BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Candidatus_Liberibacter_asiaticus_gxpsy_proteins.fasta
           1,141 sequences; 332,037 total letters



Query= Untitled_sequence

Length=298
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|470204523|ref|YP_007598621.1|  hypothetical protein WSI_00130 ...  607     0.0  


>gi|470204523|ref|YP_007598621.1| hypothetical protein WSI_00130 [Candidatus Liberibacter asiaticus 
str. gxpsy]
Length=323

 Score = 607 bits (1566),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 298/298 (100%), Positives = 298/298 (100%), Gaps = 0/298 (0%)

Query  1    MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI  60
            MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI
Sbjct  26   MTISFSSYAKAENMHTTSTLLNNNISKGKGKRVVDAQRITCEARLTENSTSIDSGVSWHI  85

Query  61   FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI  120
            FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI
Sbjct  86   FDSISNKKNTLSTTKKIIGGKVSFDLFPGDYLISASFGHVGVVKKITVSSKEKNQKQVFI  145

Query  121  LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSH  180
            LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSH
Sbjct  146  LNAGGIRLYSIYKPGSPIVDDELTFSIYSNPNHKALLITDKVRSGTLVRLGTNNYQITSH  205

Query  181  YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG  240
            YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG
Sbjct  206  YGKYNAIVSTVVKVEPGKIIDVTIQNRAAKITFKLVSEMGGEAVADTAWSILTASGDTVG  265

Query  241  ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNGQHNT  298
            ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNGQHNT
Sbjct  266  ESANASPSMVLSEGDYTVIARNKERNYSREFSVLTGKSTIVEVLMRQKRMDKNGQHNT  323



Lambda      K        H        a         alpha
   0.313    0.129    0.353    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 55463072


  Database: Candidatus_Liberibacter_asiaticus_gxpsy_proteins.fasta
    Posted date:  Jul 20, 2015  1:34 PM
  Number of letters in database: 332,037
  Number of sequences in database:  1,141



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40