BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Cclementina_182_v1.0.cds_primaryTranscriptOnly_annot.fasta
           24,533 sequences; 30,654,468 total letters



Query= Cs1g01030.1

Length=261
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Ciclev10017785mterpene synthase-like sequence-1,8-cineole, simila...  106     7e-23


>Ciclev10017785m terpene synthase-like sequence-1,8-cineole, similar to AT3G25820.1
Length=1746

 Score = 106 bits (57),  Expect = 7e-23
 Identities = 89/105 (85%), Gaps = 0/105 (0%)
 Strand=Plus/Plus

Query  109   TATATGCAGATTTGCTATTTGGCTATGTTCAACTTTGGAAATGACTTGGCATATTATGAT  168
             ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||| | ||| |
Sbjct  1075  TATATGCAGATTTGCTACTTGGCCATGTTTAACTTTGGAAATGAGTTGGCATGTGATGTT  1134

Query  169   CTCAAAATTCATGGCCTGAATTTGCTGTCCAACATTAAGAATGAG  213
              | |||||||||||||| |||   || ||| |||||||||| |||
Sbjct  1135  ATGAAAATTCATGGCCTCAATACTCTATCCTACATTAAGAAAGAG  1179



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 7161469742


  Database: Cclementina_182_v1.0.cds_primaryTranscriptOnly_annot.fasta
    Posted date:  Jul 14, 2015  1:42 PM
  Number of letters in database: 30,654,468
  Number of sequences in database:  24,533



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5