCCCAGTTCCACTTTGTC 1049 Query 781 AATGATTTCCTCTACAAAGCCATTAACGAGGAAGAACATGAACGGAAACCCAATGTGTCC 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1050 AATGATTTCCTCTACAAAGCCATTAACGAGGAAGAACATGAACGGAAACCCAATGTGTCC 1109 Query 841 CTCCGATACGCGGACAGGTACTACCCAGAGAGCTACTACCACGAGGAGGACCAAATCGAA 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1110 CTCCGATACGCGGACAGGTACTACCCAGAGAGCTACTACCACGAGGAGGACCAAATCGAA 1169 Query 901 GAGGAGCCACAAGAGGTGCGCCGCCCGCCGCCCCAAGTTCAACCGCGCCCCGTCACCTTG 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1170 GAGGAGCCACAAGAGGTGCGCCGCCCGCCGCCCCAAGTTCAACCGCGCCCCGTCACCTTG 1229 Query 961 CGGCCCGGACCCCAACAGTTCCGCCAGTTTGCCGCCAGCAATCAAAACCAAGTGTTCCAC 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1230 CGGCCCGGACCCCAACAGTTCCGCCAGTTTGCCGCCAGCAATCAAAACCAAGTGTTCCAC 1289 Query 1021 TCGCCCGAGGAG 1032 |||||||||||| Sbjct 1290 TCGCCCGAGGAG 1301 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49592793236 Database: Dcitr_OGSv2.0_rna.fa Posted date: Mar 4, 2018 10:37 PM Number of letters in database: 49,157,538 Number of sequences in database: 25,292 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5