BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Dcitr_OGSv2.0_rna.fa 25,292 sequences; 49,157,538 total letters Query= Untitled_sequence Length=510 Score E Sequences producing significant alignments: (Bits) Value DcitrM039080.1.1Androgen-induced gene 1 protein (AHRD V3.11 *** t... 501 2e-141 DcitrM039080.1.3Androgen-induced gene 1 protein (AHRD V3.11 *** t... 425 2e-118 DcitrM039080.1.2Androgen-induced gene 1 protein (AHRD V3.11 *** t... 425 2e-118 >DcitrM039080.1.1 Androgen-induced gene 1 protein (AHRD V3.11 *** tr|A0A146LCA7|A0A146LCA7_LYGHE). Similar to MCOT00304.2.CO. AED 0.15| InterPro:IPR006838,Pfam:PF04750| GO:0016021 Length=1762 Score = 501 bits (271), Expect = 2e-141 Identities = 426/502 (85%), Gaps = 6/502 (1%) Strand=Plus/Minus Query 12 GAAAACCCTTTGAAGTTTCAACAAATTTTCCCCTTCGTATAGTTTACTTAAAAGGACCCC 71 ||||| |||||| || ||||||||| |||| ||||||| ||||||||||| ||||| | | Sbjct 1691 GAAAAGCCTTTGTAGCTTCAACAAAATTTCACCTTCGTGTAGTTTACTTAGAAGGAGCAC 1632 Query 72 TACTTTAATACTAACAAAAAAAAGGAGGGACCCTAAAACCAACAAAGGGTTTTTGATAGG 131 || ||||||||||||| | ||| | ||| |||| |||||||| || || ||||||||| Sbjct 1631 TAACTTAATACTAACAAGAGAAATAAAGGAACCTAGAACCAACAGAGTGTATTTGATAGG 1572 Query 132 CTTACGGGTTACTACTATCATTTCT-CCCC-CTT--TTAAAAATGAACCCTATCCCATAC 187 | ||| |||||||||||||| |||| |||| || ||||| ||| | ||||||||||| Sbjct 1571 CATACAGGTTACTACTATCAATTCTACCCCATTTACTTAAAGATGTAACCTATCCCATAT 1512 Query 188 AAGGTATTTTGTATAATTTCAATACTTATAGCCTTTACCCGGGAATAGGAAAAACTTAAA 247 || | || ||||||||| |||||||||||||| ||| || | ||||||||||| |||| Sbjct 1511 AATGAATATTGTATAATGTCAATACTTATAGCACTTAACCAAGTATAGGAAAAACATAAA 1452 Query 248 CAAACTTTTTGG-GGGAAATTTTTCTTGAATCCAATCTTGTTGCCCCGGGTTTTCTACTT 306 ||||| | |||| | || | ||||||||||||||||||||||| |||||| ||||||||| Sbjct 1451 CAAACATATTGGTGCGATA-TTTTCTTGAATCCAATCTTGTTGTCCCGGGCTTTCTACTT 1393 Query 307 CTTCTTTTTCTGGGATTTCTTCCCGGGTGGGCCCCAAATGATCTTGTTGATCCCCCAACC 366 ||||||||||| |||||||||| | ||| ||||||| |||||||||||||| |||| | | Sbjct 1392 CTTCTTTTTCTTGGATTTCTTCTCTGGTTGGCCCCAGATGATCTTGTTGATACCCCGAGC 1333 Query 367 TCCAAACAGGATTAGGGTTTCTACTATAAGGCAAAGGGGAAACATAACTTTCCTCAGGGG 426 ||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| Sbjct 1332 TCCAAACAGGATTAGGGTTTCTACTATAAGGCAGAGGGCGAACATAACTATCCTCAGGGG 1273 Query 427 CCAGTTGAGCTTGCCAAAAATGGGGAAAATCCAAAAATTCCCCGCCAAGAAAGTGTTGAT 486 ||||||||||||| |||| |||||| | ||||| | |||| ||| |||| |||||||||| Sbjct 1272 CCAGTTGAGCTTGTCAAAGATGGGGTAGATCCAGAGATTCTCCGTCAAGTAAGTGTTGAT 1213 Query 487 TAGGACAAATAAATACCCACCC 508 |||||| ||||||||| || || Sbjct 1212 TAGGACGAATAAATACACAGCC 1191 >DcitrM039080.1.3 Androgen-induced gene 1 protein (AHRD V3.11 *** tr|A0A146LCA7|A0A146LCA7_LYGHE). Similar to MCOT00304.2.CO. AED 0.46| InterPro:IPR006838,Pfam:PF04750| GO:0016021 Length=1393 Score = 425 bits (230), Expect = 2e-118 Identities = 351/410 (86%), Gaps = 6/410 (1%) Strand=Plus/Minus Query 104 CTAAAACCAACAAAGGGTTTTTGATAGGCTTACGGGTTACTACTATCATTTCT-CCCC-C 161 ||| |||||||| || || |||||||||| ||| |||||||||||||| |||| |||| Sbjct 1121 CTAGAACCAACAGAGTGTATTTGATAGGCATACAGGTTACTACTATCAATTCTACCCCAT 1062 Query 162 TT--TTAAAAATGAACCCTATCCCATACAAGGTATTTTGTATAATTTCAATACTTATAGC 219 || ||||| ||| | ||||||||||| || | || ||||||||| |||||||||||||| Sbjct 1061 TTACTTAAAGATGTAACCTATCCCATATAATGAATATTGTATAATGTCAATACTTATAGC 1002 Query 220 CTTTACCCGGGAATAGGAAAAACTTAAACAAACTTTTTGG-GGGAAATTTTTCTTGAATC 278 ||| || | ||||||||||| ||||||||| | |||| | || | |||||||||||| Sbjct 1001 ACTTAACCAAGTATAGGAAAAACATAAACAAACATATTGGTGCGATA-TTTTCTTGAATC 943 Query 279 CAATCTTGTTGCCCCGGGTTTTCTACTTCTTCTTTTTCTGGGATTTCTTCCCGGGTGGGC 338 ||||||||||| |||||| |||||||||||||||||||| |||||||||| | ||| ||| Sbjct 942 CAATCTTGTTGTCCCGGGCTTTCTACTTCTTCTTTTTCTTGGATTTCTTCTCTGGTTGGC 883 Query 339 CCCAAATGATCTTGTTGATCCCCCAACCTCCAAACAGGATTAGGGTTTCTACTATAAGGC 398 |||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct 882 CCCAGATGATCTTGTTGATACCCCGAGCTCCAAACAGGATTAGGGTTTCTACTATAAGGC 823 Query 399 AAAGGGGAAACATAACTTTCCTCAGGGGCCAGTTGAGCTTGCCAAAAATGGGGAAAATCC 458 | |||| ||||||||| ||||||||||||||||||||||| |||| |||||| | |||| Sbjct 822 AGAGGGCGAACATAACTATCCTCAGGGGCCAGTTGAGCTTGTCAAAGATGGGGTAGATCC 763 Query 459 AAAAATTCCCCGCCAAGAAAGTGTTGATTAGGACAAATAAATACCCACCC 508 | | |||| ||| |||| |||||||||||||||| ||||||||| || || Sbjct 762 AGAGATTCTCCGTCAAGTAAGTGTTGATTAGGACGAATAAATACACAGCC 713 >DcitrM039080.1.2 Androgen-induced gene 1 protein (AHRD V3.11 *** tr|A0A146LCA7|A0A146LCA7_LYGHE). Similar to MCOT00304.2.CO. AED 0.41| InterPro:IPR006838,Pfam:PF04750| GO:0016021 Length=2585 Score = 425 bits (230), Expect = 2e-118 Identities = 351/410 (86%), Gaps = 6/410 (1%) Strand=Plus/Minus Query 104 CTAAAACCAACAAAGGGTTTTTGATAGGCTTACGGGTTACTACTATCATTTCT-CCCC-C 161 ||| |||||||| || || |||||||||| ||| |||||||||||||| |||| |||| Sbjct 1339 CTAGAACCAACAGAGTGTATTTGATAGGCATACAGGTTACTACTATCAATTCTACCCCAT 1280 Query 162 TT--TTAAAAATGAACCCTATCCCATACAAGGTATTTTGTATAATTTCAATACTTATAGC 219 || ||||| ||| | ||||||||||| || | || ||||||||| |||||||||||||| Sbjct 1279 TTACTTAAAGATGTAACCTATCCCATATAATGAATATTGTATAATGTCAATACTTATAGC 1220 Query 220 CTTTACCCGGGAATAGGAAAAACTTAAACAAACTTTTTGG-GGGAAATTTTTCTTGAATC 278 ||| || | ||||||||||| ||||||||| | |||| | || | |||||||||||| Sbjct 1219 ACTTAACCAAGTATAGGAAAAACATAAACAAACATATTGGTGCGATA-TTTTCTTGAATC 1161 Query 279 CAATCTTGTTGCCCCGGGTTTTCTACTTCTTCTTTTTCTGGGATTTCTTCCCGGGTGGGC 338 ||||||||||| |||||| |||||||||||||||||||| |||||||||| | ||| ||| Sbjct 1160 CAATCTTGTTGTCCCGGGCTTTCTACTTCTTCTTTTTCTTGGATTTCTTCTCTGGTTGGC 1101 Query 339 CCCAAATGATCTTGTTGATCCCCCAACCTCCAAACAGGATTAGGGTTTCTACTATAAGGC 398 |||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct 1100 CCCAGATGATCTTGTTGATACCCCGAGCTCCAAACAGGATTAGGGTTTCTACTATAAGGC 1041 Query 399 AAAGGGGAAACATAACTTTCCTCAGGGGCCAGTTGAGCTTGCCAAAAATGGGGAAAATCC 458 | |||| ||||||||| ||||||||||||||||||||||| |||| |||||| | |||| Sbjct 1040 AGAGGGCGAACATAACTATCCTCAGGGGCCAGTTGAGCTTGTCAAAGATGGGGTAGATCC 981 Query 459 AAAAATTCCCCGCCAAGAAAGTGTTGATTAGGACAAATAAATACCCACCC 508 | | |||| ||| |||| |||||||||||||||| ||||||||| || || Sbjct 980 AGAGATTCTCCGTCAAGTAAGTGTTGATTAGGACGAATAAATACACAGCC 931 Score = 86.1 bits (46), Expect = 3e-16 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 12 GAAAACCCTTTGAAGTTTCAACAAATTTTCCCCTTCGTATAGTTTACTTAAAAGGACCCC 71 ||||| |||||| || ||||||||| |||| ||||||| ||||||||||| ||||| | | Sbjct 1631 GAAAAGCCTTTGTAGCTTCAACAAAATTTCACCTTCGTGTAGTTTACTTAGAAGGAGCAC 1572 Query 72 TACTTTAATACTAACAAAAAAAAGGAGGGACCCTAAAACC 111 || ||||||||||||| | ||| | ||| |||| |||| Sbjct 1571 TAACTTAATACTAACAAGAGAAATAAAGGAACCTAGAACC 1532 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23534740430 Database: Dcitr_OGSv2.0_rna.fa Posted date: Mar 4, 2018 10:37 PM Number of letters in database: 49,157,538 Number of sequences in database: 25,292 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5