BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: SS_all_quivered_hq.fasta 42,166 sequences; 76,657,983 total letters Query= Dcitr00g12350.1.1 Length=625 Score E Sequences producing significant alignments: (Bits) Value c118399/f4p2/1230isoform=c118399;full_length_coverage=4;non_full_... 1142 0.0 c147296/f3p3/1207isoform=c147296;full_length_coverage=3;non_full_... 1142 0.0 c81805/f2p2/1190isoform=c81805;full_length_coverage=2;non_full_le... 1081 0.0 >c118399/f4p2/1230 isoform=c118399;full_length_coverage=4;non_full_length_coverage=2;isoform_length=1230 Length=1230 Score = 1142 bits (618), Expect = 0.0 Identities = 618/618 (100%), Gaps = 0/618 (0%) Strand=Plus/Plus Query 8 ATGTTTAGGTTGACTCTGGTGCTATGTAGTGTAGGGACCTTGGTTTGGACGAAACCTTGG 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 147 ATGTTTAGGTTGACTCTGGTGCTATGTAGTGTAGGGACCTTGGTTTGGACGAAACCTTGG 206 Query 68 TACTTCAAAGAAGGTGAGTATGAACGAGAGCACATGCTACCAAAGAACCATAACTTCACG 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207 TACTTCAAAGAAGGTGAGTATGAACGAGAGCACATGCTACCAAAGAACCATAACTTCACG 266 Query 128 GACATACCACCAAGGTATTCTGGAGGAAGACGGCCCATTCACTTCGACGGCTATTTGAGA 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 267 GACATACCACCAAGGTATTCTGGAGGAAGACGGCCCATTCACTTCGACGGCTATTTGAGA 326 Query 188 GGATGGAATACCTCCTACTACTTCACTACCCGCAAGGTTTGGTTCCTGAAGCACTCTTTA 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 327 GGATGGAATACCTCCTACTACTTCACTACCCGCAAGGTTTGGTTCCTGAAGCACTCTTTA 386 Query 248 CCCCACTGGAATTTCACAAATGTCTGGGATACTCCTGTACCTACTCATTCCGGCGAAAGA 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 387 CCCCACTGGAATTTCACAAATGTCTGGGATACTCCTGTACCTACTCATTCCGGCGAAAGA 446 Query 308 TATGAAAACATCAAACAGTTGCGCCGGTTCACCGAATCGTCAGACAGACCGAGAACTCTG 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 447 TATGAAAACATCAAACAGTTGCGCCGGTTCACCGAATCGTCAGACAGACCGAGAACTCTG 506 Query 368 ATATCTTACGAGTATGACACTCTGGGAAAAATAGATTACGATGCTGCTTTAGAGCCAGAC 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 507 ATATCTTACGAGTATGACACTCTGGGAAAAATAGATTACGATGCTGCTTTAGAGCCAGAC 566 Query 428 TCATATGCCGTGAGACATGAGCAATCTCTGCACAAATATTTCAAATCCGATGGCGGCGTG 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 567 TCATATGCCGTGAGACATGAGCAATCTCTGCACAAATATTTCAAATCCGATGGCGGCGTG 626 Query 488 TATGATTCTTCACTGCAAAACAATTCGTTCTACAAGGATCCAAAGTCAGAGGACTTCGGA 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 627 TATGATTCTTCACTGCAAAACAATTCGTTCTACAAGGATCCAAAGTCAGAGGACTTCGGA 686 Query 548 ACGGCGGATTACTTGACCAAAATCTACACACAGCAAGATCCTCGCGAGAAATTTGGTACT 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 687 ACGGCGGATTACTTGACCAAAATCTACACACAGCAAGATCCTCGCGAGAAATTTGGTACT 746 Query 608 TTGTGGGACTTTGACTGA 625 |||||||||||||||||| Sbjct 747 TTGTGGGACTTTGACTGA 764 >c147296/f3p3/1207 isoform=c147296;full_length_coverage=3;non_full_length_coverage=3;isoform_length=1207 Length=1207 Score = 1142 bits (618), Expect = 0.0 Identities = 618/618 (100%), Gaps = 0/618 (0%) Strand=Plus/Plus Query 8 ATGTTTAGGTTGACTCTGGTGCTATGTAGTGTAGGGACCTTGGTTTGGACGAAACCTTGG 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 146 ATGTTTAGGTTGACTCTGGTGCTATGTAGTGTAGGGACCTTGGTTTGGACGAAACCTTGG 205 Query 68 TACTTCAAAGAAGGTGAGTATGAACGAGAGCACATGCTACCAAAGAACCATAACTTCACG 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 206 TACTTCAAAGAAGGTGAGTATGAACGAGAGCACATGCTACCAAAGAACCATAACTTCACG 265 Query 128 GACATACCACCAAGGTATTCTGGAGGAAGACGGCCCATTCACTTCGACGGCTATTTGAGA 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 266 GACATACCACCAAGGTATTCTGGAGGAAGACGGCCCATTCACTTCGACGGCTATTTGAGA 325 Query 188 GGATGGAATACCTCCTACTACTTCACTACCCGCAAGGTTTGGTTCCTGAAGCACTCTTTA 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 326 GGATGGAATACCTCCTACTACTTCACTACCCGCAAGGTTTGGTTCCTGAAGCACTCTTTA 385 Query 248 CCCCACTGGAATTTCACAAATGTCTGGGATACTCCTGTACCTACTCATTCCGGCGAAAGA 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 386 CCCCACTGGAATTTCACAAATGTCTGGGATACTCCTGTACCTACTCATTCCGGCGAAAGA 445 Query 308 TATGAAAACATCAAACAGTTGCGCCGGTTCACCGAATCGTCAGACAGACCGAGAACTCTG 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 446 TATGAAAACATCAAACAGTTGCGCCGGTTCACCGAATCGTCAGACAGACCGAGAACTCTG 505 Query 368 ATATCTTACGAGTATGACACTCTGGGAAAAATAGATTACGATGCTGCTTTAGAGCCAGAC 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 506 ATATCTTACGAGTATGACACTCTGGGAAAAATAGATTACGATGCTGCTTTAGAGCCAGAC 565 Query 428 TCATATGCCGTGAGACATGAGCAATCTCTGCACAAATATTTCAAATCCGATGGCGGCGTG 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 566 TCATATGCCGTGAGACATGAGCAATCTCTGCACAAATATTTCAAATCCGATGGCGGCGTG 625 Query 488 TATGATTCTTCACTGCAAAACAATTCGTTCTACAAGGATCCAAAGTCAGAGGACTTCGGA 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 626 TATGATTCTTCACTGCAAAACAATTCGTTCTACAAGGATCCAAAGTCAGAGGACTTCGGA 685 Query 548 ACGGCGGATTACTTGACCAAAATCTACACACAGCAAGATCCTCGCGAGAAATTTGGTACT 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 686 ACGGCGGATTACTTGACCAAAATCTACACACAGCAAGATCCTCGCGAGAAATTTGGTACT 745 Query 608 TTGTGGGACTTTGACTGA 625 |||||||||||||||||| Sbjct 746 TTGTGGGACTTTGACTGA 763 >c81805/f2p2/1190 isoform=c81805;full_length_coverage=2;non_full_length_coverage=2;isoform_length=1190 Length=1190 Score = 1081 bits (585), Expect = 0.0 Identities = 618/631 (98%), Gaps = 13/631 (2%) Strand=Plus/Plus Query 8 ATGTTTAGGTTGACTCTGGTGCTATGTAGTGTAGGGACCTTGGTTTGGACGAAACCTTGG 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 105 ATGTTTAGGTTGACTCTGGTGCTATGTAGTGTAGGGACCTTGGTTTGGACGAAACCTTGG 164 Query 68 TACTTCAAAGA-------------AGGTGAGTATGAACGAGAGCACATGCTACCAAAGAA 114 ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 165 TACTTCAAAGAAGATTTTGGTTTCAGGTGAGTATGAACGAGAGCACATGCTACCAAAGAA 224 Query 115 CCATAACTTCACGGACATACCACCAAGGTATTCTGGAGGAAGACGGCCCATTCACTTCGA 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 225 CCATAACTTCACGGACATACCACCAAGGTATTCTGGAGGAAGACGGCCCATTCACTTCGA 284 Query 175 CGGCTATTTGAGAGGATGGAATACCTCCTACTACTTCACTACCCGCAAGGTTTGGTTCCT 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 285 CGGCTATTTGAGAGGATGGAATACCTCCTACTACTTCACTACCCGCAAGGTTTGGTTCCT 344 Query 235 GAAGCACTCTTTACCCCACTGGAATTTCACAAATGTCTGGGATACTCCTGTACCTACTCA 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 345 GAAGCACTCTTTACCCCACTGGAATTTCACAAATGTCTGGGATACTCCTGTACCTACTCA 404 Query 295 TTCCGGCGAAAGATATGAAAACATCAAACAGTTGCGCCGGTTCACCGAATCGTCAGACAG 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 405 TTCCGGCGAAAGATATGAAAACATCAAACAGTTGCGCCGGTTCACCGAATCGTCAGACAG 464 Query 355 ACCGAGAACTCTGATATCTTACGAGTATGACACTCTGGGAAAAATAGATTACGATGCTGC 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 465 ACCGAGAACTCTGATATCTTACGAGTATGACACTCTGGGAAAAATAGATTACGATGCTGC 524 Query 415 TTTAGAGCCAGACTCATATGCCGTGAGACATGAGCAATCTCTGCACAAATATTTCAAATC 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 525 TTTAGAGCCAGACTCATATGCCGTGAGACATGAGCAATCTCTGCACAAATATTTCAAATC 584 Query 475 CGATGGCGGCGTGTATGATTCTTCACTGCAAAACAATTCGTTCTACAAGGATCCAAAGTC 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 585 CGATGGCGGCGTGTATGATTCTTCACTGCAAAACAATTCGTTCTACAAGGATCCAAAGTC 644 Query 535 AGAGGACTTCGGAACGGCGGATTACTTGACCAAAATCTACACACAGCAAGATCCTCGCGA 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 645 AGAGGACTTCGGAACGGCGGATTACTTGACCAAAATCTACACACAGCAAGATCCTCGCGA 704 Query 595 GAAATTTGGTACTTTGTGGGACTTTGACTGA 625 ||||||||||||||||||||||||||||||| Sbjct 705 GAAATTTGGTACTTTGTGGGACTTTGACTGA 735 Lambda K H 1.34 0.623 1.13 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45362299800 Database: SS_all_quivered_hq.fasta Posted date: Feb 25, 2019 4:32 PM Number of letters in database: 76,657,983 Number of sequences in database: 42,166 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5