BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: SS_all_quivered_hq.fasta 42,166 sequences; 76,657,983 total letters Query= Dcitr03g19820.1.1 Length=245 Score E Sequences producing significant alignments: (Bits) Value c139291/f82p4/458isoform=c139291;full_length_coverage=82;non_full... 433 6e-121 c51356/f7p2/445isoform=c51356;full_length_coverage=7;non_full_len... 433 6e-121 c78957/f29p5/443isoform=c78957;full_length_coverage=29;non_full_l... 420 5e-117 c86463/f22p0/203isoform=c86463;full_length_coverage=22;non_full_l... 132 3e-30 >c139291/f82p4/458 isoform=c139291;full_length_coverage=82;non_full_length_coverage=4;isoform_length=458 Length=458 Score = 433 bits (234), Expect = 6e-121 Identities = 234/234 (100%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 12 ATGTCCATCCTTAGAATCTGCCTGGTTATTGCCTTCGCTATCCTGAGTGTTGCTGCTCTC 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 80 ATGTCCATCCTTAGAATCTGCCTGGTTATTGCCTTCGCTATCCTGAGTGTTGCTGCTCTC 139 Query 72 CCAGAAGACTACCCAAAAGCCAGTTACCCACAAGGATACCAACAAAGTAGCTACGACACA 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140 CCAGAAGACTACCCAAAAGCCAGTTACCCACAAGGATACCAACAAAGTAGCTACGACACA 199 Query 132 ACCACTGGCAAATACCCTGCACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 200 ACCACTGGCAAATACCCTGCACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 259 Query 192 TACCCACAAGCCTACTCACCAAGCGGTTACGAGACCACCACTGGCAAATACTAA 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 260 TACCCACAAGCCTACTCACCAAGCGGTTACGAGACCACCACTGGCAAATACTAA 313 Score = 69.4 bits (37), Expect = 2e-11 Identities = 39/40 (98%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 152 ACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 191 || ||||||||||||||||||||||||||||||||||||| Sbjct 181 ACAAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 220 Score = 69.4 bits (37), Expect = 2e-11 Identities = 39/40 (98%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 113 ACAAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 152 || ||||||||||||||||||||||||||||||||||||| Sbjct 220 ACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 259 >c51356/f7p2/445 isoform=c51356;full_length_coverage=7;non_full_length_coverage=2;isoform_length=445 Length=445 Score = 433 bits (234), Expect = 6e-121 Identities = 234/234 (100%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 12 ATGTCCATCCTTAGAATCTGCCTGGTTATTGCCTTCGCTATCCTGAGTGTTGCTGCTCTC 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 80 ATGTCCATCCTTAGAATCTGCCTGGTTATTGCCTTCGCTATCCTGAGTGTTGCTGCTCTC 139 Query 72 CCAGAAGACTACCCAAAAGCCAGTTACCCACAAGGATACCAACAAAGTAGCTACGACACA 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140 CCAGAAGACTACCCAAAAGCCAGTTACCCACAAGGATACCAACAAAGTAGCTACGACACA 199 Query 132 ACCACTGGCAAATACCCTGCACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 200 ACCACTGGCAAATACCCTGCACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 259 Query 192 TACCCACAAGCCTACTCACCAAGCGGTTACGAGACCACCACTGGCAAATACTAA 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 260 TACCCACAAGCCTACTCACCAAGCGGTTACGAGACCACCACTGGCAAATACTAA 313 Score = 69.4 bits (37), Expect = 2e-11 Identities = 39/40 (98%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 152 ACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 191 || ||||||||||||||||||||||||||||||||||||| Sbjct 181 ACAAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 220 Score = 69.4 bits (37), Expect = 2e-11 Identities = 39/40 (98%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 113 ACAAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 152 || ||||||||||||||||||||||||||||||||||||| Sbjct 220 ACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 259 >c78957/f29p5/443 isoform=c78957;full_length_coverage=29;non_full_length_coverage=5;isoform_length=443 Length=443 Score = 420 bits (227), Expect = 5e-117 Identities = 232/234 (99%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 12 ATGTCCATCCTTAGAATCTGCCTGGTTATTGCCTTCGCTATCCTGAGTGTTGCTGCTCTC 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 80 ATGTCCATCCTTAGAATCTGCCTGGTTATTGCCTTCGCTATCCTGAGTGTTGCTGCTCTC 139 Query 72 CCAGAAGACTACCCAAAAGCCAGTTACCCACAAGGATACCAACAAAGTAGCTACGACACA 131 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 140 CCAGAAGACTACCCAAAAGCCAGTTACCCACAAGGATACCAACAAAGT-GCTACGAAACA 198 Query 132 ACCACTGGCAAATACCCTGCACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 199 ACCACTGGCAAATACCCTGCACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 258 Query 192 TACCCACAAGCCTACTCACCAAGCGGTTACGAGACCACCACTGGCAAATACTAA 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 259 TACCCACAAGCCTACTCACCAAGCGGTTACGAGACCACCACTGGCAAATACTAA 312 Score = 69.4 bits (37), Expect = 2e-11 Identities = 39/40 (98%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 113 ACAAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 152 || ||||||||||||||||||||||||||||||||||||| Sbjct 219 ACCAAGTAGCTACGACACAACCACTGGCAAATACCCTGCA 258 >c86463/f22p0/203 isoform=c86463;full_length_coverage=22;non_full_length_coverage=0;isoform_length=203 Length=203 Score = 132 bits (71), Expect = 3e-30 Identities = 71/71 (100%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 175 CTGGCAAATACCCTGCATACCCACAAGCCTACTCACCAAGCGGTTACGAGACCACCACTG 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTGGCAAATACCCTGCATACCCACAAGCCTACTCACCAAGCGGTTACGAGACCACCACTG 60 Query 235 GCAAATACTAA 245 ||||||||||| Sbjct 61 GCAAATACTAA 71 Lambda K H 1.35 0.625 1.14 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16717765779 Database: SS_all_quivered_hq.fasta Posted date: Feb 25, 2019 4:32 PM Number of letters in database: 76,657,983 Number of sequences in database: 42,166 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5