BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitr_OGSv2.0_cds.fa
           25,292 sequences; 34,155,564 total letters



Query= Dcitr03g19820.1.1

Length=1742
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcitrC024730.1.1Unknown protein. AED 0.99                             634     0.0  
DcitrC024715.1.1Unknown protein. AED 0.44                             89.8    5e-17


>DcitrC024730.1.1 Unknown protein. AED 0.99
Length=939

 Score = 634 bits (343),  Expect = 0.0
 Identities = 351/355 (99%), Gaps = 0/355 (0%)
 Strand=Plus/Plus

Query  349  CCATCCTAGGTAAAGGAATAAAATTTATAACAGGAAATCTTGACAGTGACGATGCTGAAA  408
            ||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  461  CCACCGTACGTAAAGGAATAAAATTTATAACAGGAAATCTTGACAGTGACGATGCTGAAA  520

Query  409  AATTCAACGAAATTATTAAAGATGCCCGTAAAGATCAGGATAGACTTCAGAAGCAGTCTG  468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  521  AATTCAACGAAATTATTAAAGATGCCCGTAAAGATCAGGATAGACTTCAGAAGCAGTCTG  580

Query  469  AATTACAGTATTCCTTTAGCAAGATAACCTCTGAAAAGTATGATAATCTTACCCAACAGC  528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  581  AATTACAGTATTCCTTTAGCAAGATAACCTCTGAAAAGTATGATAATCTTACCCAACAGC  640

Query  529  TTATCAGTAATGAACAAGCTCTGGCGAAAAAGATAAATCAAATCATAATCTCCAAAAACG  588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  641  TTATCAGTAATGAACAAGCTCTGGCGAAAAAGATAAATCAAATCATAATCTCCAAAAACG  700

Query  589  ATAACTACAACACCGTGATAGAAATAGAACTCGGACAGTTGATATTATTGCATGAACATG  648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  701  ATAACTACAACACCGTGATAGAAATAGAACTCGGACAGTTGATATTATTGCATGAACATG  760

Query  649  TATTCCGAGCCCTCGAAAAACTCGAAACCATGGTTGCTTATTGTGCAATGGGTAA  703
            ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  761  TATTCCGAGCCCTCGAAAAACTCGAAACCATGGTTGCTTATTGTGCAATGGCTAA  815


>DcitrC024715.1.1 Unknown protein. AED 0.44
Length=192

 Score = 89.8 bits (48),  Expect = 5e-17
 Identities = 48/48 (100%), Gaps = 0/48 (0%)
 Strand=Plus/Minus

Query  307  TCCTAGATTTTCACTCAAGACGTAATAAACGTTCACTTCTACCCATCC  354
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  93   TCCTAGATTTTCACTCAAGACGTAATAAACGTTCACTTCTACCCATCC  46



Lambda      K        H
    1.33    0.622     1.13 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 57482519952


  Database: Dcitr_OGSv2.0_cds.fa
    Posted date:  Mar 4, 2018 10:37 PM
  Number of letters in database: 34,155,564
  Number of sequences in database:  25,292



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5