BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitr_OGSv2.0_cds.fa
           25,292 sequences; 34,155,564 total letters



Query= 1

Length=2133
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcitrC005270.1.1Neuroligin (AHRD V3.11 *-* tr|B0WXM8|B0WXM8_CULQU...  1026    0.0  
DcitrC100025.1.1Neuroligin (AHRD V3.11 *** tr|W5JRC0|W5JRC0_ANODA...  117     3e-25


>DcitrC005270.1.1 Neuroligin (AHRD V3.11 *-* tr|B0WXM8|B0WXM8_CULQU). Similar to 
MCOT11687.0.MT XP_017301470.1. AED 0.00
Length=576

 Score = 1026 bits (555),  Expect = 0.0
 Identities = 569/576 (99%), Gaps = 0/576 (0%)
 Strand=Plus/Plus

Query  1558  CAGGAGGATGGGTTTGCCGCCTATTCTACCGCACTCAGCGTCACCGTGGCCATTGGTTGT  1617
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1     CAGGAGGATGGGTTTGCCGCCTATTCTACCGCACTCAGCGTCACCGTGGCCATTGGTTGT  60

Query  1618  TCCCTGTTGATTCTGAACGTCCTGATATTCGCCGGCGTGTATTATCAGCGGGATAAATCC  1677
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61    TCCCTGTTGATTCTGAACGTCCTGATATTCGCCGGCGTGTATTATCAGCGGGATAAATCC  120

Query  1678  CGTCAGGGCGGCTCAGGTCACCAGGACTCGGCGGGCAGTATACATAGCAACACGAGCTCT  1737
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121   CGTCAGGGCGGCTCAGGTCACCAGGACTCGGCGGGCAGTATACATAGCAACACGAGCTCT  180

Query  1738  AATGGGAGTCAGAACGGGGCGGGTATGATCAAGCAGCGCCGCCAGGAGAACGGTGGACCT  1797
             | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  181   ACTGGGAGTCAGAACGGGGCGGGTATGATCAAGCAGCGCCGCCAGGAGAACGGGGGACCT  240

Query  1798  ATGTCTAATATTAGTGCAGACTACCTCTATGTTTCAGGCGCCCCGGAGCTGCTTCAGATC  1857
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241   ATGTCTAATATTAGTGCAGACTACCTCTATGTTTCAGGCGCCCCGGAGCTGCTTCAGATC  300

Query  1858  GTCGAAACCTCCCGCTCCTCCCCCCGCAGCGGGGGCGGCACGGGGCCCTCCATTCTCAAA  1917
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301   GTCGAAACCTCCCGCTCCTCCCCCCGCAGCGGGGGCGGCACGGGGCCCTCCATTCTCAAA  360

Query  1918  AAGCCGCCCCTCGAAAACAGTTCCATCCTGGTCCTTCAACCGCCGCACCGGTATCCTCCC  1977
             ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct  361   AAGCCGCCCCTCGAAAACAGTTCCATCCTGGTCCTTTTACCGCCGCACCGGTATCCTCCC  420

Query  1978  ATCGAGTTCCAGGACGTCAAGATATCCTGCAGTGCGACTTTGCCGCGCGCGCCGCCCCCT  2037
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  421   ATCGAGTTCCAGGACGTGAAGATATCCTGCAGTGCGACTTTGCCGCGCGCGCCGCCCCCT  480

Query  2038  CCCCGTTTGCCCGAGTCACAACCGCTCCTGTCGGGGGGCGGCACACTGGGCCGGTACAAA  2097
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481   CCCCGTTTGCCCGAGTCACAACCGCTCCTGTCGGGGGGCGGCACACTGGGCCGGTACAAA  540

Query  2098  CCGCAGCACAAGACCATTGACGAGCTGAAAGTGTGA  2133
             |||||||||||||||||||||||  |||||||||||
Sbjct  541   CCGCAGCACAAGACCATTGACGAATTGAAAGTGTGA  576


>DcitrC100025.1.1 Neuroligin (AHRD V3.11 *** tr|W5JRC0|W5JRC0_ANODA). Similar to 
MCOT21339.0.CT. AED 0.20| InterPro:IPR002018,Pfam:PF00135
Length=2427

 Score = 117 bits (63),  Expect = 3e-25
 Identities = 181/238 (76%), Gaps = 7/238 (3%)
 Strand=Plus/Plus

Query  16   AACTACGGGCTGATGGACCAAATAGCGGCCCTCCATTGGATCCAGGAGAACATAGGGTAC  75
            |||||||||||||||||||||||||||||| |||||||| | ||| |||| || |     
Sbjct  82   AACTACGGGCTGATGGACCAAATAGCGGCCTTCCATTGGGTGCAGCAGAATATCGCCCTG  141

Query  76   TTCAATGGGGACCCGTCCAATGTGACCCTGGTGGGGCATGGAACAGGCGCGGCCTGCGTC  135
            ||    || ||||||   ||||||||| || |||| || || || || ||||||||| | 
Sbjct  142  TTTGGCGGCGACCCGGGAAATGTGACCATGATGGGACACGGTACGGGGGCGGCCTGCATT  201

Query  136  AACTTCCTCATGATTTCGCCCGCCGTGCCTGATGGGCTCCTGTTTCACCGCGCCATCCTC  195
            ||||||||||||||||||||| |||||  ||   || || |||| |||   ||| |||| 
Sbjct  202  AACTTCCTCATGATTTCGCCCACCGTGA-TGCCTGG-TC-TGTTCCACAAGGCCGTCCTA  258

Query  196  ATGTCAGGCTCGGCGCTC-AGTCCGTGGGCCTTGGTTCGA-GACCCGGCCCGCTACGC  251
             |||| ||||| || |||   ||| |||||| |||| ||| || |||| || || |||
Sbjct  259  TTGTCCGGCTCTGCCCTCTCATCC-TGGGCCCTGGT-CGAGGATCCGGTCCACTTCGC  314


 Score = 93.5 bits (50),  Expect = 5e-18
 Identities = 116/149 (78%), Gaps = 0/149 (0%)
 Strand=Plus/Plus

Query  943   CATGGAGAGGAACTGCCCTATCTGTTCGGGGCACCCTTGGTGGGAGGGGTCAACCATTTC  1002
             ||||| |||||  |||||||  | ||||| || ||| || | |  ||| ||| |||||||
Sbjct  1057  CATGGTGAGGAGTTGCCCTACATATTCGGTGCCCCCCTGATCGATGGGTTCAGCCATTTC  1116

Query  1003  CCCCGCAACTTCACCAAGTCTGAAATCCTCCTGAGTGAAGCCACCATGATCTATTTCAGC  1062
             ||||| |||||||||||||||||  |   |||||||||||||  |||  ||||  | |||
Sbjct  1117  CCCCGGAACTTCACCAAGTCTGAGGTTGCCCTGAGTGAAGCCTTCATACTCTACCTGAGC  1176

Query  1063  AACTTCGCCAGAACTGGGAACCCTAACGA  1091
             ||||| ||  |||| |||||||| |||||
Sbjct  1177  AACTTTGCGCGAACAGGGAACCCGAACGA  1205



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 70580227004


  Database: Dcitr_OGSv2.0_cds.fa
    Posted date:  Mar 4, 2018 10:37 PM
  Number of letters in database: 34,155,564
  Number of sequences in database:  25,292



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5