BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Diaci_v3.0.ref.unplaced.fa 23,672 sequences; 201,546,927 total letters Query= Untitled_sequence Length=3063 Score E Sequences producing significant alignments: (Bits) Value Scaffold_18018_18759 963 0.0 Scaffold_18017_18758 955 0.0 >Scaffold_18018_18759 Length=23331 Score = 963 bits (521), Expect = 0.0 Identities = 530/534 (99%), Gaps = 1/534 (0%) Strand=Plus/Plus Query 2530 TTCACGATATTACAAGAAGTTTCCCAACTGTTGCCAGACAACGAGCGAATTCAAATGCTC 2589 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5991 TTCA-GATATTACAAGAAGTTTCCCAACTGTTGCCAGACAACGAGCGAATTCAAATGCTC 6049 Query 2590 GAAGTGATTCATAAAATCAACAAGGAACAGAGACGTGGAAGACGGCGTCAACCATTTGGT 2649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6050 GAAGTGATTCATAAAATCAACAAGGAACAGAGACGTGGAAGACGGCGTCAACCATTTGGT 6109 Query 2650 AACAGTGCCACGAAAAGTGCCATCCAGGTCCTCATCATGGAGAATAGCAAGAGGGAAAAC 2709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6110 AACAGTGCCACGAAAAGTGCCATCCAGGTCCTCATCATGGAGAATAGCAAGAGGGAAAAC 6169 Query 2710 TGCAAATACGAAACTTATAGACCTTTGATGGACATGGGGCAACTGAATGATAAAGACGAA 2769 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 6170 TGCAAATACGAAACTTATAGACCTTTGATGGACATGGCGCAACTGAATGATAAAGACGAA 6229 Query 2770 CGTCATTTGGAAAAGCCAGATCTTATTAGAAACAAAAGTACAAAGAGGACCAAAGATTCT 2829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6230 CGTCATTTGGAAAAGCCAGATCTTATTAGAAACAAAAGTACAAAGAGGACCAAAGATTCT 6289 Query 2830 CTTCTAGGAACCTGTAGGGTAGCGCGCAATCGACAACAGAATGCGTCCGGTGTGGTATAC 2889 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct 6290 CTTCTAGGAACCTGTAGGATAGTGCGCAATCGACAACAGAATGCGTCCGGTGTGGTATAC 6349 Query 2890 AATCCGGCTTTCTATGATGCCCCGATAACCTACTTGAATCAGGATGCAACTAACCCTAGC 2949 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6350 AATCCGGCTTTCTATGATGCCCCGATAACCTACTTGAATCAGGATGCAACTAACCCTAGC 6409 Query 2950 TATCAACCTTACTTACAGCTGAATGCTGATAGACAGCTGGAACTGGTGGAGCTTACGCCA 3009 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6410 TATCAACCTTACTTACAGCTGAATGCTGATAGACAGCTGGAACTGGTGGAGCTTACGCCA 6469 Query 3010 TCCTCTATAGATTATCACACCAAGAAACGAAACGACACATTGACAAAGTTTTGA 3063 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6470 TCCTCTATAGATTATCACACCAAGAAACGAAACGACACATTGACAAAGTTTTGA 6523 Score = 529 bits (286), Expect = 3e-148 Identities = 290/292 (99%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 1698 GGGTTGGTACGATAAAGAAATCAACAAAATCTTCATGAACAAAGATGACAAGGATAGCAT 1757 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1049 GGGTTGGTACGATAAAGAAATCAACAAAATCTTCATGAACAAAGATGACAAGGATAGCAT 1108 Query 1758 CACTCAGGATATTGTCTATCTTCTCAACGTCCTGTCTGAACAAGCCAAGCAAAGTTACAC 1817 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1109 CACTCAGGATATTGTCTATCTTCTCAACGTCCTGTCTGAACAAGCCAAGCAAAGTTACAC 1168 Query 1818 GCTCCGGAAACAGACTATGACGAAGGATAAGAAAACCGTGCGTTTGAAATCATTTGACCT 1877 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1169 GCTCCGGAAACAGACTATGACGAAGGATAAGAAAACCGTGCGTTTGAAATCATTTGACCT 1228 Query 1878 GTCATTCGCTACACTGCTCGATGACGTGAAGGCAGATTTGAAAAAGGTCCACTTTGATTT 1937 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1229 GTCGTTCGCTACACTGCTCGATGACGTGAAGGCAGACTTGAAAAAGGTCCACTTTGATTT 1288 Query 1938 TACGAATGACCAGATTTTGGTGTACTATATTTTAAAATGGCTTTATCGAGGT 1989 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1289 TACGAATGACCAGATTTTGGTGTACTATATTTTAAAATGGCTTTATCGAGGT 1340 Score = 436 bits (236), Expect = 2e-120 Identities = 236/236 (100%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 2196 AGGCTGGGAGTGGGCAGGAACGATGTTGAATATTGTGGGAGAGACGAGTGACGGCCTGGA 2255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4134 AGGCTGGGAGTGGGCAGGAACGATGTTGAATATTGTGGGAGAGACGAGTGACGGCCTGGA 4193 Query 2256 CCTCATTTTCACCCCCTGCCCTCACCAGGCGTTGCGTCACCGGATGCGTATGTCACCGGA 2315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4194 CCTCATTTTCACCCCCTGCCCTCACCAGGCGTTGCGTCACCGGATGCGTATGTCACCGGA 4253 Query 2316 CTCAGGCGGAGGCTTCATGACGCGTAGCTTAGGCCGGACGCAACCGCAAAGGAAGAGCGA 2375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4254 CTCAGGCGGAGGCTTCATGACGCGTAGCTTAGGCCGGACGCAACCGCAAAGGAAGAGCGA 4313 Query 2376 CATGCATGCACTGACAACCTTCACCTTGCCACGATTGAGTCGAAACTTGGAATCAA 2431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4314 CATGCATGCACTGACAACCTTCACCTTGCCACGATTGAGTCGAAACTTGGAATCAA 4369 Score = 394 bits (213), Expect = 1e-107 Identities = 213/213 (100%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 1986 AGGTTCTGAGCGTGATGGGAAATTTCTGGAGCCCGTACTGAAACCTTATCTAATCAAGTT 2045 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1991 AGGTTCTGAGCGTGATGGGAAATTTCTGGAGCCCGTACTGAAACCTTATCTAATCAAGTT 2050 Query 2046 ATACATCGCTAGTCATGAGTGCAACTGGTTTTTGGAAGAATGGAAAGCCAGGATGAACAA 2105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2051 ATACATCGCTAGTCATGAGTGCAACTGGTTTTTGGAAGAATGGAAAGCCAGGATGAACAA 2110 Query 2106 GGACGAAATGTATGCCTTGAGGAAGTACTGTCATCTGGTTGTCAAAGAACAAGTGAACAC 2165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2111 GGACGAAATGTATGCCTTGAGGAAGTACTGTCATCTGGTTGTCAAAGAACAAGTGAACAC 2170 Query 2166 TTCGGATGGACTATTGGACTGTGTGAATAAAGG 2198 ||||||||||||||||||||||||||||||||| Sbjct 2171 TTCGGATGGACTATTGGACTGTGTGAATAAAGG 2203 Score = 193 bits (104), Expect = 4e-47 Identities = 104/104 (100%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 2432 ATTTCAGTCCTATGACGCTTCTAGTGGATTTTTCTCGCCGCTATGGGTCCCACAGGGGTT 2491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5353 ATTTCAGTCCTATGACGCTTCTAGTGGATTTTTCTCGCCGCTATGGGTCCCACAGGGGTT 5412 Query 2492 TTGGGAATGTTGTGGCCGCACTTATCATGCTACAAAAGTTCACG 2535 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 5413 TTGGGAATGTTGTGGCCGCACTTATCATGCTACAAAAGTTCACG 5456 >Scaffold_18017_18758 Length=11141 Score = 955 bits (517), Expect = 0.0 Identities = 529/534 (99%), Gaps = 3/534 (1%) Strand=Plus/Plus Query 2530 TTCACGATATTACAAGAAGTTTCCCAACTGTTGCCAGACAACGAGCGAATTCAAATGCTC 2589 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6003 TTCA-GATATTACAAGAAGTTTCCCAACTGTTGCCAGACAACGAGCGAATTCAAATGCTC 6061 Query 2590 GAAGTGATTCATAAAATCAACAAGGAACAGAGACGTGGAAGACGGCGTCAACCATTTGGT 2649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6062 GAAGTGATTCATAAAATCAACAAGGAACAGAGACGTGGAAGACGGCGTCAACCATTTGGT 6121 Query 2650 AACAGTGCCACGAAAAGTGCCATCCAGGTCCTCATCATGGAGAATAGCAAGAGGGAAAAC 2709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6122 AACAGTGCCACGAAAAGTGCCATCCAGGTCCTCATCATGGAGAATAGCAAGAGGGAAAAC 6181 Query 2710 TGCAAATACGAAACTTATAGACCTTTGATGGACATGGGGCAACTGAATGATAAAGACGAA 2769 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 6182 TGCAAATACGAAACTTATAGACCTTTGATGGACATGGCGCAACTGAATGATAAAGACGAA 6241 Query 2770 CGTCATTTGGAAAAGCCAGATCTTATTAGAAACAAAAGTACAAAGAGGACCAAAGATTCT 2829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6242 CGTCATTTGGAAAAGCCAGATCTTATTAGAAACAAAAGTACAAAGAGGACCAAAGATTCT 6301 Query 2830 CTTCTAGGAACCTGTAGGGTAGCGCGCAATCGACAACAGAATGCGTCCGGTGTGGTATAC 2889 |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 6302 CTTCTAGGAACCTGTAGG--AGTGCGCAATCGACAACAGAATGCGTCCGGTGTGGTATAC 6359 Query 2890 AATCCGGCTTTCTATGATGCCCCGATAACCTACTTGAATCAGGATGCAACTAACCCTAGC 2949 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6360 AATCCGGCTTTCTATGATGCCCCGATAACCTACTTGAATCAGGATGCAACTAACCCTAGC 6419 Query 2950 TATCAACCTTACTTACAGCTGAATGCTGATAGACAGCTGGAACTGGTGGAGCTTACGCCA 3009 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6420 TATCAACCTTACTTACAGCTGAATGCTGATAGACAGCTGGAACTGGTGGAGCTTACGCCA 6479 Query 3010 TCCTCTATAGATTATCACACCAAGAAACGAAACGACACATTGACAAAGTTTTGA 3063 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6480 TCCTCTATAGATTATCACACCAAGAAACGAAACGACACATTGACAAAGTTTTGA 6533 Score = 516 bits (279), Expect = 2e-144 Identities = 288/292 (99%), Gaps = 1/292 (0%) Strand=Plus/Plus Query 1698 GGGTTGGTACGATAAAGAAATCAACAAAATCTTCATGAACAAAGATGACAAGGATAGCAT 1757 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1073 GGGTTGGTACGATAAAGAAATCAACAAAATCTTCATGAACAAAGATGACAAGGATAGCAT 1132 Query 1758 CACTCAGGATATTGTCTATCTTCTCAACGTCCTGTCTGAACAAGCCAAGCAAAGTTACAC 1817 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1133 CACTCAGGATATTGTCTATCTTCTCAACGTCCTGTCTGAACAAGCCAAGCAAAGTTACAC 1192 Query 1818 GCTCCGGAAACAGACTATGACGAAGGATAAGAAAACCGTGCGTTTGAAATCATTTGACCT 1877 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1193 GCTCCGGAAACAGACTATGACGAAGGATAAGAAAACCGTGCGTTTGAAATCATTTGACCT 1252 Query 1878 GTCATTCGCTACACTGCTCGATGACGTGAAGGCAGATTTGAAAAAGGTCCACTTTGATTT 1937 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1253 GTCGTTCGCTACACTGCTCGATGACGTGAAGGCAGACTTGAAAAAGGTCCACTTTGATTT 1312 Query 1938 TACGAATGACCAGATTTTGGTGTACTATATTTTAAAATGGCTTTATCGAGGT 1989 |||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 1313 TACGAATGACCAGA-TTTGGTGTATTATATTTTAAAATGGCTTTATCGAGGT 1363 Score = 431 bits (233), Expect = 8e-119 Identities = 235/236 (99%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 2196 AGGCTGGGAGTGGGCAGGAACGATGTTGAATATTGTGGGAGAGACGAGTGACGGCCTGGA 2255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4145 AGGCTGGGAGTGGGCAGGAACGATGTTGAATATTGTGGGAGAGACGAGTGACGGCCTGGA 4204 Query 2256 CCTCATTTTCACCCCCTGCCCTCACCAGGCGTTGCGTCACCGGATGCGTATGTCACCGGA 2315 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 4205 CCTCATTTTCACCCCGTGCCCTCACCAGGCGTTGCGTCACCGGATGCGTATGTCACCGGA 4264 Query 2316 CTCAGGCGGAGGCTTCATGACGCGTAGCTTAGGCCGGACGCAACCGCAAAGGAAGAGCGA 2375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4265 CTCAGGCGGAGGCTTCATGACGCGTAGCTTAGGCCGGACGCAACCGCAAAGGAAGAGCGA 4324 Query 2376 CATGCATGCACTGACAACCTTCACCTTGCCACGATTGAGTCGAAACTTGGAATCAA 2431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4325 CATGCATGCACTGACAACCTTCACCTTGCCACGATTGAGTCGAAACTTGGAATCAA 4380 Score = 388 bits (210), Expect = 5e-106 Identities = 212/213 (99%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 1986 AGGTTCTGAGCGTGATGGGAAATTTCTGGAGCCCGTACTGAAACCTTATCTAATCAAGTT 2045 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2013 AGGTTCTGAGCGTGATGGGAAATTTCTGGAGCCCGTACTGAAACCTTATCTAATCAAGTT 2072 Query 2046 ATACATCGCTAGTCATGAGTGCAACTGGTTTTTGGAAGAATGGAAAGCCAGGATGAACAA 2105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2073 ATACATCGCTAGTCATGAGTGCAACTGGTTTTTGGAAGAATGGAAAGCCAGGATGAACAA 2132 Query 2106 GGACGAAATGTATGCCTTGAGGAAGTACTGTCATCTGGTTGTCAAAGAACAAGTGAACAC 2165 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2133 GGACGAAATGTATGCCTTGAGGAAATACTGTCATCTGGTTGTCAAAGAACAAGTGAACAC 2192 Query 2166 TTCGGATGGACTATTGGACTGTGTGAATAAAGG 2198 ||||||||||||||||||||||||||||||||| Sbjct 2193 TTCGGATGGACTATTGGACTGTGTGAATAAAGG 2225 Score = 193 bits (104), Expect = 4e-47 Identities = 104/104 (100%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 2432 ATTTCAGTCCTATGACGCTTCTAGTGGATTTTTCTCGCCGCTATGGGTCCCACAGGGGTT 2491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5366 ATTTCAGTCCTATGACGCTTCTAGTGGATTTTTCTCGCCGCTATGGGTCCCACAGGGGTT 5425 Query 2492 TTGGGAATGTTGTGGCCGCACTTATCATGCTACAAAAGTTCACG 2535 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 5426 TTGGGAATGTTGTGGCCGCACTTATCATGCTACAAAAGTTCACG 5469 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 609683276885 Database: Diaci_v3.0.ref.unplaced.fa Posted date: Jun 21, 2019 11:44 AM Number of letters in database: 201,546,927 Number of sequences in database: 23,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5