BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Diaci_v3.0.ref.fa 14 sequences; 476,518,215 total letters Query= 124 Length=1368 Score E Sequences producing significant alignments: (Bits) Value DC3.0sc07 931 0.0 >DC3.0sc07 Length=30552171 Score = 931 bits (504), Expect = 0.0 Identities = 527/538 (98%), Gaps = 1/538 (0%) Strand=Plus/Plus Query 811 TCA-GTGAGCATCCACCTCCTGTCCCCTCTGACGCGCCACCTGTTCAAGCGCGGCATCAT 869 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1696856 TCAGGTGAGCATCCACCTCCTCTCCCCTCTGACGCGCCACCTGTTCAAGCGCGGCATCAT 1696915 Query 870 GCAGTCAGGCACTCTCAACGCGCCCTGGTCTTACATGACGGCCGAGCGCGCCGTCGAAAT 929 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1696916 GCAGTCAGGCACTCTCAACGCGCCCTGGTCTTACATGACGGCCGAGCGCGCCGTCGAAAT 1696975 Query 930 CGCGCGCAAACTCCTGGACGACGTTGGTTGTAACGGCACGACCAACCTAGAGGACAACCC 989 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1696976 CGCGCGCAAACTCCTGGACGACGTTGGTTGTAACGGCACGACCAACCTAGAGGACAACCC 1697035 Query 990 AGAGCGTGTTATGTCATGTCTGGGCGCGGTCGACTCTAAGACCATCTCCAGCATGCAGTG 1049 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1697036 AGAGCGTGTTATGTCATGTCTGGGCGCGGTCGACTCTAAGACCATCTCCAGCATGCAGTG 1697095 Query 1050 GAACTCCTATACAGCGATATTGGGGTTCACGTCGGCGCCTACCATTGATGGAGAACTGGT 1109 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1697096 GAACTCCTATACAGCGATATTGGGGTTCACGTCCGCGCCTACTATTGATGGAGAACTGGT 1697155 Query 1110 ACCCAAACATCCTCTGGCCATGATAGAGGATATGAGCAAGGATGATAATCTCACGGAGAT 1169 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1697156 ACCCAAACATCCTCTGGCCATGATTGAGGATATGAGCAAGGATGATAATCTCACGGAGAT 1697215 Query 1170 CATCATCGGGAGTAATCAGGACGAAGGTAAGGGATCCAGATTGCCTATTAACAAATTGTT 1229 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 1697216 CATCATCGGGAGTAATCAGGACGAAGGTAAGGGATCCAAATTGCCTATTAACAGATTGTT 1697275 Query 1230 TATTATTATTTACATACCTATCAGATTGATTATGACTGTAGAGGGGATAAGAGATGCTGA 1289 |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 1697276 TATTATTATTTACATACCTATCAGATTGATTATGTTTGTAGAGGGTATAAGAGATGCTGA 1697335 Query 1290 AGTTGATTGCCATCGACTGGAATACATTCAAAGTATGTACATACTGGTACCATATGTA 1347 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1697336 AGTTGATTGGCATCGACTGGAATACATTCAAAGTATGTACATACTGGTACCATATGTA 1697393 Score = 496 bits (268), Expect = 3e-138 Identities = 276/280 (99%), Gaps = 0/280 (0%) Strand=Plus/Plus Query 1 ATGAACCCCGCTCTGATCCTGTCCCTCCTGTTCTTATACCCGGTTCACATCCAGTGTAGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1691579 ATGAACCCCGCTCTGATCCTGTCCCTCCTGTTCTTATACCCGGTTCACATCCAGTGTAGG 1691638 Query 61 CCGCGTGCACACCAGCACCATTCACACGATCACCACTCGCACGCCGGTCCACACGGCGAG 120 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1691639 CCGCGTGCACACCAGCACCATTCACACGATCATCACTCGCACGCCGGTCCACACGGCGAG 1691698 Query 121 AATCACAGCTACGAGCGGCACAGTTACGAACACAGGGACCCGCTGCTGATTGAGACAAAG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1691699 AATCACAGCTACGAGCGGCACAGTTACGAACACAGGGACCCGCTGCTGATTGAGACAAAG 1691758 Query 181 AGCGGTCCAGTGAGGGGCTACTCCAAGGAGGTCCTGGGGAGGGAGGTCCATATATTCACC 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1691759 AGCGGTCCAGTGAGGGGCTACTCCAAGGAGGTCCTGGGGAGGGAGGTGCATATATTCACC 1691818 Query 241 GGGATACCGTTCGCTAAGCCGCCCCTGGGGAATTTGAGGT 280 |||||||| ||||||||||| ||||||||||||||||||| Sbjct 1691819 GGGATACCATTCGCTAAGCCACCCCTGGGGAATTTGAGGT 1691858 Score = 390 bits (211), Expect = 1e-106 Identities = 225/232 (97%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 277 AGGTTTAAGAAACCAGTGCCCATAGGTAGATGGCCAGGGTTCATAGATGCCACCAAGTTA 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1692371 AGGTTTAAGAAACCAGTGCCCATAGGTAGATGGCCAGGGTTCATAGATGCCACCAAGTTA 1692430 Query 337 CCAAACAGTTGCTATCAGGAGAAGTACGAGTATTTCCCCGGGTTTGAGGGCGAGGAGATG 396 ||||||||||| ||||||||||||||||||||||| || || |||||||||||||||||| Sbjct 1692431 CCAAACAGTTGTTATCAGGAGAAGTACGAGTATTTTCCTGGATTTGAGGGCGAGGAGATG 1692490 Query 397 TGGAATCCCAATACGAACTTGAGCGAAGACTGTCTGTATCTGAATATTTGGGCGCCTCAA 456 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 1692491 TGGAATCCCAATACGAATTTGAGCGAAGACTGTCTGTATCTGAACATTTGGGCGCCTCAA 1692550 Query 457 CGATTGAGAATTCGACACAAGACCGGCGAACACGATACAAAGCGACAACTGG 508 |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1692551 CGATTGAGAATTCGACACAAGACCGGCGAACACGATACGAAGCGACAACTGG 1692602 Score = 291 bits (157), Expect = 2e-76 Identities = 157/157 (100%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 507 GGCGCCTGTTCTAGTTTGGATCTACGGGGGAGGCTACATGTCAGGCACGGCAACACTGGA 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1694834 GGCGCCTGTTCTAGTTTGGATCTACGGGGGAGGCTACATGTCAGGCACGGCAACACTGGA 1694893 Query 567 TATTTACAATGCTGATATTGTAGCAGGCACCAGTGACGTCATTGTTGTATCTATTCAATA 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1694894 TATTTACAATGCTGATATTGTAGCAGGCACCAGTGACGTCATTGTTGTATCTATTCAATA 1694953 Query 627 CAGGGTGGGAGCATTCGGATTTCTCTATCTGAAAGGT 663 ||||||||||||||||||||||||||||||||||||| Sbjct 1694954 CAGGGTGGGAGCATTCGGATTTCTCTATCTGAAAGGT 1694990 Score = 278 bits (150), Expect = 1e-72 Identities = 154/156 (99%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 660 AGGTTTACTCCCGGATCATTTTGAGGACGCTCCGGGCAACATGGGTCTATGGGATCAAAT 719 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1696361 AGGTCTACTCCCGGATCATTTTGAGGACGCTCCGGGCAACATGGGTCTATGGGATCAAAT 1696420 Query 720 CATGGCGTTCGAATGGTTGAGAGACAACATCGAATTTTTTGGTGGCAATCCGGATCTGAT 779 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1696421 CATGGCGTTCGAATGGTTGAGAGACAACATCGAATTTTTTGGTGGCAATCCTGATCTGAT 1696480 Query 780 CACCCTGTTTGGAGAATCTGCAGGGGCTGCTTCAGT 815 |||||||||||||||||||||||||||||||||||| Sbjct 1696481 CACCCTGTTTGGAGAATCTGCAGGGGCTGCTTCAGT 1696516 Score = 122 bits (66), Expect = 6e-26 Identities = 66/66 (100%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 598 AGTGACGTCATTGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1694998 AGTGACGTCATTGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 1695057 Query 658 AAAGGT 663 |||||| Sbjct 1695058 AAAGGT 1695063 Score = 122 bits (66), Expect = 6e-26 Identities = 66/66 (100%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 598 AGTGACGTCATTGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1695506 AGTGACGTCATTGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 1695565 Query 658 AAAGGT 663 |||||| Sbjct 1695566 AAAGGT 1695571 Score = 117 bits (63), Expect = 3e-24 Identities = 65/66 (98%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 598 AGTGACGTCATTGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 657 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1695071 AGTGACGTCATTGTTGTATCCATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 1695130 Query 658 AAAGGT 663 |||||| Sbjct 1695131 AAAGGT 1695136 Score = 111 bits (60), Expect = 1e-22 Identities = 64/66 (97%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 598 AGTGACGTCATTGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 657 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1695217 AGTGACGTGATAGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 1695276 Query 658 AAAGGT 663 |||||| Sbjct 1695277 AAAGGT 1695282 Score = 111 bits (60), Expect = 1e-22 Identities = 64/66 (97%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 598 AGTGACGTCATTGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 657 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1695360 AGTGACGTGATAGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 1695419 Query 658 AAAGGT 663 |||||| Sbjct 1695420 AAAGGT 1695425 Score = 106 bits (57), Expect = 6e-21 Identities = 63/66 (95%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 598 AGTGACGTCATTGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 657 |||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1695144 AGTGACGTTATAGTTGTATCCATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 1695203 Query 658 AAAGGT 663 |||||| Sbjct 1695204 AAAGGT 1695209 Score = 106 bits (57), Expect = 6e-21 Identities = 63/66 (95%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 598 AGTGACGTCATTGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 657 |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1695433 AGTGACGTGATAGTTGTCTCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 1695492 Query 658 AAAGGT 663 |||||| Sbjct 1695493 AAAGGT 1695498 Score = 91.6 bits (49), Expect = 2e-16 Identities = 61/66 (92%), Gaps = 3/66 (5%) Strand=Plus/Plus Query 598 AGTGACGTCATTGTTGTATCTATTCAATACAGGGTGGGAGCATTCGGATTTCTCTATCTG 657 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1695290 AGTGACGTGATAGTTGTATCTATTCAATACAGGGT---AGCATTCGGATTTCTCTATCTG 1695346 Query 658 AAAGGT 663 |||||| Sbjct 1695347 AAAGGT 1695352 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 638533882820 Database: Diaci_v3.0.ref.fa Posted date: May 28, 2019 1:32 PM Number of letters in database: 476,518,215 Number of sequences in database: 14 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5