BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Candidatus_Liberibacter_asiaticus_psy62_genome.fasta 1 sequences; 1,227,328 total letters Query= contig_000000000001 Length=458 Score E Sequences producing significant alignments: (Bits) Value gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus ... 841 0.0 >gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus str. psy62 chromosome, complete genome Length=1227328 Score = 841 bits (455), Expect = 0.0 Identities = 457/458 (99%), Gaps = 0/458 (0%) Strand=Plus/Minus Query 1 ATCCGCTCTTGGTAAGGAATTTTTCGTTTCTGTTGGGATGAAATCAACATGTAATGGGAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 305349 ATCCGCTCTTGGTAAGGAATTTTTCGTTTCTGTTGGGATGAAATCAACATGTAATGGGAA 305290 Query 61 GAATATATCTGTTTCTTCAAATCAAATGAGTGATAGTCTAGCGATTATGGCGAGTGATGT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 305289 GAATATATCTGTTTCTTCAAATCAAATGAGTGATAGTCTAGCGATTATGGCGAGTGATGT 305230 Query 121 TTCATTAAAGGGATTAGATTCCTATGTTCGCTTCCGGCGACAATCTTCTATATCCTCTTT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 305229 TTCATTAAAGGGATTAGATTCCTATGTTCGCTTCCGGCGACAATCTTCTATATCCTCTTT 305170 Query 181 GTGTTTGCGTATATTAATGATTGCAAGTGGAGAAGTAGATGTCCTTATCGTTGATCGAAA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 305169 GTGTTTGCGTATATTAATGATTGCAAGTGGAGAAGTAGATGTCCTTATCGTTGATCGAAA 305110 Query 241 TGCCAATGATTGGGATCTTGCTGCTGCTGATTTATTGCTTGAGTGTTCTGGTGGTGTGTT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 305109 TGCCAATGATTGGGATCTTGCTGCTGCTGATTTATTGCTTGAGTGTTCTGGTGGTGCGTT 305050 Query 301 GGTTGATATAGATAGAAAATTATTGACGTACAATCGTTCTCAAGTAAATCATGAAGTGTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 305049 GGTTGATATAGATAGAAAATTATTGACGTACAATCGTTCTCAAGTAAATCATGAAGTGTT 304990 Query 361 ATTTGCTTCTGCTAAGTGGCATTTCCCATCTTTTAAGCAACATTTATCAACTTTATAGGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 304989 ATTTGCTTCTGCTAAGTGGCATTTCCCATCTTTTAAGCAACATTTATCAACTTTATAGGA 304930 Query 421 TGTGATTGAACAAAATTTTTTGCTTTTAAGGAGTGAAA 458 |||||||||||||||||||||||||||||||||||||| Sbjct 304929 TGTGATTGAACAAAATTTTTTGCTTTTAAGGAGTGAAA 304892 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 537560904 Query= contig_000000000002 Length=495 Score E Sequences producing significant alignments: (Bits) Value gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus ... 881 0.0 >gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus str. psy62 chromosome, complete genome Length=1227328 Score = 881 bits (477), Expect = 0.0 Identities = 489/495 (99%), Gaps = 0/495 (0%) Strand=Plus/Plus Query 1 GTTGGGGAATTGATCATAAACGTTGCTTAGAAAATTTAACATTATTGCGTCAACAAACTA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 611734 GTTGGGGAATTGATCATAAACGTTGCTTAGAAAATTTAACATTATTGCGTCAACAAACTA 611793 Query 61 ATCTACGAGATAGATTCAAGGCGATATATAATAAGCCTTATACATCATCATCGCAAGACG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 611794 ATCTACGAGATAGATTCAAGGCGATATATAATAAGCCTTATACATCATCATCGCAAGACG 611853 Query 121 TAGATTCTCAACTATATGATGGAATTTTTGCAGATGTAGACCGTCAAATAATGGATCGTA 180 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 611854 TAGATTCTCAACTATATGATGGTTTTTTTGCAGATGTAGACCGTCAAATAATGGATCGTA 611913 Query 181 TACTACGTACTCCACCGGAACAATTATCAACGTTAATTCTGCCATTCAGTGATCGGCGAT 240 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 611914 TACTTCGTACTGCACCGGAACAATTATCAACGTTAAATCTGCCATTCAGTGATCGGCGAT 611973 Query 241 TGCCTGAATTATTCTTTCGTTATAGAGCGCGCAATTTTCCCCATACACTATGTGAAAAAG 300 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 611974 TGCCTGAATTATTCTTTCGTTATAGAGCGCGCAATTTTCCCCATACACTAAGTGAAAAAG 612033 Query 301 AGAAACAAGATTGGTTAGAGCATCGCAAGAAAATGCTCACGCGGTCTCGCATTGAAGAGT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 612034 AGAAACAAGATTGGTTAGAGCATCGCAAGAAAATGCTCACGCGGTCTCGCATTGAAGAGT 612093 Query 361 ATAAAAATAAACTACAGAGTCTCAGTGGCGAATACAAAGGAGACGAAGGAAAAGAAGGGC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 612094 ATAAAAATAAACTACAGAGTCTCAGTGGCGAATACAAAGGAGACGAAGGAAAAGAAGGGC 612153 Query 421 TAATTAATGCGTTGTACGAATATCTTCAATGGGTTATTCCGAAGGAATAACAATTTTGTC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 612154 TAATTAATGCGTTGTACGAATATCTTCAATGGGTTATTCCGAAGGAATAACAATTTTGTC 612213 Query 481 TTGTGAAAACGAAAT 495 ||||||||||||||| Sbjct 612214 TTGTGAAAACGAAAT 612228 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 582971300 Query= contig_000000000003 Length=378 ***** No hits found ***** Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 439376264 Query= contig_000000000004 Length=557 ***** No hits found ***** Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 659064396 Query= contig_000000000005 Length=559 ***** No hits found ***** Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 661519012 Query= contig_000000000006 Length=453 ***** No hits found ***** Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 531424364 Query= contig_000000000007 Length=470 ***** No hits found ***** Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 552288600 Query= contig_000000000008 Length=457 Score E Sequences producing significant alignments: (Bits) Value gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus ... 845 0.0 >gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus str. psy62 chromosome, complete genome Length=1227328 Score = 845 bits (457), Expect = 0.0 Identities = 457/457 (100%), Gaps = 0/457 (0%) Strand=Plus/Minus Query 1 TTGCAAAAGGTTGAAATTACTGATCCCGCTGATACCGAGTATATATTAGGGGATAATGTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20358 TTGCAAAAGGTTGAAATTACTGATCCCGCTGATACCGAGTATATATTAGGGGATAATGTT 20299 Query 61 GATCGCATTGAAGTAGAAGAGTTGAATAGGAGTCTTGCGCAACAAGGGAAAAAATTGGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20298 GATCGCATTGAAGTAGAAGAGTTGAATAGGAGTCTTGCGCAACAAGGGAAAAAATTGGTT 20239 Query 121 TCTTTCTCTCCTATCCTTCAAGGTATTACAAAAGCTTCTCTACAGACTAAGTCTTTTATA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20238 TCTTTCTCTCCTATCCTTCAAGGTATTACAAAAGCTTCTCTACAGACTAAGTCTTTTATA 20179 Query 181 TCAGCGGCTTCTTTTCAGGAAACAACGAAAGTTCTTACTGAAGCAGCTATCGCTGGTAAA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20178 TCAGCGGCTTCTTTTCAGGAAACAACGAAAGTTCTTACTGAAGCAGCTATCGCTGGTAAA 20119 Query 241 GTTGATACTTTAGATGGGTTTAAAGAAAATGTTATTGTAGGTCGTAGTATTCCTGCTGGA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20118 GTTGATACTTTAGATGGGTTTAAAGAAAATGTTATTGTAGGTCGTAGTATTCCTGCTGGA 20059 Query 301 ACAGGGGCTATTTTACATGAGAAACGACGTGTTGCTATGAATAGAGACCAGATGATTCTA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20058 ACAGGGGCTATTTTACATGAGAAACGACGTGTTGCTATGAATAGAGACCAGATGATTCTA 19999 Query 361 AAAGAAAGATCTAATTTTTCGCAGAATGAAGATTTGAAAAATACGGCTATTCAGGGGAGT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 19998 AAAGAAAGATCTAATTTTTCGCAGAATGAAGATTTGAAAAATACGGCTATTCAGGGGAGT 19939 Query 421 ATAGCGGAGTAATCAAGATATGGTTTTGTTTATTTGA 457 ||||||||||||||||||||||||||||||||||||| Sbjct 19938 ATAGCGGAGTAATCAAGATATGGTTTTGTTTATTTGA 19902 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 536333596 Query= contig_000000000009 Length=728 Score E Sequences producing significant alignments: (Bits) Value gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus ... 1345 0.0 >gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus str. psy62 chromosome, complete genome Length=1227328 Score = 1345 bits (728), Expect = 0.0 Identities = 728/728 (100%), Gaps = 0/728 (0%) Strand=Plus/Plus Query 1 ATTTATTGCTCACGTTCGACAAATGCCTTTGGGCACTGACGTATTTGTCTACTATCTTCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868224 ATTTATTGCTCACGTTCGACAAATGCCTTTGGGCACTGACGTATTTGTCTACTATCTTCT 868283 Query 61 CATGGAGGTGGATTTTGAAAAAATGATCGCTGGTGCTAGAGCTGGAGCGAATAGCTTTTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868284 CATGGAGGTGGATTTTGAAAAAATGATCGCTGGTGCTAGAGCTGGAGCGAATAGCTTTTT 868343 Query 121 ACTCAAACCTTTTAACCGCGAAACTCTTCGATTCGCAATGAGAGAATTGCCACAAATGCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868344 ACTCAAACCTTTTAACCGCGAAACTCTTCGATTCGCAATGAGAGAATTGCCACAAATGCA 868403 Query 181 AAAATCGAAAGATGAAAATCAGTTTTTGGATGCAATTTAAGTACGAGAATCTTTCTTATT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868404 AAAATCGAAAGATGAAAATCAGTTTTTGGATGCAATTTAAGTACGAGAATCTTTCTTATT 868463 Query 241 GATAATCAGTAAGCTAAGCAAGTAAGCAGGGGGGGAGAAAAGACGGTTTCTCCCCTACGT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868464 GATAATCAGTAAGCTAAGCAAGTAAGCAGGGGGGGAGAAAAGACGGTTTCTCCCCTACGT 868523 Query 301 ATAACCATCATACCAAAATTCACCTTTATGCTGTTTCGAGATACTCACATGTTTCGTCTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868524 ATAACCATCATACCAAAATTCACCTTTATGCTGTTTCGAGATACTCACATGTTTCGTCTT 868583 Query 361 TTGCGTTCTCTCTCAACACATATCCACGTCCCCAGACTGTTTCGATGTAATTTTTTCCTC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868584 TTGCGTTCTCTCTCAACACATATCCACGTCCCCAGACTGTTTCGATGTAATTTTTTCCTC 868643 Query 421 CAGCTGCATTGCTGAGCTTTTTGCGTAGTTTGCAAATAAATACATCAATAATTTTTACTT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868644 CAGCTGCATTGCTGAGCTTTTTGCGTAGTTTGCAAATAAATACATCAATAATTTTTACTT 868703 Query 481 CTGGTTCGTCTCTGCCATCATACAGATGATTGAGAAACATTTCTTTGGTGAGAGTTGTGT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868704 CTGGTTCGTCTCTGCCATCATACAGATGATTGAGAAACATTTCTTTGGTGAGAGTTGTGT 868763 Query 541 TTTTACGGAGAGATAACAACTCTATCATCTGGTATTCTTTGCCAGTGAGATGAATTCTAT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868764 TTTTACGGAGAGATAACAACTCTATCATCTGGTATTCTTTGCCAGTGAGATGAATTCTAT 868823 Query 601 GACCTTGAACTTCCACAGTTTTTGCATCAAGGTTGACTGATAGGTCTCCGGTGACAATGA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868824 GACCTTGAACTTCCACAGTTTTTGCATCAAGGTTGACTGATAGGTCTCCGGTGACAATGA 868883 Query 661 GTGACTGGGCATGTCCTCTAGATCTACGCACGATTGCACGTATGCGTGCTACAAGTTCTT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868884 GTGACTGGGCATGTCCTCTAGATCTACGCACGATTGCACGTATGCGTGCTACAAGTTCTT 868943 Query 721 CCTTATTA 728 |||||||| Sbjct 868944 CCTTATTA 868951 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 867706049 Query= contig_000000000010 Length=445 Score E Sequences producing significant alignments: (Bits) Value gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus ... 822 0.0 >gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus str. psy62 chromosome, complete genome Length=1227328 Score = 822 bits (445), Expect = 0.0 Identities = 445/445 (100%), Gaps = 0/445 (0%) Strand=Plus/Plus Query 1 TGCAATTTCTTCTATCCCTGAAAAATTACTCAAGTGCGCAGGAGCAATCGTAGTAATTAC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1100976 TGCAATTTCTTCTATCCCTGAAAAATTACTCAAGTGCGCAGGAGCAATCGTAGTAATTAC 1101035 Query 61 CGCTATATGAGGACGAACTAAATGTGTTAAAAAACGGATTTCACCTAAATGGCTCATTCC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1101036 CGCTATATGAGGACGAACTAAATGTGTTAAAAAACGGATTTCACCTAAATGGCTCATTCC 1101095 Query 121 TAGTTCAAAAATCCCAAAATCTACATCTACAGGCATGCGTGCTAACGTTAATGGAACTCC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1101096 TAGTTCAAAAATCCCAAAATCTACATCTACAGGCATGCGTGCTAACGTTAATGGAACTCC 1101155 Query 181 AATATGATTATTATATGAACCAATACAAGCATAGGTCTTCTTTATAGACGACAAGGCGAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1101156 AATATGATTATTATATGAACCAATACAAGCATAGGTCTTCTTTATAGACGACAAGGCGAT 1101215 Query 241 AGTGAGCATTTCTTTCGTAGTAGTTTTACCAACAGAACCAGTAATGGCAATAATTGTCGC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1101216 AGTGAGCATTTCTTTCGTAGTAGTTTTACCAACAGAACCAGTAATGGCAATAATTGTCGC 1101275 Query 301 CTTAGAACGAAGGCGTGCAGCTACCGCAAGTTTGTTTAAAGCACCCAAAACATCATCCAC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1101276 CTTAGAACGAAGGCGTGCAGCTACCGCAAGTTTGTTTAAAGCACCCAAAACATCATCCAC 1101335 Query 361 ACCAAAAACAGGAATAGATAATGATCCTATAGACGCAACCATATCTGTATTGACAACCAC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1101336 ACCAAAAACAGGAATAGATAATGATCCTATAGACGCAACCATATCTGTATTGACAACCAC 1101395 Query 421 AAGACCAGCACCTTTTTGCACTGCG 445 ||||||||||||||||||||||||| Sbjct 1101396 AAGACCAGCACCTTTTTGCACTGCG 1101420 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 521605900 Query= contig_000000000011 Length=440 ***** No hits found ***** Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 515469360 Query= contig_000000000012 Length=514 Score E Sequences producing significant alignments: (Bits) Value gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus ... 856 0.0 >gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus str. psy62 chromosome, complete genome Length=1227328 Score = 856 bits (463), Expect = 0.0 Identities = 497/514 (97%), Gaps = 0/514 (0%) Strand=Plus/Minus Query 1 GGGCAAAAGCCCAAAATTCTTATTCCTTTCCGAATGAATAAAGAAGGGATTAAGAAGAAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1225995 GGGCAAAAGCCCAAAATTCTTATTCCTTTCCGAATGAATAAAGAAGGGATTAAGAAGAAG 1225936 Query 61 AAAACGACTGAAAGTACCCAAGGGCATCTTGATATTTTGGGTTGTGGTCAATACTTCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1225935 AAAACGACTGAAAGTACCCAAGGGCATCTTGATATTTTGGGTTGTGGTCAATACTTCGTT 1225876 Query 121 GCCTATAATATCCACCCTAAAACAAAAAAAGAATACACATGGACGACCCCGCCCCATAGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1225875 GCCTATAATATCCACCCTAAAACAAAAAAAGAATACACATGGACGACCCCGCCCCATAGA 1225816 Query 181 TTTAAAGCGGAAGATATCCCCTTGCTTTCCGAAGAAGATGTTGAATATCTTTTTAAGTTT 240 ||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1225815 TTTAAAGTGGAAGATACCCCTTTGCTTTCCGAAGAAGATGTTGAATATCTTTTTAAGTTT 1225756 Query 241 TTTCAAGAGATTACCGTGCCACTGGTAAAAGATAAAAAATCGATTATACCCTCTAAAACG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1225755 TTTCAAGAGATTACCGTGCCACTGGTAAAAGATAAAAAATCGATTATACCCTCTAAAACG 1225696 Query 301 TGGACTAACAACAATAATAGACAGTACACCAATAGAGAAATAACCGCCTTTTTATCTTGT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1225695 TGGACTAACAACAATAATAGACAGTACACCAATAGAGAAATAACCGCCTTTTTATCTTGT 1225636 Query 361 TTTGGCGAAGAATTTTACAACGGTTCTCACGATGAATGGATACCCGTTGTTATGGCTGTT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1225635 TTTGGCGAAGAATTTTACAACGGTTCTCACGATGAATGGATACCCGTTGTTATGGCTGTT 1225576 Query 421 CATCACGAAACACAAGGATCACCTGCGGGTAAAGAACTTGCTAAACGGTGGAGTAAGCAG 480 ||||||||||| ||||||| | ||||||||| | |||| | | |||||||| ||| Sbjct 1225575 CATCACGAAACGAGAGGATCAAGTAAAGGTAAAGAAATAGCTAGAAGATGGAGTAAACAG 1225516 Query 481 GGATCAACCTATGATGAAGAGAATTTTAATTATA 514 |||||||||||||||||||||||||||||||||| Sbjct 1225515 GGATCAACCTATGATGAAGAGAATTTTAATTATA 1225482 Score = 104 bits (56), Expect = 2e-23 Identities = 104/128 (81%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 313 AATAATAGACAGTACACCAATAGAGAAATAACCGCCTTTTTATCTTGTTTTGGCGAAGAA 372 |||||||||| || ||||| | |||||||| || ||||||||||||||||| ||||| Sbjct 1189518 AATAATAGACGTTATACCAACATAGAAATAAGAGCTTTTTTATCTTGTTTTGGTGAAGAG 1189459 Query 373 TTTTACAACGGTTCTCACGATGAATGGATACCCGTTGTTATGGCTGTTCATCACGAAACA 432 ||||| || || || || || ||||||||||| ||||| |||||| ||||| | ||||| Sbjct 1189458 TTTTATAATGGCTCGCATGACGAATGGATACCTGTTGTGATGGCTATTCATTATGAAACT 1189399 Query 433 CAAGGATC 440 | ||||| Sbjct 1189398 CGTGGATC 1189391 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 606290152 Query= contig_000000000013 Length=328 ***** No hits found ***** Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 378010864 Query= contig_000000000014 Length=495 Score E Sequences producing significant alignments: (Bits) Value gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus ... 915 0.0 >gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus str. psy62 chromosome, complete genome Length=1227328 Score = 915 bits (495), Expect = 0.0 Identities = 495/495 (100%), Gaps = 0/495 (0%) Strand=Plus/Minus Query 1 AGCAAATATGCCACCGATTTTTATATTGATTAATATCGCTAGTAAAGATCTTTTAGACAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389586 AGCAAATATGCCACCGATTTTTATATTGATTAATATCGCTAGTAAAGATCTTTTAGACAA 389527 Query 61 TGAATTATGTGAAGGTATGCAGGCTTTGATTTCTAAGACACTGTATTCTCCTAGTAGGAT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389526 TGAATTATGTGAAGGTATGCAGGCTTTGATTTCTAAGACACTGTATTCTCCTAGTAGGAT 389467 Query 121 TAAGTTGTCATTTTCTGAATCTGTTGTGATGGGTAACCCCGAAAGGAGTCGGTTGTTACT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389466 TAAGTTGTCATTTTCTGAATCTGTTGTGATGGGTAACCCCGAAAGGAGTCGGTTGTTACT 389407 Query 181 TGGTAGGCTGCGAAAAATAGGAATTAGTTTAACTCTTGATGATTTTGGAACGAAATGCTC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389406 TGGTAGGCTGCGAAAAATAGGAATTAGTTTAACTCTTGATGATTTTGGAACGAAATGCTC 389347 Query 241 ATTATTGTCATATCTCGGATATATTCCGTTTGATACGGTAAAATTTAATGGATCTTTAAT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389346 ATTATTGTCATATCTCGGATATATTCCGTTTGATACGGTAAAATTTAATGGATCTTTAAT 389287 Query 301 GACTGGTTCTACAGAAAAGCGTATTGCTATATTACGTTCGATCATTCCAATGGCAAAAAA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389286 GACTGGTTCTACAGAAAAGCGTATTGCTATATTACGTTCGATCATTCCAATGGCAAAAAA 389227 Query 361 TATAGAGACGACGATAATTGCCAAGGATATTTATGGAGAGATTGATATCAAAGAGCTTAC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389226 TATAGAGACGACGATAATTGCCAAGGATATTTATGGAGAGATTGATATCAAAGAGCTTAC 389167 Query 421 TAGGATGGGATGTGATTATATCCAAGATTCTCATGTTGCTTCACCTCTGGGATTTAATTC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389166 TAGGATGGGATGTGATTATATCCAAGATTCTCATGTTGCTTCACCTCTGGGATTTAATTC 389107 Query 481 TATATTGAAATTATT 495 ||||||||||||||| Sbjct 389106 TATATTGAAATTATT 389092 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 582971300 Query= contig_000000000015 Length=830 ***** No hits found ***** Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 992891363 Query= contig_000000000016 Length=858 ***** No hits found ***** Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 1027255959 Database: Candidatus_Liberibacter_asiaticus_psy62_genome.fasta Posted date: Jul 20, 2015 1:36 PM Number of letters in database: 1,227,328 Number of sequences in database: 1 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5