BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Dcitr_OGSv2.0_rna.fa 25,292 sequences; 49,157,538 total letters Query= 31456 Length=444 Score E Sequences producing significant alignments: (Bits) Value DcitrM027035.1.1Unknown protein. AED 0.00 821 0.0 DcitrM026860.1.2Unknown protein. AED 0.00 667 0.0 DcitrM026860.1.1Unknown protein. AED 0.13 667 0.0 >DcitrM027035.1.1 Unknown protein. AED 0.00 Length=1253 Score = 821 bits (444), Expect = 0.0 Identities = 444/444 (100%), Gaps = 0/444 (0%) Strand=Plus/Plus Query 1 ATGATCTCGCGTCTACTAGTGGTTTGTCTAGTGGGGTGGTACTTCTTCGGGCCCACCTGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 149 ATGATCTCGCGTCTACTAGTGGTTTGTCTAGTGGGGTGGTACTTCTTCGGGCCCACCTGG 208 Query 61 TGCTGTCTAATCAACAACTGTCCGGCAGGTGGAAAGCGGTCTGCCCTGATGGCACTGGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 209 TGCTGTCTAATCAACAACTGTCCGGCAGGTGGAAAGCGGTCTGCCCTGATGGCACTGGAG 268 Query 121 GAGCGACGGCAATCTCACCAGAAGCGGGCCAAGCTCTGGAACGACAGAAAGATTATATCG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 269 GAGCGACGGCAATCTCACCAGAAGCGGGCCAAGCTCTGGAACGACAGAAAGATTATATCG 328 Query 181 TGCAATGCGTGGGGTGCCGAGGGGGTGTGTGTGGGCCCCCTCTGTTGCGACCCGTCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 329 TGCAATGCGTGGGGTGCCGAGGGGGTGTGTGTGGGCCCCCTCTGTTGCGACCCGTCAAGA 388 Query 241 AGTGAGGGTGACCCAGGCTCAAAATGTGGCGTAGACTACAAGACCTGTGGTTCTAGCCGG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389 AGTGAGGGTGACCCAGGCTCAAAATGTGGCGTAGACTACAAGACCTGTGGTTCTAGCCGG 448 Query 301 GAAGTAATGGAGGAATATGCCCTGTGTCTATCAAAGGGACTGGCTTGCGATTTGAATACA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 449 GAAGTAATGGAGGAATATGCCCTGTGTCTATCAAAGGGACTGGCTTGCGATTTGAATACA 508 Query 361 CTAAAGTGCTGTAACATGTACGTTATGGTGGTGTCTTACTTTGCCATCGCCAACGCCAGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 509 CTAAAGTGCTGTAACATGTACGTTATGGTGGTGTCTTACTTTGCCATCGCCAACGCCAGA 568 Query 421 CTCCAACCAGGAAAGAAGAAGTAA 444 |||||||||||||||||||||||| Sbjct 569 CTCCAACCAGGAAAGAAGAAGTAA 592 >DcitrM026860.1.2 Unknown protein. AED 0.00 Length=946 Score = 667 bits (361), Expect = 0.0 Identities = 378/386 (98%), Gaps = 1/386 (0%) Strand=Plus/Plus Query 1 ATGATCTCGCGTCTACTAGTGGTTTGTCTAGTGGGGTGGTACTTCTTCGGGCCCACCTGG 60 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 408 ATGATCTCGCGTCTACTAGTGGTTTGTCTAGTGGGGTGGTACTTCTTCGGGTCCACCTGG 467 Query 61 TGCTGTCTAATCAACAACTGTCCGGCAGGTGGAAAGCGGTCTGCCCTGATGGCACTGGAG 120 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 468 TGCTGTCTAATCAACAATTGTCCGACAGGTGGAAAGCGGTCTGCCCTGATGGCACTGGAG 527 Query 121 GAGCGACGGCAATCTCACCAGAAGCGGGCCAAGCTCTGGAACGACAGAAAGATTATATCG 180 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 528 GAGCGACGGCAATCTCACCAGAAGAGGGCCAAGCTCTGGAACGACAGAAACATTATATCG 587 Query 181 TGCAATGCGTGGGGTGCCGAGGGGGTGTGTGTGGGCCCCCTCTGTTGCGACCCGTCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 588 TGCAATGCGTGGGGTGCCGAGGGGGTGTGTGTGGGCCCCCTCTGTTGCGACCCGTCAAGA 647 Query 241 AGTGAGGGTGACCCAGGCTCAAAATGTGGCGTAGACTACAAGACCTGTGGTTCTAGCCGG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 648 AGTGAGGGTGACCCAGGCTCAAAATGTGGCGTAGACTACAAGACCTGTGGTTCTAGTCGG 707 Query 301 GAAGTAATGGAGGAATATGCCCTGTGTCTATCAAAGGGACTGGCTTGCGATTTGAATACA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 708 GAAGTAATGGAGGAATATGCCCTGTGTCTATCAAAGGGACTGGCTTGCGATTTGAATACA 767 Query 361 CTAAAGTGCTGTAACATGTACG-TTA 385 || ||||||||||||||||||| ||| Sbjct 768 CTCAAGTGCTGTAACATGTACGATTA 793 >DcitrM026860.1.1 Unknown protein. AED 0.13 Length=705 Score = 667 bits (361), Expect = 0.0 Identities = 378/386 (98%), Gaps = 1/386 (0%) Strand=Plus/Plus Query 1 ATGATCTCGCGTCTACTAGTGGTTTGTCTAGTGGGGTGGTACTTCTTCGGGCCCACCTGG 60 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 167 ATGATCTCGCGTCTACTAGTGGTTTGTCTAGTGGGGTGGTACTTCTTCGGGTCCACCTGG 226 Query 61 TGCTGTCTAATCAACAACTGTCCGGCAGGTGGAAAGCGGTCTGCCCTGATGGCACTGGAG 120 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 227 TGCTGTCTAATCAACAATTGTCCGACAGGTGGAAAGCGGTCTGCCCTGATGGCACTGGAG 286 Query 121 GAGCGACGGCAATCTCACCAGAAGCGGGCCAAGCTCTGGAACGACAGAAAGATTATATCG 180 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 287 GAGCGACGGCAATCTCACCAGAAGAGGGCCAAGCTCTGGAACGACAGAAACATTATATCG 346 Query 181 TGCAATGCGTGGGGTGCCGAGGGGGTGTGTGTGGGCCCCCTCTGTTGCGACCCGTCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 347 TGCAATGCGTGGGGTGCCGAGGGGGTGTGTGTGGGCCCCCTCTGTTGCGACCCGTCAAGA 406 Query 241 AGTGAGGGTGACCCAGGCTCAAAATGTGGCGTAGACTACAAGACCTGTGGTTCTAGCCGG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 407 AGTGAGGGTGACCCAGGCTCAAAATGTGGCGTAGACTACAAGACCTGTGGTTCTAGTCGG 466 Query 301 GAAGTAATGGAGGAATATGCCCTGTGTCTATCAAAGGGACTGGCTTGCGATTTGAATACA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 467 GAAGTAATGGAGGAATATGCCCTGTGTCTATCAAAGGGACTGGCTTGCGATTTGAATACA 526 Query 361 CTAAAGTGCTGTAACATGTACG-TTA 385 || ||||||||||||||||||| ||| Sbjct 527 CTCAAGTGCTGTAACATGTACGATTA 552 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20391222600 Database: Dcitr_OGSv2.0_rna.fa Posted date: Mar 4, 2018 10:37 PM Number of letters in database: 49,157,538 Number of sequences in database: 25,292 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5