BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitri_transcriptome.fasta
           60,261 sequences; 104,618,276 total letters



Query= Dcitr11g07200.1.1

Length=782
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcDTi11429.1Candidate secreted effector Minc12921                     1395    0.0  


>DcDTi11429.1 Candidate secreted effector Minc12921
Length=1769

 Score = 1395 bits (755),  Expect = 0.0
 Identities = 755/755 (100%), Gaps = 0/755 (0%)
 Strand=Plus/Plus

Query  19    GACATCGGATTTTCTTGTTAAGCAAGCAGGTAATTTCATACCGAATTCAAACAATTTGAA  78
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  333   GACATCGGATTTTCTTGTTAAGCAAGCAGGTAATTTCATACCGAATTCAAACAATTTGAA  392

Query  79    GCGAAATAAAGGACACACTTCTCTTTTGAAGTAGGTAGGTCTGTATTTTAAAGTGAACTT  138
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  393   GCGAAATAAAGGACACACTTCTCTTTTGAAGTAGGTAGGTCTGTATTTTAAAGTGAACTT  452

Query  139   GAAGTATTTTCAAATGAAATAATTCAAACAATTTGAAGATTTTGAAGTAAAAATAAAGAC  198
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  453   GAAGTATTTTCAAATGAAATAATTCAAACAATTTGAAGATTTTGAAGTAAAAATAAAGAC  512

Query  199   AACATTATTCTCAAATTATATAATACTCGTATTTTGATGAAACCTTGTGTGTAAGATTAC  258
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  513   AACATTATTCTCAAATTATATAATACTCGTATTTTGATGAAACCTTGTGTGTAAGATTAC  572

Query  259   TACGATGTGTTTAATGATGAACATTGGATGTTTCGTGTTATTTCTCAGCAGTGTTTCATC  318
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  573   TACGATGTGTTTAATGATGAACATTGGATGTTTCGTGTTATTTCTCAGCAGTGTTTCATC  632

Query  319   GAAACAGCCCAACTATGCAAGAGGGTTTGGTGATCACCTCAAGTGGCAATTACTGGATCA  378
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  633   GAAACAGCCCAACTATGCAAGAGGGTTTGGTGATCACCTCAAGTGGCAATTACTGGATCA  692

Query  379   GGGTCTCACAGCGGCTAAGGAGTCACGGAAACCCATCATGGCGGTATTCCACAAGTCCTG  438
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  693   GGGTCTCACAGCGGCTAAGGAGTCACGGAAACCCATCATGGCGGTATTCCACAAGTCCTG  752

Query  439   GTGTGGCGCCTGTCGATCTCTCGGCCCCAAGGTGGCTAATTCGGATAAGATCGCCGAGCT  498
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  753   GTGTGGCGCCTGTCGATCTCTCGGCCCCAAGGTGGCTAATTCGGATAAGATCGCCGAGCT  812

Query  499   GAGTAAGCACTTTGAATTGATCAACGTATACGATGATGAAGAACCAGACGATAACAAGTA  558
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  813   GAGTAAGCACTTTGAATTGATCAACGTATACGATGATGAAGAACCAGACGATAACAAGTA  872

Query  559   CTTCCCCGATGGCAGCTACATACCCCGCATCCTGTTCCTTGACGCGGACGGTGAGGTGGA  618
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  873   CTTCCCCGATGGCAGCTACATACCCCGCATCCTGTTCCTTGACGCGGACGGTGAGGTGGA  932

Query  619   TCGGAAAATTTACAATCAGAAGGGGAGCAAGGAGCATAAGTACTTCTATTATAACGCCCA  678
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  933   TCGGAAAATTTACAATCAGAAGGGGAGCAAGGAGCATAAGTACTTCTATTATAACGCCCA  992

Query  679   GAGTATTGTCGACTCTATGCAACACGCGATGCAGCACTACCAGGCGGACAAGGAGTTGTG  738
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  993   GAGTATTGTCGACTCTATGCAACACGCGATGCAGCACTACCAGGCGGACAAGGAGTTGTG  1052

Query  739   AGGGGGAAATTTCTTCCCTTCTTTCTTTAAGGAAG  773
             |||||||||||||||||||||||||||||||||||
Sbjct  1053  AGGGGGAAATTTCTTCCCTTCTTTCTTTAAGGAAG  1087



Lambda      K        H
    1.34    0.623     1.13 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 77906926440


  Database: Dcitri_transcriptome.fasta
    Posted date:  Apr 30, 2019 10:57 AM
  Number of letters in database: 104,618,276
  Number of sequences in database:  60,261



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5