BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitri_transcriptome.fasta
           60,261 sequences; 104,618,276 total letters



Query= DC06G037760.1

Length=1131
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcDTr03062.1Unknown protein                                           278     2e-73


>DcDTr03062.1 Unknown protein
Length=651

 Score = 278 bits (150),  Expect = 2e-73
 Identities = 150/150 (100%), Gaps = 0/150 (0%)
 Strand=Plus/Plus

Query  982   CTTACTGAATTTCTGGATCGCGTTTGCTCACACAAACTCCATTTCACCGTGTTCGAGTTT  1041
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  102   CTTACTGAATTTCTGGATCGCGTTTGCTCACACAAACTCCATTTCACCGTGTTCGAGTTT  161

Query  1042  TTCGACATTGACTACTCGGTGTTAAGAAATCTGTTGGGAGCTGTTCTGTCATTTGGAATC  1101
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  162   TTCGACATTGACTACTCGGTGTTAAGAAATCTGTTGGGAGCTGTTCTGTCATTTGGAATC  221

Query  1102  ATCGTCATTCAGCTGAGCGTTACGTCTTGA  1131
             ||||||||||||||||||||||||||||||
Sbjct  222   ATCGTCATTCAGCTGAGCGTTACGTCTTGA  251



Lambda      K        H
    1.34    0.622     1.13 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 113871896450


  Database: Dcitri_transcriptome.fasta
    Posted date:  Apr 30, 2019 10:57 AM
  Number of letters in database: 104,618,276
  Number of sequences in database:  60,261



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5