BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Dcitri_transcriptome.fasta 60,261 sequences; 104,618,276 total letters Query= Dcitr11g07200.1.1 Length=1842 Score E Sequences producing significant alignments: (Bits) Value DcDTi04583.4Serine proteinase stubble 2582 0.0 DcDTr04583.5Serine proteinase stubble 1286 0.0 DcDTi04583.3Unknown protein 1221 0.0 >DcDTi04583.4 Serine proteinase stubble Length=3429 Score = 2582 bits (1398), Expect = 0.0 Identities = 1510/1559 (97%), Gaps = 28/1559 (2%) Strand=Plus/Plus Query 146 GTCTCAAGATCAACCCCAAGCCCTGCTCTGTG-AACAGTGTGGAGGGGAGGTGCATGTTT 204 ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 859 GTCTCAAGATC-ACCCCAAACCCTGCTCTGTGAAACAGTGTGGAGGGGAGGTGCATGTTT 917 Query 205 GTCTGGGAGTGTATCAACACGG-ACGGTCATCATTTGGGTATGT-GCGTGGACACGTTCA 262 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct 918 GTCTGGGAGTGTATCAACACGGAACGGTCATCATTTGGGTATGTGGCGTGGACACGTTCA 977 Query 263 TG-TTCGGTAGCTGCTGCTCCCACAATGTGACCAAGAACGAGATCTCTCCCCTCGCCCAG 321 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 978 TGTTTCGGTAGCTGCTGCTCCCACAATGTGACCAAGAACGAGATCTCTCCCCTCGCCCAG 1037 Query 322 GAGAAAACCTCCCCTACACTGCTCTACACGAAACCTTCCACCCCTCATAAAACAT-C-TT 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1038 GAGAAAACCTCCCCTACACTGCTCTACACGAAACCTTCCACCCCTCATAAAACATTCACC 1097 Query 380 CTACCGTGCATAAGCATACAACTCCTATGAAACCTACGCCTACCACGACCATACTG-TAT 438 |||||||||| || ||||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct 1098 CTACCGTGCACAAACATACAACTTCTATGAAA-CTACGCCTACCACGACCATACTGTTAT 1156 Query 439 AGCAAACCTTACCGGCAGACGCCAAGACCAATGCTGTCCTACTACTCTCACAAGGACATT 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1157 AGCAAACCTTACCGGCAGACGCCAAGACCAATGCTGTCCTACTACTCTCACAAGGACATT 1216 Query 499 TCCAGTAAGAACACAACGCAGCGACCTTATGTGAAGCCGCTCAAA-GAATCACTTGGCAG 557 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1217 TCCAGTAAGAACACAACGCAGCGACCTTATGTGAAGCCGCTCAAAGGAATCACTTGGCAG 1276 Query 558 ACCGGTCAATGTGTACAGCAACAATGAGAAAGTCGATGACTTTAGCACGGAGAGTGTGAA 617 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1277 ACCGGTCAATGTGTACAGCAACAATGGAAAAGTCGATGACTTTAGCACGGAGAGTGTGAA 1336 Query 618 TAGGTACCAGAGCACGGAATCCAACCGATACCAGCTCTTTTCTTCGTCCAACACCAACGT 677 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1337 TAGGTACCAGAGCACGGAATCCAACCGATACCAGCTTTTTTCTTCGTCCAACACCAACGT 1396 Query 678 GTACACAAGTTGGACCAAACCTCCTACAACCAGTTCTAGTCAAGAGCAGACTTCGCCAGC 737 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1397 GTACACAAGTTGGACCAAA-CTCCTACAACCAGTTCTAGTCAAGAGCAGACTTCGCCAGC 1455 Query 738 TAGCTCCTCCTTCACTCTGAGACCTTCCATCTATTATACCAGCAAACCTACGTCCTCATC 797 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1456 TAGCTCCTCCTTCACTCTGAGACCTTCCATCTATTATACCAGCAAACCTACGTCCTCATC 1515 Query 798 GTCTAGTCATTATCTTGATAGTTGGAGCTCTGACAGC-AACAACGAGGTGGAGTCTCACA 856 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1516 GTCTAGTCATTATCTTGATAGTTGGAGCTCTGACAGCAAACAACGAGGTGGAGTCTCACA 1575 Query 857 TGGAGACCTCCTGGTCGCAGAAACCCACCTGGCATACCACCTCGCCCCTCCC-TTTCGTC 915 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 1576 TGGAGACCTCCTGGTCGCAGAAACCCACCTGGCATACAACCTCGCCCCTCCCTTTTCGTC 1635 Query 916 ACCCGACCCCGCCCCTCGTCCAACCTCAAA-CCCAAC-AAACCTCACAAGAAGCCTTGGT 973 ||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct 1636 ACCCGACCCCG-CCCTCGTCCAACCTCAAAACCCAACAAAACCTCACAAGAAGCCTTGGT 1694 Query 974 ACACGAGTACCACCACAACCACCACCACGACCACGACCACCACCACAACCACTTCGCCCC 1033 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 1695 ACACGAGTACCACCACAACCACCACCACGACCACGACCACCACCACAACCACTCCGTCCC 1754 Query 1034 CTCCCCCCTCCTCCTCTCCTGCTG--ATATAGTTACCATAGTTACAGCGTCGTTACCACT 1091 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1755 CTCCCCCCTCCTCCTCTCCTGCTGATATATAGTTACCATAGTTACAGCGTCGTTACCACT 1814 Query 1092 TCATCTGCTGGGAAGTCCCACATTGTCCACCTCGACCACGAGTAAACCTAACGCGACACT 1151 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1815 TCATCTGCTGGGAAGTCCCACATTGTCCACCTCGACCACGAGTAAACCTAACGAGACACT 1874 Query 1152 TTCGGCGT-CC-AACAAGCGCGACA-TTCCATGCGGCAAGGCTCCGCTAGTACACAGACA 1208 |||||| | || ||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 1875 TTCGGCATTCCAAACAAGCGCGACATTTCCATGCGGCAAGGCTCCGCTGGTACACAGACA 1934 Query 1209 CGAGGTACGGATTGTGGGCGGACAGAACGCTCAGTTTGGCGAGTGGCCATGGCAGGTGTC 1268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1935 CGAGGTACGGATTGTGGGCGGACAGAACGCTCAGTTTGGCGAGTGGCCATGGCAGGTGTC 1994 Query 1269 CGTGCGGAGGACGTCGTTCTTTGGGTTCTCGAGTACACACAGGTGTGGAGGTGCCTTGCT 1328 ||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct 1995 CGTGCGGAGGACGTCGTTCTTCGGGTTCTCGAGTAC-CACAGGTGTGGAGGCGCCTTGCT 2053 Query 1329 CAATGAGAACTGGATTGCCACTGCTGGACATTGCGTGGACGATTTGCTCACGTCACAAAT 1388 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2054 CAATGAGAACTGGATTGCCACTGCTGGAACTTGCGTGGACGATTTGCTCACGTCACAAAT 2113 Query 1389 CAAAAT-CCGCGTGGGTGAGTACGACTTCTCCAAGCTGGAAGAGCCCTATCCCTACCAGG 1447 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2114 CAAAATCCCGTGTGGGTGAGTACGACTTCTCCAAGCTGGAAGAGCCCTATCCCTACCAGG 2173 Query 1448 AGCGAGGTGTGGTGAAGAAGATGGTTCACCCCAAATACAACTTCTTCACGTACGAATACG 1507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2174 AGCGAGGTGTGGTGAAGAAGATGGTTCACCCCAAATACAACTTCTTCACGTACGAATACG 2233 Query 1508 ATCTGGCCCTGGTTCGCCTGGAAACGCCGGTAGAGTTTGCTCCCAATATTGTTCCTATCT 1567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2234 ATCTGGCCCTGGTTCGCCTGGAAACGCCGGTAGAGTTTGCTCCCAATATTGTTCCTATCT 2293 Query 1568 GTCTCCCTGGATCGGATGATTTGCTGATCGGGGAGAATGCTACCGTCACGGGGTGGGGGC 1627 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| Sbjct 2294 GTCTCCCTGGATCGGATGA-TTGCTGATCGGGGAGAATGCTACTGTCACGGGGT-GGGGC 2351 Query 1628 GGTTGAGTGAA-GGGGGCTCCTTGCCTCCTGTGCTGCAGAAGGTGACAGTT-CCCATAG 1684 ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 2352 GGTTGAGTGAAGGGGGGCTCCTTGCCTCCTGTGCTGCAGAAG-TGACAGTTTCCCATAG 2409 Score = 261 bits (141), Expect = 4e-68 Identities = 156/162 (96%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 1684 GGGGACTCC-GGAGGTCCACTTCAAGTGAAAGGCAAAG-ACGGTC-GGTACTTCTTAGCC 1740 ||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||| Sbjct 2521 GGGGACTCCGGGAGGTCCACTTCAAGTGAAAGGCAAAGTACGGTCGGGTAC-TCTTAGCC 2579 Query 1741 GGCATCATCAGCTGGGGTATAGGCTGCGCAGAAGCGAACCTGCCCGGAGTTTGTACGCGC 1800 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2580 GGCATCATCAGCTAGGGTATAGGCTGCGCAGAAGCGAACCTGCCCGGAGTTTGTACGCGC 2639 Query 1801 ATCTCCAAGTTTGTCCCTTGGGTTTTGGACACGGTCACTTGA 1842 |||||||||||||| ||||||||||||||||||||||||||| Sbjct 2640 ATCTCCAAGTTTGT-CCTTGGGTTTTGGACACGGTCACTTGA 2680 Score = 159 bits (86), Expect = 1e-37 Identities = 89/90 (99%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 54 AGAGGAGCACAGGATGGTGTGGATCATCCTGACAGGCGCTCTTCATGTGTTACTTTGTAT 113 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 360 AGAGGAGCACAGGATGGTGT-GATCATCCTGACAGGCGCTCTTCATGTGTTACTTTGTAT 418 Query 114 AGTACCATCCACTCCTACCTCAATGAGAAA 143 |||||||||||||||||||||||||||||| Sbjct 419 AGTACCATCCACTCCTACCTCAATGAGAAA 448 >DcDTr04583.5 Serine proteinase stubble Length=1132 Score = 1286 bits (696), Expect = 0.0 Identities = 706/711 (99%), Gaps = 0/711 (0%) Strand=Plus/Plus Query 56 AGGAGCACAGGATGGTGTGGATCATCCTGACAGGCGCTCTTCATGTGTTACTTTGTATAG 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 281 AGGAGCACAGGATGGTGTGGATCATCCTGACAGGCGCTCTTCATGTGTTACTTTGTATAG 340 Query 116 TACCATCCACTCCTACCTCAATGAGAAATAGTCTCAAGATCAACCCCAAGCCCTGCTCTG 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 341 TACCATCCACTCCTACCTCAATGAGAAATAGTCTCAAGATCAACCCCAAGCCCTGCTCTG 400 Query 176 TGAACAGTGTGGAGGGGAGGTGCATGTTTGTCTGGGAGTGTATCAACACGGACGGTCATC 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 401 TGAACAGTGTGGAGGGGAGGTGCATGTTTGTCTGGGAGTGTATCAACACGGACGGTCATC 460 Query 236 ATTTGGGTATGTGCGTGGACACGTTCATGTTCGGTAGCTGCTGCTCCCACAATGTGACCA 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461 ATTTGGGTATGTGCGTGGACACGTTCATGTTCGGTAGCTGCTGCTCCCACAATGTGACCA 520 Query 296 AGAACGAGATCTCTCCCCTCGCCCAGGAGAAAACCTCCCCTACACTGCTCTACACGAAAC 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 521 AGAACGAGATCTCTCCCCTCGCCCAGGAGAAAACCTCCCCTACACTGCTCTACACGAAAC 580 Query 356 CTTCCACCCCTCATAAAACATCTTCTACCGTGCATAAGCATACAACTCCTATGAAACCTA 415 |||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||| Sbjct 581 CTTCCACCCCTCATAAAACATCCCCTACCGTGCACAAACATACAACTTCTATGAAACCTA 640 Query 416 CGCCTACCACGACCATACTGTATAGCAAACCTTACCGGCAGACGCCAAGACCAATGCTGT 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 641 CGCCTACCACGACCATACTGTATAGCAAACCTTACCGGCAGACGCCAAGACCAATGCTGT 700 Query 476 CCTACTACTCTCACAAGGACATTTCCAGTAAGAACACAACGCAGCGACCTTATGTGAAGC 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 701 CCTACTACTCTCACAAGGACATTTCCAGTAAGAACACAACGCAGCGACCTTATGTGAAGC 760 Query 536 CGCTCAAAGAATCACTTGGCAGACCGGTCAATGTGTACAGCAACAATGAGAAAGTCGATG 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 761 CGCTCAAAGAATCACTTGGCAGACCGGTCAATGTGTACAGCAACAATGAGAAAGTCGATG 820 Query 596 ACTTTAGCACGGAGAGTGTGAATAGGTACCAGAGCACGGAATCCAACCGATACCAGCTCT 655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 821 ACTTTAGCACGGAGAGTGTGAATAGGTACCAGAGCACGGAATCCAACCGATACCAGCTCT 880 Query 656 TTTCTTCGTCCAACACCAACGTGTACACAAGTTGGACCAAACCTCCTACAACCAGTTCTA 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 881 TTTCTTCGTCCAACACCAACGTGTACACAAGTTGGACCAAACCTCCTACAACCAGTTCTA 940 Query 716 GTCAAGAGCAGACTTCGCCAGCTAGCTCCTCCTTCACTCTGAGACCTTCCA 766 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 941 GTCAAGAGCAGACTTCGCCAGCTAGCTCCTCCTTCACTCTGAGACCTTCCA 991 >DcDTi04583.3 Unknown protein Length=2696 Score = 1221 bits (661), Expect = 0.0 Identities = 1021/1169 (87%), Gaps = 127/1169 (11%) Strand=Plus/Plus Query 620 GGTACCAGAG--CACGGAAT-CCAACCGAT-ACCAG-CTCTT-TTCTTCGTCC-AACACC 672 |||| ||||| |||||||| ||||||||| ||||| ||||| |||||| ||| |||| | Sbjct 556 GGTATCAGAGCACACGGAATCCCAACCGATAACCAGACTCTTCTTCTTCTTCCAAACAGC 615 Query 673 AACGTGT-ACACAAGTTGG--ACC-AA-ACCTCCTACAAC-CAGTTCTAGTCAAGAGCAG 726 ||||||| |||||| |||| ||| || |||||||||||| ||||||||||| ||||||| Sbjct 616 AACGTGTGACACAA-TTGGATACCAAACACCTCCTACAACGCAGTTCTAGTC-AGAGCAG 673 Query 727 ACTTCGCCAGCTA-GCTCCTCCTTCACTC-TGAGACCTTCCATCTATTATA-CCAGCAAA 783 ||||||||||||| ||||||||||||||| |||||||| |||||| ||||| |||||||| Sbjct 674 ACTTCGCCAGCTAGGCTCCTCCTTCACTCATGAGACCTACCATCT-TTATAGCCAGCAAA 732 Query 784 CCTACGTCCT-CATCGT--CTA-GTC-AT-TATC-TT-GATAGTTGGAGCTCTGAC-AGC 834 |||||||||| |||||| ||| ||| || |||| || ||||||| |||||||||| ||| Sbjct 733 CCTACGTCCTGCATCGTAGCTATGTCTATATATCGTTAGATAGTT-GAGCTCTGACGAGC 791 Query 835 A-ACAACGAGGTGGAGTC-TCAC-ATG-GAGACCTCCT-GGTCGC-AGAAACCCAC-C-T 886 | |||||||||||||||| |||| ||| |||||||||| |||||| |||||||||| | | Sbjct 792 ACACAACGAGGTGGAGTCCTCACAATGAGAGACCTCCTGGGTCGCAAGAAACCCACACGT 851 Query 887 GGCATA-C-CACC-TCGCCCCTCCCTTTCGTCACC-CGACCCCGC-CCCTCGTCC-AACC 940 |||||| | ||| |||||||| |||| ||||||| ||||||||| |||||||| |||| Sbjct 852 GGCATAGCAAACCGTCGCCCCTTCCTTGCGTCACCGCGACCCCGCATCCTCGTCCAAACC 911 Query 941 TCAAACCCAACAAACCTC-ACAAGAAGCC-TTGGTAC--ACGAGTAC-CACCACAACCA- 994 ||||||||||||||| || ||||| |||| ||||||| |||||||| ||||||||||| Sbjct 912 TCAAACCCAACAAAC-TCAACAAG-AGCCTTTGGTACAAACGAGTACGCACCACAACCAC 969 Query 995 CCACCACG-ACCACGACCAC-C-ACCACAACCACT-TCG-CCC-CCTCC-CCCCTCCTC- 1046 |||||||| ||||||||||| | |||| ||||||| || ||| | ||| ||||||||| Sbjct 970 CCACCACGAACCACGACCACGCAACCA-AACCACTGCCGTCCCGCATCCACCCCTCCTCT 1028 Query 1047 C-TCTCCTGCT-G-ATATA--GTTACCAT-AGTTACAGC-GT-CGTTACCACTTCATCTG 1098 | ||||||||| | ||||| |||||||| ||||||||| || ||||| ||| ||||||| Sbjct 1029 CGTCTCCTGCTAGAATATAGCGTTACCATAAGTTACAGCAGTCCGTTA-CACGTCATCTG 1087 Query 1099 CTGGGAAGTCCCACATTGTCCACCTCGACCACGAGTAAACCTAACGCGACACTTTCGGCG 1158 ||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 1088 CTGGGAAGT-CCACATTGTCCACCTCGACCACGAGTAAAC-TAACGC-ACACTTTCGGCA 1144 Query 1159 -TCCAA-CAAG-CGCGA-CATTCCATGCGGC-AAGGCTCCGCTAGTACA-CA-GACACGA 1211 ||||| |||| ||||| ||||| ||||||| ||||||||||| ||||| || ||||||| Sbjct 1145 ATCCAAACAAGACGCGAACATTC-ATGCGGCGAAGGCTCCGCTGGTACAACAGGACACGA 1203 Query 1212 GGTACGGA-TTGTGGGCGGACAGAACGCT-CAGTTT-GG-CGAGTGGCCATGGCAGGT-G 1266 |||||||| |||||| || |||||||||| |||||| || |||||||||||||||||| | Sbjct 1204 GGTACGGAATTGTGG-CG-ACAGAACGCTGCAGTTTTGGCCGAGTGGCCATGGCAGGTTG 1261 Query 1267 TCCGTGCGGAGGACGTCGTTCTTTGGGTTC--TCGAGT--A-CACACAGGTGTGGAGGTG 1321 | ||||||||||||||||||||| |||||| |||||| | | |||| ||||||||| | Sbjct 1262 T-CGTGCGGAGGACGTCGTTCTTCGGGTTCGATCGAGTTTAACGCACA-GTGTGGAGGCG 1319 Query 1322 CCTTGCTCAATGAGAACTGGA-TTG-CCACTGCTGGA-CATTGCGTGGACGATTTGCTCA 1378 ||||||||||||||||||||| ||| ||||||||||| || ||| ||||||||| ||||| Sbjct 1320 CCTTGCTCAATGAGAACTGGAATTGGCCACTGCTGGAACACTGC-TGGACGATT-GCTCA 1377 Query 1379 CGTCACAAATCAAAATCCGCGTGGGTGAG-TA-CGAC-TTCTCCAAGCTGGAAGAGCCCT 1435 ||| ||||||||||||||||||||||||| || |||| |||||||||||||||||||||| Sbjct 1378 CGT-ACAAATCAAAATCCGCGTGGGTGAGATAACGACATTCTCCAAGCTGGAAGAGCCCT 1436 Query 1436 ATCCCTA-CCAGGAG-CGAGGTGTGGTGAAGAAG--ATGGTTCACCCCAAATAC-AACTT 1490 ||||||| ||||||| ||||||||||| |||||| |||||||||||||||||| ||||| Sbjct 1437 ATCCCTAACCAGGAGGCGAGGTGTGGT-AAGAAGAAATGGTTCACCCCAAATACAAACTT 1495 Query 1491 CTTCACGTAC-GAATACGATCTGGCCCTGGTT-CGCCTGGAAACGCCGGTAGAGTTTGCT 1548 |||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct 1496 CTTCACGTACTGAATACGAT-TGGCCCTGGTTGCGCCTGGAAACGCGGGTAGAGTTTGCT 1554 Query 1549 C-CCAATATTGTT-C-C-TAT-CTGTCTCCCTGGATCGGATGATTTGCTGATCGGGGAGA 1603 | ||||||||||| | | ||| |||| ||||||||||||| |||| |||||||||||||| Sbjct 1555 CGCCAATATTGTTTCTCCTATTCTGT-TCCCTGGATCGGA-GATTCGCTGATCGGGGAGA 1612 Query 1604 ATGC-TACCGTCA-CGGGGTGGGGGCGG-TTGAGTGAAGGGGGCT-CCT-TGCCTCCTGT 1658 |||| ||| |||| |||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct 1613 ATGCGTACTGTCACCGGGGTGGGGGCGGTTTGAGTGACGGGGGCTGCCTGTGCCTCCTGT 1672 Query 1659 GCTGCAGA-AGGT-GACAGTTCCC-ATAG 1684 |||||||| |||| |||||||||| |||| Sbjct 1673 GCTGCAGACAGGTCGACAGTTCCCCATAG 1701 Score = 200 bits (108), Expect = 8e-50 Identities = 152/170 (89%), Gaps = 16/170 (9%) Strand=Plus/Plus Query 1688 ACTCCGGAGGTCCACTTCAAGTGAAAGGCAAAGAC-GGTCGGT-ACTTCT-T--AGCCGG 1742 ||||||||||||||||||||||||||||||||||| ||||||| | ||| | |||||| Sbjct 1827 ACTCCGGAGGTCCACTTCAAGTGAAAGGCAAAGACCGGTCGGTAAACTCTATAGAGCCGG 1886 Query 1743 CATCATCAGCTGGGGTATA-GGCTGCGC--AGAAGCG-AACCTGCCC-GGAGTT-TGTAC 1796 ||||| ||||||||||||| |||||||| ||||||| ||||||||| |||||| ||||| Sbjct 1887 CATCA-CAGCTGGGGTATAAGGCTGCGCAGAGAAGCGCAACCTGCCCGGGAGTTGTGTAC 1945 Query 1797 -GCGCATCTCCAAGTTTGTCCCTT-GGGTTT-TGGACACGG-TCACTTGA 1842 ||||||||||||||||||||||| |||||| ||||||||| |||||||| Sbjct 1946 GGCGCATCTCCAAGTTTGTCCCTTTGGGTTTATGGACACGGGTCACTTGA 1995 Score = 172 bits (93), Expect = 2e-41 Identities = 187/225 (83%), Gaps = 36/225 (16%) Strand=Plus/Plus Query 56 AGG-AGCACAGGA-TGG-TGTGGATC-AT-CCTG-ACA-G-GCGCTCTTC-ATGTG-TTA 105 ||| ||||||||| ||| |||||||| || |||| ||| | ||||||||| ||||| ||| Sbjct 337 AGGAAGCACAGGATTGGTTGTGGATCAATCCCTGAACAGGTGCGCTCTTCAATGTGTTTA 396 Query 106 CT-TT-GTAT--AGTACC-ATC-CAC-TCCT-ACCTCAATG-AGAAATAGT---CTC-AA 152 || || |||| |||||| ||| ||| |||| ||||||||| ||||||||| ||| || Sbjct 397 CTGTTGGTATGAAGTACCGATCACACATCCTAACCTCAATGAAGAAATAGTACCCTCAAA 456 Query 153 GA-TC-AACCCCAAGCCCTGCTCT--GT-GAACAGTGTGGA-GGGGAGGTGCATGTTT-G 205 || || |||||||||||||||||| || |||||||||||| |||||||||||||||| | Sbjct 457 GAGTCAAACCCCAAGCCCTGCTCTTTGTGGAACAGTGTGGAGGGGGAGGTGCATGTTTTG 516 Query 206 T-CTGGGAGTGTA-TCAACACGGACGGTCAT--CA-TTTGGGTAT 245 | | |||||||| |||||||| |||||||| || ||||||||| Sbjct 517 TACGTGGAGTGTAATCAACACG-ACGGTCATTGCAATTTGGGTAT 560 Lambda K H 1.34 0.622 1.13 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 186929080635 Database: Dcitri_transcriptome.fasta Posted date: Apr 30, 2019 10:57 AM Number of letters in database: 104,618,276 Number of sequences in database: 60,261 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5