BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Dcitr_OGSv2.0_rna.fa 25,292 sequences; 49,157,538 total letters Query= Untitled_sequence Length=720 Score E Sequences producing significant alignments: (Bits) Value DcitrM023480.1.1Unknown protein. Similar to XP_008474732.1. AED 0.15 734 0.0 >DcitrM023480.1.1 Unknown protein. Similar to XP_008474732.1. AED 0.15 Length=1281 Score = 734 bits (397), Expect = 0.0 Identities = 403/406 (99%), Gaps = 0/406 (0%) Strand=Plus/Plus Query 4 CAGAGCCAGACCCCTGCACCTGCTGTAAACGGGACCACACCTGCTGTAAACGGGACCACA 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 628 CAGAGCCAGACCCCTGCACCTGCTGTAAACGGGACCACACCTGCTGTAAACGGGACCACA 687 Query 64 CCTGCGGTAAATGGGACGACACCTGCTGCAAACGGGACAACACCCGCGGGAAATGGAATC 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 688 CCTGCGGTAAATGGGACGACACCTGCTGCAAACGGGACAACACCCGCGGGAAATGGAATC 747 Query 124 ACATCTAGTGAGAAACCAAAGGGTAAATTCGAGTACACCAACCTGACCAAGGCTGCTATC 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 748 ACATCTAGTGAGAAACCAAAGGGTAAATTCGAGTACACCAACCTGACCAAGGCTGCTATC 807 Query 184 TGTATTCCAAATAACAACGAGTCTATCAGCTACTGTGAGACTAAATTGAAGGCTCAAGTG 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 808 TGTATTCCAAATAACAACGAGTCTATCAGCTACTGTGAGACTAAATTGAAGGCTCAAGTG 867 Query 244 GAGACCCACTTCCATCCTGAACTCAAGCTGGCCAATCTTACCGAAGGAAAATGTGTCTAT 303 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 868 GAGACCCACTTCCATCCTGAACTCAAGCTGGCCAATCTTACCGAAGGGAAATGTGTCTAT 927 Query 304 TTATCTGATGGACCCGAAGTAACTGGCTCAACTCCAGCAGGTAACGGAACCACCCCAGCC 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 928 TTATCTGATGGACCCGAAGTAACTGGCTCAACTCCAGCAGGTAACGGAACCACCCCACCC 987 Query 364 GGCAACGGAACCACCCCACCCGGCAACGGAACTACCCCAGCCGGTA 409 |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 988 GGCAACGGAACCACCCCAGCCGGCAACGGAACTACCCCAGCCGGTA 1033 Score = 560 bits (303), Expect = 6e-159 Identities = 317/324 (98%), Gaps = 0/324 (0%) Strand=Plus/Plus Query 397 ACCCCAGCCGGTAACGGAACCACCCCACCCGGCAACGGAACTACCCCAGCCGGAAACGGA 456 || ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 958 ACTCCAGCAGGTAACGGAACCACCCCACCCGGCAACGGAACCACCCCAGCCGGCAACGGA 1017 Query 457 ACTACCCCAGCCGGTACCACTCCAGCAGGCACCACCCCGGCAGGCAACGGTACCACCACA 516 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 1018 ACTACCCCAGCCGGTACCACTCCAGCAGGCACCAGCCCGGCAGGCAACGGTACCACCCCA 1077 Query 517 GCCCCTGGAGGGGCTCCTACAGGACCACTCCGTTGTACCATAACCGGACTCTACACCACC 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 GCCCCTGGAGGGGCTCCTACAGGACCACTCCGTTGTACCATAACCGGACTCTACACCACC 1137 Query 577 CCGAGGGGAGTTCAAGAGAGAGTGCGTCTCAACTTCTTCAACAATGTCAATGACCCAAAA 636 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1138 CCGGGGGGAGTTCAAGAGAGAGTGCGTCTCAACTTCTTCAACAATGTCAATGACCCAAAA 1197 Query 637 GGCAAGGACAATGTGATCATGGTGATGGGTTACTATGGTAACGCCAGTCAGTCCAACAAC 696 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1198 GGCAAGGACAATGTGATCATGGTGATGGGTTACTATGGTAACGCCAGTCAGTCCAACAAC 1257 Query 697 CTGGTTGAGACACCTTTGAAATAG 720 |||||||||||||||||||||||| Sbjct 1258 CTGGTTGAGACACCTTTGAAATAG 1281 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33725040410 Database: Dcitr_OGSv2.0_rna.fa Posted date: Mar 4, 2018 10:37 PM Number of letters in database: 49,157,538 Number of sequences in database: 25,292 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5