TBLASTN 2.11.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cclementina_182_v1.0.cds_primaryTranscriptOnly_annot.fasta 24,533 sequences; 30,654,468 total letters Query= orange1.1g012185m:1-469 Length=469 Score E Sequences producing significant alignments: (Bits) Value Ciclev10030996msucrose transporter 2, similar to AT2G02860.1 871 0.0 Ciclev10000941msucrose transporter 4, similar to AT1G09960.1 275 2e-87 Ciclev10000828msucrose-proton symporter 2, similar to AT1G22710.1 271 2e-85 >Ciclev10030996m sucrose transporter 2, similar to AT2G02860.1 Length=1821 Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/450 (99%), Positives = 446/450 (99%), Gaps = 0/450 (0%) Frame = +1 Query 20 FCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQ 79 F IGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQ Sbjct 469 FSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQ 648 Query 80 RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 139 RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL Sbjct 649 RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 828 Query 140 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHE 199 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHE Sbjct 829 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHE 1008 Query 200 SDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFL 259 DANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFL Sbjct 1009 RDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFL 1188 Query 260 FDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAfglllnsvvlgvssflIEPMCRWIGSR 319 FDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR Sbjct 1189 FDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 1368 Query 320 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 379 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT Sbjct 1369 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 1548 Query 380 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLAS 439 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLAS Sbjct 1549 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLAS 1728 Query 440 LSALAGGVVATLKLPHLSSNSFRSSGFHFG 469 LSALAGGVVATLKLPHLSSNSFRSSGFHFG Sbjct 1729 LSALAGGVVATLKLPHLSSNSFRSSGFHFG 1818 >Ciclev10000941m sucrose transporter 4, similar to AT1G09960.1 Length=1488 Score = 275 bits (704), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 186/441 (42%), Positives = 253/441 (57%), Gaps = 72/441 (16%) Frame = +1 Query 24 IGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSA 83 IG++LGD + R RA VFV GFW+LD+ANN QGP RALLADL+G Sbjct 370 IGWLLGDRGDF-------RPRAIAVFVFGFWILDVANNMTQGPCRALLADLTGMR----- 513 Query 84 NAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 143 F + AVGNILG++ G+ W + PF + AC C NLK+AF + V+F+ + + Sbjct 514 ---FKFYKAVGNILGYATGSFSGWFKILPFTLTSACNVDCANLKSAFFLDVIFIVITTCI 684 Query 144 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDAN 203 + A EVPL SAP E GHE ++ Sbjct 685 STSAAHEVPLGSRD-----QSAPF--------------------------SEEGHEQSSD 771 Query 204 LKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTD 263 + A L L + R+ + ++LIV ALTWL WFPF LFDTD Sbjct 772 VHE-----------------AFLWELFGTFRYFSGTIWIILIVTALTWLGWFPFLLFDTD 900 Query 264 WMGREVYHGDPKGNDHEVKFYDQGVREGAfglllnsvvlgvssflIEPMCRWIGSRLVWA 323 WMGRE+Y G+P +E + Y GVR GA GL+LNSVVLG++S L+E +CR G+ +W Sbjct 901 WMGREIYGGEP----NEGQNYATGVRMGALGLMLNSVVLGITSVLMEKLCRKWGAGFIWG 1068 Query 324 ISNFIVFACMATTAIISVISVR-EYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSV 382 ISN ++ C I+ +++ +Y G H + N I +A+L++FT+LG PLAITYSV Sbjct 1069 ISNILMALCFLAMLILYYVAIHMDYRG---HDLPPN-GIVIAALIIFTILGGPLAITYSV 1236 Query 383 PFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSA 442 P+A+ + T G GQGL++GVLNLAIVIPQ++VS+G+GPWD LFGGGN PAF + +SA Sbjct 1237 PYALVSIRTESLGLGQGLSLGVLNLAIVIPQIVVSMGSGPWDQLFGGGNSPAFAVGGISA 1416 Query 443 LAGGVVATLKLPHLSSNSFRS 463 LAGG++A L +P S+ R+ Sbjct 1417 LAGGLIAILAIPRSSAQKPRA 1479 >Ciclev10000828m sucrose-proton symporter 2, similar to AT1G22710.1 Length=1596 Score = 271 bits (694), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 171/444 (39%), Positives = 251/444 (57%), Gaps = 66/444 (15%) Frame = +1 Query 24 IGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNS- 82 IG+ GD+ K TRA +FVIGFW+LD+ANNT+QGP RALLADLSG R + Sbjct 379 IGHAAGDSVTDSVK-----TRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTR 543 Query 83 -ANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 141 AN+ F +MAVGN+LG++AG+ + PF S+AC C NLK F +++ L Sbjct 544 TANSFFSFFMAVGNVLGYAAGSYTHLYHMLPFTKSKACDVYCANLKTCFFLSIALLITLT 723 Query 142 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESD 201 V +++ E L + +DD N NK Sbjct 724 TVALFYVTE--------KRLEE----IDD-------------------NENK-------- 786 Query 202 ANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFD 261 + A T F + +L+ L M ++L V AL W++WFPF LFD Sbjct 787 -------ETALSTKEPFFS-------EIFGALKGLQKPMWILLAVTALNWIAWFPFLLFD 924 Query 262 TDWMGREVYHGDPKGNDHEVKFYDQGVREGAfglllnsvvlgvssflIEPMCRWIGS-RL 320 TDWMGREVY G KG+ E++ Y+ GVR G+ GL+LN++VLG +S +E + + IG + Sbjct 925 TDWMGREVYGGSSKGSAEELRVYNNGVRAGSLGLMLNAIVLGFTSLGVEVLAKLIGGVKR 1104 Query 321 VWAISNFIVFACMATTAIISVISVREY-----SGGIEHGIGANQAIKVASLVVFTLLGFP 375 +W + NF++ + T +I+ ++ +GG H + +KV +L +FT+LG P Sbjct 1105 LWGVVNFLLAVSLVFTFLITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIP 1284 Query 376 LAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAF 435 AIT+SVPFA+ + + S GQGL++GVLNLAIV+PQM+VSL +GP+DA+ GGGN+PAF Sbjct 1285 QAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAF 1464 Query 436 VLASLSALAGGVVATLKLPHLSSN 459 ++ +++A G+VA LP +++ Sbjct 1465 MVGAVAAALSGIVALTLLPSTTAD 1536 Lambda K H a alpha 0.324 0.138 0.436 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 2831694930 Database: Cclementina_182_v1.0.cds_primaryTranscriptOnly_annot.fasta Posted date: Jul 14, 2015 1:42 PM Number of letters in database: 30,654,468 Number of sequences in database: 24,533 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40