BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Diaci_v2.0.alt.fasta 1,751 sequences; 79,163,960 total letters Query= Untitled_sequence Length=1311 Score E Sequences producing significant alignments: (Bits) Value ScVcwli_1762 872 0.0 >ScVcwli_1762 Length=8177 Score = 872 bits (472), Expect = 0.0 Identities = 489/496 (99%), Gaps = 5/496 (1%) Strand=Plus/Plus Query 817 CAGGCGTGCGCGCACGACTTTTTCGACGAGTTGCGCAACCCGGCAACAACACTGCCCAAC 876 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3448 CAGGCGTGCGCGCACGACTTTTTCGACGAGTTGCGCAACCCGGCAACAACACTGCC-AAC 3506 Query 877 GGCAACCCCCTC-CCCCCTCTGTTCAACTTCACCGAACAAGAGTTGGCCATCCAGCCGAA 935 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3507 GGCAA-CCCCTCTCCCCCTCTGTTCAACTTCACCGAACAAGAGTTGGCCATCCAGCCGAA 3565 Query 936 TCTCAACGCGGCCCTCTTGCCCAAACGGCCCGGCTCCACAGAGGATGGGCCCAACCCTTC 995 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 3566 TCTCAACGCGGCCCTCTTGCCCAAACGGCCCGGCTCCACAGAGGATGGG-CCAACCCTTC 3624 Query 996 CTCCTCTAGTGCCCCGCCCCCCGCCGGCCCCACTACATCTACAGACCTCTCGGAAACCAC 1055 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3625 CTCCTCTAGTG-CCCGCCCCCCGCCGGCCCCACTACATCTACAGACCTCTCGGAAACCAC 3683 Query 1056 GTCCCTTCATCCTCCAGGAGCCAATGACATGGCTTAGACACGCCGCTCCCCTTATCGAGT 1115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3684 GTCCCTTCATCCTCCAGGAGCCAATGACATGGCTTAGACACGCCGCTCCCCTTATCGAGT 3743 Query 1116 CGAGTTACATCTTCCCCTACTCTATCAGGAGCCAATGAGATGGCTCAAAGCGTAATAGAC 1175 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3744 TGAGTTACATCTTCCCCTACTCTATCAGGAGCCAATGAGATGGCTCAAAGCGTAATAGAC 3803 Query 1176 ACGCCCCCTCCCCTTATCGAGTCGAGTTGCATCTTCCCCTCCCTCTACAAGGAGCCAATG 1235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3804 ACGCCCCCTCCCCTTATCGAGTCGAGTTGCATCTTCCCCTCCCTCTACAAGGAGCCAATG 3863 Query 1236 AGATGGCTCAAAGCGAAATAGACACACCCCTCCCATATTGATCAAGGTAGACGAGTTTTC 1295 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3864 AGATGGCTTAAAGCGAAATAGACACACCCCTCCCATATTGATCAAGGTAGACGAGTTTTC 3923 Query 1296 ATAAAATGCTCCCCCA 1311 |||||||||||||||| Sbjct 3924 ATAAAATGCTCCCCCA 3939 Score = 448 bits (242), Expect = 1e-124 Identities = 250/253 (99%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 345 AGGAATCTGTCACAGGGACATCAAGCCGCAGAACCTGCTCCTCAATCCGGAGACCGGGGT 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1969 AGGAATCTGTCACAGGGACATCAAGCCGCAGAACCTGCTCCTCAATCCGGAGACCGGGGT 2028 Query 405 TCTCAAGCTGTGCGACTTCGGCTCGGCCAAGCATCTGGTCCGGGGCGAGCCCAACGTGTC 464 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2029 TCTCAAGCTGTGCGACTTCGGCTCGG-CAAGCATCTGGTCCGGGGCGAGCCCAACGTGTC 2087 Query 465 CTACATCTGTTCTCGCTACTATCGCGCCCCCGAGCTCATCTTCGGTGCCATCGACTACAC 524 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2088 CTACATCT-TTCTCGCTACTATCGCG-CCCCGAGCTCATCTTCGGTGCCATCGACTACAC 2145 Query 525 GACCAAGATAGACGTGTGGAGTGCCGGCTGTGTGCTCGCCGAACTCCTGCTAGGACAGCC 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2146 GACCAAGATAGACGTGTGGAGTGCCGGCTGTGTGCTCGCCGAACTCCTGCTAGGACAGCC 2205 Query 585 CATGTTTCCAGGT 597 ||||||||||||| Sbjct 2206 CATGTTTCCAGGT 2218 Score = 381 bits (206), Expect = 1e-104 Identities = 227/236 (96%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 586 ATGT-TTCCAGGTGACTCAGGAGTGGACCAACTGGTCGAAATCATCAAAGTCCTCGGCAC 644 |||| || ||||||||||||| |||||||| || ||||||||||||||||||||||||| Sbjct 2915 ATGTATTGCAGGTGACTCAGGGGTGGACCAGCT--TCGAAATCATCAAAGTCCTCGGCAC 2972 Query 645 GCCGACCCGGGAGCAAATCCGCGAGATGAATCCCAACTACACCGAGTTCAAGTTTCCGCA 704 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2973 GCCGACCCGGGAGC-AATCCGCGAGATGAATCCCAACTACA-CGAGTTCAAGTTTCCGCA 3030 Query 705 GATCAAGTCTCACCCATGGTCCAAAGTGTTCCGGGTTCGAACTCCGCCCGACGCGATAGA 764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3031 GATCAAGTCTCACCCATGGTCCAAAGTGTTCCGGGTTCGAACTCCGCCCGACGCGATAGA 3090 Query 765 CCTGATTTCCCGCCTCCTCGAGTACACGCCGAGCTCCCGGATTTCCCCCCTCCAGG 820 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 3091 CCTGATTTCCCG-CTCCTCGAGTACACGCCGAGCTCCCGGATTTCCCCCCTCCAGG 3145 Score = 335 bits (181), Expect = 1e-90 Identities = 193/198 (97%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 1 GTGATCGGGAATGGCTCATTTGGTATCGTGTACCAGGCCAAGCTGTTGGACTCAGGGGAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 684 GTGATCGGGAATGGCTCATTTGGTATCGTGTACCAGGCCAAGCTGTTGGACTCAGGGGAA 743 Query 61 CTGGTAGCTATCAAGAAAGTTCTACAGGAC-AAGCGGTTCAAGAATCGCGAGATGCAAAT 119 ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 744 CTG---GCTATCAAGAAAGTTCTACAGGACAAAGCGGTTCAAGAATCGCGAGATGCAGAT 800 Query 120 TATGAGACGGCTCGAGCACTCGAACATTGTCAAGCTCAAGTACTTCTTCTATTCAAGTGG 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 801 TATGAGACGGCTCGAGCACTCGAACATTGTCAAGCTCAAGTACTTCTTCTATTCAAGTGG 860 Query 180 AGACAAGAAAGATGAGGT 197 |||||||||||||||||| Sbjct 861 AGACAAGAAAGATGAGGT 878 Score = 279 bits (151), Expect = 5e-74 Identities = 154/155 (99%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 194 AGG-TTTTCCTCAACCTTGTGTTAGAGTTTATGCCAGAGACTGTATACAAAGTGGCCAAA 252 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1373 AGGTTTTTCCTCAACCTTGTGTTAGAGTTTATGCCAGAGACTGTATACAAAGTGGCCAAA 1432 Query 253 CACTACAGCAAATCCAAGCAAAACTTCCCTTGCTTCTATACTAAGCTGTATATCTACCAG 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1433 CACTACAGCAAATCCAAGCAAAACTTCCCTTGCTTCTATACTAAGCTGTATATCTACCAG 1492 Query 313 TTGTTCCGTAGCTTAGCCTACATACATGTTCTAGG 347 ||||||||||||||||||||||||||||||||||| Sbjct 1493 TTGTTCCGTAGCTTAGCCTACATACATGTTCTAGG 1527 Score = 121 bits (65), Expect = 3e-26 Identities = 89/100 (89%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 1171 TAGACACGCCCCCTCCCCTTATCGAGTCGAGTTGCATCTTCCCCTCCCTCTACAAGGAGC 1230 |||||||| || ||||||||||||||| ||||| ||||||||||| ||||| |||||| Sbjct 3718 TAGACACG-CCGCTCCCCTTATCGAGTTGAGTTACATCTTCCCCT-ACTCTATCAGGAGC 3775 Query 1231 CAATGAGATGGCTCAAAGCGAAATAGACACACCCC-TCCC 1269 |||||||||||||||||||| ||||||||| |||| |||| Sbjct 3776 CAATGAGATGGCTCAAAGCGTAATAGACACGCCCCCTCCC 3815 Score = 121 bits (65), Expect = 3e-26 Identities = 89/100 (89%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 1090 TAGACACG-CCGCTCCCCTTATCGAGTCGAGTTACATCTTCCCCTAC-TCTATCAGGAGC 1147 |||||||| || ||||||||||||||||||||| ||||||||||| | |||| |||||| Sbjct 3799 TAGACACGCCCCCTCCCCTTATCGAGTCGAGTTGCATCTTCCCCTCCCTCTACAAGGAGC 3858 Query 1148 CAATGAGATGGCTCAAAGCGTAATAGACACGCCCCCTCCC 1187 ||||||||||||| |||||| ||||||||| |||| |||| Sbjct 3859 CAATGAGATGGCTTAAAGCGAAATAGACACACCCC-TCCC 3897 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 101667187690 Database: Diaci_v2.0.alt.fasta Posted date: May 28, 2019 3:05 PM Number of letters in database: 79,163,960 Number of sequences in database: 1,751 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5