BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Csinensis_154_v1.1.transcript_primaryTranscriptOnly_annot.fasta
           25,379 sequences; 35,429,586 total letters



Query= Untitled_sequence

Length=188
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

orange1.1g044500mterpene synthase 02, similar to AT4G16730.1          348     8e-96
orange1.1g041457mterpene synthase 10, similar to AT2G24210.1          206     5e-53
orange1.1g044890mterpene synthase-like sequence-1,8-cineole, simi...  111     1e-24


>orange1.1g044500m terpene synthase 02, similar to AT4G16730.1
Length=261

 Score = 348 bits (188),  Expect = 8e-96
 Identities = 188/188 (100%), Gaps = 0/188 (0%)
 Strand=Plus/Plus

Query  1    AGGTGGGATACTGGGGCCATGGTGAAACTACCATGTTATATGCAGATTTGCTATTTGGCT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  73   AGGTGGGATACTGGGGCCATGGTGAAACTACCATGTTATATGCAGATTTGCTATTTGGCT  132

Query  61   ATGTTCAACTTTGGAAATGACTTGGCATATTATGATCTCAAAATTCATGGCCTGAATTTG  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  133  ATGTTCAACTTTGGAAATGACTTGGCATATTATGATCTCAAAATTCATGGCCTGAATTTG  192

Query  121  CTGTCCAACATTAAGAATGAGGTCGCTAATAATGTGCTAGGATATTTTGAATTTTTCCTT  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  193  CTGTCCAACATTAAGAATGAGGTCGCTAATAATGTGCTAGGATATTTTGAATTTTTCCTT  252

Query  181  TTTCTTTA  188
            ||||||||
Sbjct  253  TTTCTTTA  260


>orange1.1g041457m terpene synthase 10, similar to AT2G24210.1
Length=696

 Score = 206 bits (111),  Expect = 5e-53
 Identities = 131/141 (93%), Gaps = 0/141 (0%)
 Strand=Plus/Plus

Query  1    AGGTGGGATACTGGGGCCATGGTGAAACTACCATGTTATATGCAGATTTGCTATTTGGCT  60
            |||||| ||| ||||||||||| |||||| |||| |||||||||||||||||||||||||
Sbjct  217  AGGTGGAATATTGGGGCCATGGAGAAACTGCCATATTATATGCAGATTTGCTATTTGGCT  276

Query  61   ATGTTCAACTTTGGAAATGACTTGGCATATTATGATCTCAAAATTCATGGCCTGAATTTG  120
            |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct  277  ATGTTCAACTTTGGAAATGACTTGGCATATGATGTTCTCAAAAATCATGGCCTGAATTTG  336

Query  121  CTGTCCAACATTAAGAATGAG  141
            |||||  ||||||||||||||
Sbjct  337  CTGTCTTACATTAAGAATGAG  357


>orange1.1g044890m terpene synthase-like sequence-1,8-cineole, similar to AT3G25830.1
Length=1674

 Score = 111 bits (60),  Expect = 1e-24
 Identities = 90/105 (86%), Gaps = 0/105 (0%)
 Strand=Plus/Plus

Query  37    TATATGCAGATTTGCTATTTGGCTATGTTCAACTTTGGAAATGACTTGGCATATTATGAT  96
             ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||| ||| |
Sbjct  1003  TATATGCAGATTTGCTACTTGGCCATGTTTAACTTTGGAAATGAGTTGGCATATGATGTT  1062

Query  97    CTCAAAATTCATGGCCTGAATTTGCTGTCCAACATTAAGAATGAG  141
              | |||||||||||||| |||   || ||| |||||||||| |||
Sbjct  1063  ATGAAAATTCATGGCCTCAATACTCTATCCTACATTAAGAAAGAG  1107



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 5749568385


  Database: Csinensis_154_v1.1.transcript_primaryTranscriptOnly_annot.fasta
    Posted date:  Jul 16, 2015 10:56 AM
  Number of letters in database: 35,429,586
  Number of sequences in database:  25,379



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5