BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: SS_all_quivered_hq.fasta 42,166 sequences; 76,657,983 total letters Query= XM_008486359.3 Length=906 Score E Sequences producing significant alignments: (Bits) Value c87853/f11p11/1705isoform=c87853;full_length_coverage=11;non_full... 1565 0.0 c55628/f2p1/1653isoform=c55628;full_length_coverage=2;non_full_le... 1507 0.0 c4652/f2p1/322isoform=c4652;full_length_coverage=2;non_full_lengt... 351 7e-96 >c87853/f11p11/1705 isoform=c87853;full_length_coverage=11;non_full_length_coverage=11;isoform_length=1705 Length=1705 Score = 1565 bits (847), Expect = 0.0 Identities = 851/853 (99%), Gaps = 0/853 (0%) Strand=Plus/Plus Query 54 ACGAGTGGTAACTCTACACACCACACCCACACCACTGGTAACTCCACACACCACACCCAC 113 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 742 ACCAGTGGTAACTCTACACACCACACCCACACCACTGGTAACTCCACACACCACACCCAC 801 Query 114 ACGTCTGATATCACCACCATGACGCGAATCCAAGATGGCGACCATCAGACAGACGTCCTC 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 802 ACGTCTGATATCACCACCATGACGCGAATCCAAGATGGCGACCATCAGACAGACGTCCTC 861 Query 174 CAAGTCCCAAGCTCACGAATCAAGGCACTGACATTGAAACACATCGAGGCACTCGGAGTA 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 862 CAAGTCCCAAGCTCACGAATCAAGGCACTGACATTGAAACACATCGAGGCACTCGGAGTA 921 Query 234 CCGGTGAAAACTTTTGTCCTGTCCAGGAATCGAACTCCGCCCCCCAGTCCCCTACCCGCT 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 922 CCGGTGAAAACTTTTGTCCTGTCCAGGAATCGAACTCCGCCCCCCAGTCCCCTACCCGCT 981 Query 294 AGTAATATCAACATTATCAACACGGCTGTTAAGGATAGCAACAATAATAGTAATGTGCTG 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 982 AGTAATATCAACATTATCAACACGGCTGTTAAGGATAGCAACAATAATAGTAATGTGCTG 1041 Query 354 GAGATCAACACGACGCTGGCAGTGTCTAACACGAGTACTATTGTTAGTCATAGCGGCAGT 413 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1042 GAGATCAACACGACGCAGGCAGTGTCTAACACGAGTACTATTGTTAGTCATAGCGGCAGT 1101 Query 414 AGTAATAGTCATGTGAGTAACGGTACACAGTTGTCGCCTCACTACACCAATATGGATACC 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1102 AGTAATAGTCATGTGAGTAACGGTACACAGTTGTCGCCTCACTACACCAATATGGATACC 1161 Query 474 CTCAACAATAACACCAACACACCAAATACCCAACCCACGGGCTTACCTATGACCCCGAAC 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1162 CTCAACAATAACACCAACACACCAAATACCCAACCCACGGGCTTACCTATGACCCCGAAC 1221 Query 534 ACACCTAGTAACCCAGTAAGCTTTGTTCATGCGACTAGTACACCTATATCCATACCCAAT 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1222 ACACCTAGTAACCCAGTAAGCTTTGTTCATGCGACTAGTACACCTATATCCATACCCAAT 1281 Query 594 GCTGTTCTGGCATCTAGCTTACTAACTCCGGCGACATCTCCTTCCTGCAGTCCTGCTAGT 653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1282 GCTGTTCTGGCATCTAGCTTACTAACTCCGGCGACATCTCCTTCCTGCAGTCCTGCTAGT 1341 Query 654 TCCTATCATTCCTTGTAGTTATCCCAAGTCTCCTTATCTCTTGCTTACTACACTAGACAT 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1342 TCCTATCATTCCTTGTAGTTATCCCAAGTCTCCTTATCTCTTGCTTACTACACTAGACAT 1401 Query 714 CCTTTTGTAGCTCTTGATATCTGGTTCTTTAGCTTCTTGTGTCCTAAGCTATGCTAGAAT 773 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1402 CCTTTTGTAGCTCTTGATATCTGGTTCTTTAGCTTCTTGTGTCCTAAGCTATGCTAGAAT 1461 Query 774 TTCAACTTAAACATGTTTTGTTGCGGCTTCACATTAACTGTTTTTCACATAATCCATTAA 833 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1462 TTCAACTTAAACATGTTTTGTTGCGGCTTCACATTAACTGTTTTTCACATAATCCATTAA 1521 Query 834 TCACAATAACTTGGTCAAAAACCAAGTATATTGCGCAATAGAAAAGGCAATAATTTCATG 893 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1522 TCACAATAACTTGGTCAAAAACCAAGTATATTGCGCAATAGAAAAGGCAATAATTTCATG 1581 Query 894 ATTGTAAAGAAAA 906 ||||||||||||| Sbjct 1582 ATTGTAAAGAAAA 1594 >c55628/f2p1/1653 isoform=c55628;full_length_coverage=2;non_full_length_coverage=1;isoform_length=1653 Length=1653 Score = 1507 bits (816), Expect = 0.0 Identities = 842/854 (99%), Gaps = 4/854 (0%) Strand=Plus/Plus Query 54 ACGAGTGGTAACTCTACACACCACACCCACACCACTGGTAACTCCACACACCACACCCAC 113 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 690 ACCAGTGGTAACTCTACACACCACACCCACACCACTGGTAACTCCACACACCACACCCAC 749 Query 114 ACGTCTGATATCACCACCATGACGCGAATCCAAGATGGCGACCATCAGACAGACGTCCTC 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 750 ACGTCTGATATCACCACCATGACGCGAATCCAAGATGGCGACCATCAGACAGACGTCCTC 809 Query 174 CAAGTCCCAAGCTCACGAATCAAGGCACTGACATTGAAACACATCGAGGCACTCGGAGTA 233 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 810 CAAGTCCCAAGCTCACG-ATCAAGGCACTCACATTGAAACACATCGAGGCACTCGGAGTA 868 Query 234 CCGGTGAAAACTTTTGTCCTGTCCAGGAATCGAACTCCGCCCCCCAGTCCCCTACCCGCT 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 869 CCGGTGAAAACTTTTGTCCTGTCCAGGAATCGAACTCCGCCCCCCAGTCCCCTA-CCGCT 927 Query 294 AGTAATATCAACATTATCAACACGGCTGTTAAGGATAGCAACAATAATAGTAATGTGCTG 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 928 AGTAATATCAACATTATCAACACGGCTGTTAAGGATAGCAACAATAATAGTAATGTGCTG 987 Query 354 GAGATCAACACGACGCTGGCAGTGTCTAACACGAGTACTATTGTTAGTCATAGCGGCAGT 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 988 GAGATCAACACGACGCTGGCAGTGTCTAACACGAGTACTATTGTTAGTCATAGCGGCAGT 1047 Query 414 AGTAATAGTCATGTGAGTAACGGTACACAGTTGTCGCCTCACTACACCAATATGGATACC 473 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1048 AGTAATAGTCATGTGAGTAACGGTACACAGTTGTCGCCTCACTACACCAATCTGGATACC 1107 Query 474 CTCAACAATAACACCAACACACCAAATACCCAACCCACGGGCTTACCTATGACCCCGAAC 533 ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct 1108 CTCAATAATAACACCAACACACCAAATAACCAACCCACAGGCTTACCTATGACCCCGAAC 1167 Query 534 ACACCTAGTAACCCAGTAAGCTTTGTTCATGCGACTAGTACA-CCTATATCCATACCCAA 592 |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 1168 ACACCTAGTAACCCAGTAAGCTTTGTTCATGCAACTAGTACACCCTATATCCATACCCAA 1227 Query 593 TGCTGTTCTGGCATCTAGCTTACTAACTCCGGCGACATCTCCTTCCTGCAGTCCTGCTAG 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1228 TGCTGTTCTGGCATCTAGCTTACTAACTCCGGCGACATCTCCTTCCTGCAGTCCTGCTAG 1287 Query 653 TTCCTATCATTCCTTGTAGTTATCCCAAGTCTCCTTATCTCTTGCTTACTACACTAGACA 712 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1288 TTCCTATCATTCCTTGTAGTTATCCCAAGTCTCCTTATCTCTTGCTTACTACACTAGACA 1347 Query 713 TCCTTTTGTAGCTCTTGATATCTGGTTCTTTAGCTTCTTGTGTCCTAAGCTATGCTAGAA 772 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1348 TCCTTTTGTAGCTCTTGATATCTGGTTCTTTAGCTTC-TGTGTCCTAAGCTATGCTAGAA 1406 Query 773 TTTCAACTTAAACATGTTTTGTTGCGGCTTCACATTAACTGTTTTTCACATAATCCATTA 832 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1407 TTTCAACTTAAACATGTTTTGTTGCGGCTTCACATTAACTGTTTTTCACATAATCCATTA 1466 Query 833 ATCACAATAACTTGGTCAAAAACCAAGTATATTGCGCAATAGAAAAGGCAATAATTTCAT 892 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1467 ATAACAATAACTTGGTCAAAAACCAAGTATATTGCGCAATAGAAAAGGCAATAATTTCAT 1526 Query 893 GATTGTAAAGAAAA 906 |||||||||||||| Sbjct 1527 GATTGTAAAGAAAA 1540 >c4652/f2p1/322 isoform=c4652;full_length_coverage=2;non_full_length_coverage=1;isoform_length=322 Length=322 Score = 351 bits (190), Expect = 7e-96 Identities = 207/214 (97%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 693 CTTGCTTACTACACTAGACATCCTTTTGTAGCTCTTGATATCTGGTTCTTTAGCTTCTTG 752 ||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 1 CTTGCTTGCTACACTAGACATCCTTTTGTAGCTCTTGATATCTGGTT--TTAG---CTTG 55 Query 753 TGTCCTAAGCTATGCTAGAATTTCAACTTAAACATGTTTTGTTGCGGCTTCACATTAACT 812 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56 TGTCCTAAGCTATGCTAGAATTTCAACTTAAACATGTTTTGTTGCGGCTTCACATTAACT 115 Query 813 GTTTTTCACATAATCCATTAATCACAATAACTTGGTCAAAAACCAAGTATATTGCGCAAT 872 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 116 GTTTTTCACATGATCCATTAATCACAATAACTTGGTCAAAAACCAAGTATATTGCGCAAT 175 Query 873 AGAAAAGGCAATAATTTCATGATTGTAAAGAAAA 906 |||||||||||||||||||||||||||||||||| Sbjct 176 AGAAAAGGCAATAATTTCATGATTGTAAAGAAAA 209 Lambda K H 1.35 0.627 1.14 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66494266960 Database: SS_all_quivered_hq.fasta Posted date: Feb 25, 2019 4:32 PM Number of letters in database: 76,657,983 Number of sequences in database: 42,166 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5