BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Dcitri_transcriptome.fasta 60,261 sequences; 104,618,276 total letters Query= 65465 Length=2877 Score E Sequences producing significant alignments: (Bits) Value DcDTr21301.1Unknown protein 1397 0.0 >DcDTr21301.1 Unknown protein Length=7295 Score = 1397 bits (756), Expect = 0.0 Identities = 756/756 (100%), Gaps = 0/756 (0%) Strand=Plus/Minus Query 2111 AAATTGCCTCACAGTATCACCCCGACAAAAATCCAGGCGGACGCGACATTTTCGTTCGAG 2170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2914 AAATTGCCTCACAGTATCACCCCGACAAAAATCCAGGCGGACGCGACATTTTCGTTCGAG 2855 Query 2171 CTAACAAAGCGTACGACTTCCTATGCAGTCGTACATGTTGGCAGAACAATGATCCCAATC 2230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2854 CTAACAAAGCGTACGACTTCCTATGCAGTCGTACATGTTGGCAGAACAATGATCCCAATC 2795 Query 2231 CCAATAATATCGTACTGGTGCTAAGAACCCAGAGTATACTGTTCCATAGATATTCAGAAG 2290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2794 CCAATAATATCGTACTGGTGCTAAGAACCCAGAGTATACTGTTCCATAGATATTCAGAAG 2735 Query 2291 AGCTATCCGGCTACAAGTATGCCGGCTATCGGCAACTCATCACAACTATCCGGGCGGAAA 2350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2734 AGCTATCCGGCTACAAGTATGCCGGCTATCGGCAACTCATCACAACTATCCGGGCGGAAA 2675 Query 2351 CTTCGGACGAAAACGAAGCGCTATTTGGCGGCTCTACGGAACACGATTCACTTCTGCAAG 2410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2674 CTTCGGACGAAAACGAAGCGCTATTTGGCGGCTCTACGGAACACGATTCACTTCTGCAAG 2615 Query 2411 CGGCTGTGGAACTGGCGTACCACACGGTCCAGTGTTCGGCGCTCAATGCACAGGAGTTGA 2470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2614 CGGCTGTGGAACTGGCGTACCACACGGTCCAGTGTTCGGCGCTCAATGCACAGGAGTTGA 2555 Query 2471 ATAACGAGGGCGGATTCCAGACGCTGCATGTAGCCTTTACCCGTTGTATGTCGGTTCTGA 2530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2554 ATAACGAGGGCGGATTCCAGACGCTGCATGTAGCCTTTACCCGTTGTATGTCGGTTCTGA 2495 Query 2531 GTAACTCTCTCAAGGGAAACGAAATGCCTGTCCTAGTATGTTCCTATGTAGTCAAATGTT 2590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2494 GTAACTCTCTCAAGGGAAACGAAATGCCTGTCCTAGTATGTTCCTATGTAGTCAAATGTT 2435 Query 2591 ACACGGTAGCGGCCCAGTTCACCGGCTGTCGCTCCACATTCACCGCCATGTGCCCGTCGC 2650 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2434 ACACGGTAGCGGCCCAGTTCACCGGCTGTCGCTCCACATTCACCGCCATGTGCCCGTCGC 2375 Query 2651 TCCTGCGCGACCTGGCCGCCATTCTCCGCTTCCCCCGACTCGCCCGGCTAGCCGCCGACA 2710 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2374 TCCTGCGCGACCTGGCCGCCATTCTCCGCTTCCCCCGACTCGCCCGGCTAGCCGCCGACA 2315 Query 2711 CCGCCCAGTGTCTCGGATCGCTCGCGATCGACGGGTCGCTACGGGACGCTATGCTGGACA 2770 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2314 CCGCCCAGTGTCTCGGATCGCTCGCGATCGACGGGTCGCTACGGGACGCTATGCTGGACA 2255 Query 2771 CGAGCGTGGTGTGGTCGCTACTCACGTTCATGTTCTCGTATGACTACACGCTGGAGGAGT 2830 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2254 CGAGCGTGGTGTGGTCGCTACTCACGTTCATGTTCTCGTATGACTACACGCTGGAGGAGT 2195 Query 2831 GTGAGGTGGAGAGAGACCCGGATCAGAACCAACAGG 2866 |||||||||||||||||||||||||||||||||||| Sbjct 2194 GTGAGGTGGAGAGAGACCCGGATCAGAACCAACAGG 2159 Score = 1386 bits (750), Expect = 0.0 Identities = 750/750 (100%), Gaps = 0/750 (0%) Strand=Plus/Minus Query 228 AGGTGCGGGCCTCATCATGCGGGCCCTCATCGAAGAGGGGGAACCCGAAACAGCGCGCCG 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5166 AGGTGCGGGCCTCATCATGCGGGCCCTCATCGAAGAGGGGGAACCCGAAACAGCGCGCCG 5107 Query 288 CCTGCAACATCTCGCCCTGTGTGAAGCCGCTCTGCCCCGGCATCTACTGGCCGCTCTATT 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5106 CCTGCAACATCTCGCCCTGTGTGAAGCCGCTCTGCCCCGGCATCTACTGGCCGCTCTATT 5047 Query 348 CTCCGGTAGCGACCGGAGCGACACCATGCATCGGCAACTCAGTCGACATCTCATCGGTCT 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5046 CTCCGGTAGCGACCGGAGCGACACCATGCATCGGCAACTCAGTCGACATCTCATCGGTCT 4987 Query 408 ATGGGTAACAGACAACGAAGCGGCCCATGCCCTCCTATCTCGTATCTTACCTCTGGGGTT 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4986 ATGGGTAACAGACAACGAAGCGGCCCATGCCCTCCTATCTCGTATCTTACCTCTGGGGTT 4927 Query 468 GCTGCAGTTCCTGGAATCAGATGAAGAGGTACCACCCGATGCTGTCGAAGAAGATGTAGA 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4926 GCTGCAGTTCCTGGAATCAGATGAAGAGGTACCACCCGATGCTGTCGAAGAAGATGTAGA 4867 Query 528 ACTGAGGGATAACCTCAAACTGGCTGTGGATCATGCGACTAGAAACCAGAGAAATCCACA 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4866 ACTGAGGGATAACCTCAAACTGGCTGTGGATCATGCGACTAGAAACCAGAGAAATCCACA 4807 Query 588 TTTGGTCAAAATCGAGCGGCACATCAAAACGCTCGAAAAGAGTCTCGAGTCGGCGCTCCA 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4806 TTTGGTCAAAATCGAGCGGCACATCAAAACGCTCGAAAAGAGTCTCGAGTCGGCGCTCCA 4747 Query 648 GCATTGGTCCGTCTCGCTCGGGCTGGACCAATCAGTGCGCCCGGGGGGCGGAGCTTCCAC 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4746 GCATTGGTCCGTCTCGCTCGGGCTGGACCAATCAGTGCGCCCGGGGGGCGGAGCTTCCAC 4687 Query 708 GGGTCCCACCAATCACAAAGACCGGCCCATCGTTCTACGAAAAAGGCGGGAACGGGTCAA 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4686 GGGTCCCACCAATCACAAAGACCGGCCCATCGTTCTACGAAAAAGGCGGGAACGGGTCAA 4627 Query 768 AGCCTCCGCCAATTGGAAGCTCTTTTACTACAAGTTCGCCGGGAACCATTCGTTGCCCAG 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4626 AGCCTCCGCCAATTGGAAGCTCTTTTACTACAAGTTCGCCGGGAACCATTCGTTGCCCAG 4567 Query 828 TCTGATTTGGAATCATAAGACGAGGGAGGAGCTAAGGGAGGCGCTGGAGAAGGAGCTGAG 887 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4566 TCTGATTTGGAATCATAAGACGAGGGAGGAGCTAAGGGAGGCGCTGGAGAAGGAGCTGAG 4507 Query 888 GGCGTTTTATGCGGATCGGGACAATATGGGCGCGGCCGTCATTTCGTGGAACCATCATGA 947 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4506 GGCGTTTTATGCGGATCGGGACAATATGGGCGCGGCCGTCATTTCGTGGAACCATCATGA 4447 Query 948 GTTTGAGGTGGTCTATTCGAGCTTACAGGA 977 |||||||||||||||||||||||||||||| Sbjct 4446 GTTTGAGGTGGTCTATTCGAGCTTACAGGA 4417 Score = 798 bits (432), Expect = 0.0 Identities = 432/432 (100%), Gaps = 0/432 (0%) Strand=Plus/Minus Query 973 CAGGACGGCATTTTCGCGGAAAACAAGGAAAAACTCATTCTCTCCGCCATCCAATCTCTG 1032 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5741 CAGGACGGCATTTTCGCGGAAAACAAGGAAAAACTCATTCTCTCCGCCATCCAATCTCTG 5682 Query 1033 CTGCAGAAAGAGGGCGACCAGAGCGAATCCAGCCTGTCCCCGGCAGAACTGGAGGCGCAG 1092 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5681 CTGCAGAAAGAGGGCGACCAGAGCGAATCCAGCCTGTCCCCGGCAGAACTGGAGGCGCAG 5622 Query 1093 TTCCACACCATGCGTCGATTGGTCGCTTGTCGCGTTGGTTACGCGGCGTTTACGTCGATG 1152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5621 TTCCACACCATGCGTCGATTGGTCGCTTGTCGCGTTGGTTACGCGGCGTTTACGTCGATG 5562 Query 1153 CCCAGCTTTCGCGACGCGGTGGGATTGAAGGTAGTGAAAGCTCTGAATCGCGAGAACGAA 1212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5561 CCCAGCTTTCGCGACGCGGTGGGATTGAAGGTAGTGAAAGCTCTGAATCGCGAGAACGAA 5502 Query 1213 GCCATCTCGCACGCCAGCGTGGACATGCTATGCGCGCTCATGCATCCCATGCATGACGAG 1272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5501 GCCATCTCGCACGCCAGCGTGGACATGCTATGCGCGCTCATGCATCCCATGCATGACGAG 5442 Query 1273 AGTTCCGACCTGCGTCAGGAGCAGCTGAACAAGTCATGCCTCCTGTCCAATCACAAGTTT 1332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5441 AGTTCCGACCTGCGTCAGGAGCAGCTGAACAAGTCATGCCTCCTGTCCAATCACAAGTTT 5382 Query 1333 CTGGACGCGTTGCTTAACATGTGGATCCGGCATGTTACCCTGGGCACTGGAGCCCTGGTA 1392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5381 CTGGACGCGTTGCTTAACATGTGGATCCGGCATGTTACCCTGGGCACTGGAGCCCTGGTA 5322 Query 1393 GTGTCGGCAATG 1404 |||||||||||| Sbjct 5321 GTGTCGGCAATG 5310 Score = 789 bits (427), Expect = 0.0 Identities = 427/427 (100%), Gaps = 0/427 (0%) Strand=Plus/Minus Query 1685 AGGTCACTCGCTGTTATCCAACCAGAGACGAGGACGGGGCGGTCATCTGGCCCCTGCCCA 1744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3730 AGGTCACTCGCTGTTATCCAACCAGAGACGAGGACGGGGCGGTCATCTGGCCCCTGCCCA 3671 Query 1745 AAGTCAAACGGTGTCTCTCCCATAGTACAGTGTTGCCGCACATCGTACAGACGCTGCTCA 1804 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3670 AAGTCAAACGGTGTCTCTCCCATAGTACAGTGTTGCCGCACATCGTACAGACGCTGCTCA 3611 Query 1805 CGTTTGATCCGGCCCTGGTGGAACAGGTGGCAACACTGCTTTGTGAAATCGTCGTTGATA 1864 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3610 CGTTTGATCCGGCCCTGGTGGAACAGGTGGCAACACTGCTTTGTGAAATCGTCGTTGATA 3551 Query 1865 ATGCGCTGGCCAGGAAACTATATTTGACTGGCGTATTCTTCTTCATTCTCATGTATACCG 1924 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3550 ATGCGCTGGCCAGGAAACTATATTTGACTGGCGTATTCTTCTTCATTCTCATGTATACCG 3491 Query 1925 GGTCCAACGTGTTGCCCATCGCGCGGTTTCTCAAACTCACTCACACTCAGCAAGCGTTCA 1984 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3490 GGTCCAACGTGTTGCCCATCGCGCGGTTTCTCAAACTCACTCACACTCAGCAAGCGTTCA 3431 Query 1985 TTTCGGATGAGTTGACCAGTTCTGATTTACTGAAGCGGTCCATATTGGGCCCGCTCCTGC 2044 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3430 TTTCGGATGAGTTGACCAGTTCTGATTTACTGAAGCGGTCCATATTGGGCCCGCTCCTGC 3371 Query 2045 CCGAGGCCATGCTGTATTATTTGGAGAACCACGGGCCGGAGAAGTTTGCGCAGATATTTC 2104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3370 CCGAGGCCATGCTGTATTATTTGGAGAACCACGGGCCGGAGAAGTTTGCGCAGATATTTC 3311 Query 2105 TAGGTGA 2111 ||||||| Sbjct 3310 TAGGTGA 3304 Score = 388 bits (210), Expect = 2e-106 Identities = 210/210 (100%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 16 AAAGTGGAAGGTTTCAAGCATCACTGGTCTGAATCTCGCAACCCAGTCATTCTTGTGGTT 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6596 AAAGTGGAAGGTTTCAAGCATCACTGGTCTGAATCTCGCAACCCAGTCATTCTTGTGGTT 6537 Query 76 ACCTCTCATTCTCTCGACCAGATGTCATCAGTACCTGGCTCCCAGTCCGAGGTCCTGGGT 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6536 ACCTCTCATTCTCTCGACCAGATGTCATCAGTACCTGGCTCCCAGTCCGAGGTCCTGGGT 6477 Query 136 TCGTACCCGTTCAACACAATCGAAGCTATGCACACCGTATCGGACCTGCAGGGCGGATTT 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6476 TCGTACCCGTTCAACACAATCGAAGCTATGCACACCGTATCGGACCTGCAGGGCGGATTT 6417 Query 196 GTGATTGTGTGTAAACCGTTTGGGAGAATG 225 |||||||||||||||||||||||||||||| Sbjct 6416 GTGATTGTGTGTAAACCGTTTGGGAGAATG 6387 Score = 335 bits (181), Expect = 3e-90 Identities = 181/181 (100%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 1398 GGCAATGAGCATCGTGTACAACCAGTACTCGGACACCATCGGCCTGTTTCCTGACATCCG 1457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4266 GGCAATGAGCATCGTGTACAACCAGTACTCGGACACCATCGGCCTGTTTCCTGACATCCG 4207 Query 1458 CTGTGTCATTCTAATGTTAGCCCGAACCCAAGATAAGCTAGAGAGAGACAGACTGGTCAT 1517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4206 CTGTGTCATTCTAATGTTAGCCCGAACCCAAGATAAGCTAGAGAGAGACAGACTGGTCAT 4147 Query 1518 TTTTCTCGACAAACTACTCGACTTTAAGGAAAATGTGAAGATATTCCTCGATGAAAATGG 1577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4146 TTTTCTCGACAAACTACTCGACTTTAAGGAAAATGTGAAGATATTCCTCGATGAAAATGG 4087 Query 1578 T 1578 | Sbjct 4086 T 4086 Score = 172 bits (93), Expect = 3e-41 Identities = 99/102 (97%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1586 CTCAGGATCTGGGCATCCGATCTCCCCTGACCTTCTTCAATAATCTCTACCATAGGTTTC 1645 ||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| Sbjct 4366 CTCAGGATCTGGGTATCCGATCTCCCCTCACTTTCTTCAATAATCTCTACCATAGGTTTC 4307 Query 1646 TCCTTACACAGCGGATTGATATGAAATGTCAATGTCTTCAGG 1687 |||||||||||||||||||||||||||||||||||||||||| Sbjct 4306 TCCTTACACAGCGGATTGATATGAAATGTCAATGTCTTCAGG 4265 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 293250327832 Database: Dcitri_transcriptome.fasta Posted date: Apr 30, 2019 10:57 AM Number of letters in database: 104,618,276 Number of sequences in database: 60,261 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5