BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: SS_all_quivered_hq.fasta 42,166 sequences; 76,657,983 total letters Query= 124 Length=1122 Score E Sequences producing significant alignments: (Bits) Value c353738/f62p83/2661isoform=c353738;full_length_coverage=62;non_fu... 2006 0.0 c305470/f2p83/2313isoform=c305470;full_length_coverage=2;non_full... 1544 0.0 c23566/f4p40/339isoform=c23566;full_length_coverage=4;non_full_le... 551 8e-156 c183065/f2p46/1649isoform=c183065;full_length_coverage=2;non_full... 228 2e-58 c173260/f10p19/2417isoform=c173260;full_length_coverage=10;non_fu... 117 4e-25 c176794/f2p19/2187isoform=c176794;full_length_coverage=2;non_full... 117 4e-25 >c353738/f62p83/2661 isoform=c353738;full_length_coverage=62;non_full_length_coverage=83;isoform_length=2661 Length=2661 Score = 2006 bits (1086), Expect = 0.0 Identities = 1110/1122 (99%), Gaps = 0/1122 (0%) Strand=Plus/Plus Query 1 ATGTGGATTCTCAGATCTTCATTGGTGGGCTTAGCCCTACTGGTGACGGTAGCACTGTGT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 86 ATGTGGATTCTCAGATCTTCATTGGTGGGCTTAGCCCTACTGGTGACGGTAGCACTGTGT 145 Query 61 GTGCCACTGCCCACCCCTGTTCCAAACAAAGAGACAGCTGTCACCGAAGTAGCCAAAGCT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 146 GTGCCACTGCCCACCCCTGTTCCAAACAAAGAGACAGCTGTCACCGAAGTAGCCAAAGCT 205 Query 121 GTTACAGATGTGGCCAAACCCGATGATGCGGTCCGGAGGAAAAAGAGTCTTGATGAGAGC 180 || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 206 GTAACAGATGTAGCCAAACCCGATGATGCGGTGCGGAGGAAAAAGAGTCTTGATGAGAGC 265 Query 181 TTTGGTTTTGAGGATAGATCAGGTTGGGAAGATAACTACGAAGTTCATCATCACCATGTA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 266 TTTGGTTTTGAGGATAGATCAGGTTGGGAAGATAACTACGAAGTTCATCATCACCATGTA 325 Query 241 GAACATCACCAGCCTAAAGGCTACTGGAAGAAGAAGCTAGTCTGGAAAGAAGCCTGGGAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 326 GAACATCACCAGCCTAAAGGCTACTGGAAGAAGAAGCTAGTCTGGAAAGAAGCCTGGGAA 385 Query 301 AAGGTGTGGAAAATTGAGAAGAAAGAAATCTGGAAGCCAGTGTGGAAGAAAATCCAAGTC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 386 AAGGTGTGGAAAATTGAGAAGAAAGAAATCTGGAAGCCAGTGTGGAAGAAAATCCAAGTC 445 Query 361 CCTATATGGAAACACGTCCAGGTCCCTATCTGGAAAGAAATCCAAGTCCCTGACTGGAAA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 446 CCTATATGGAAACACGTCCAGGTCCCTATCTGGAAAGAAATCCAAGTCCCTGACTGGAAA 505 Query 421 ATAGTGAAGAAACCAATCTGGAAGGAAATTCAAGTACCCGACTGGAAGGTCATTCAGAAA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 506 ATAGTGAAGAAACCAATCTGGAAGGAAATTCAAGTACCCGACTGGAAGGTCATTCAGAAA 565 Query 481 CCCATCTGGAAGGAAGTGCAAGTCCCAGCATGGAAGGAAATCCAAGTGCCAGAATGGAAG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 566 CCCATCTGGAAGGAAGTGCAAGTCCCAGCATGGAAGGAAATCCAAGTGCCAGAATGGAAG 625 Query 541 AAGGTGGCCAAACCAGTATGGAAGGAGATCCAGGTCCCTGCATGGAAAGAAATCAAGGTG 600 ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 626 AAGGTAGCCAAACCAGTGTGGAAGGAGATTCAGGTCCCTGCATGGAAAGAAATCAAGGTA 685 Query 601 CCAGACTGGAAGAAAGTATGGGTACCCAAGATAGTGAAGGAGAGAGTACCAGGAGAGAAA 660 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 686 CCAGACTGGAAGAAAGTATGGGTACCCAAGATAGTGAAGGAGAGAGTACCAGGGGAGAAA 745 Query 661 CATGTCGGTAAGGACGAACATGGCTGGGAATACACCTCACATGATCTATGGAGGAAGAAG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 746 CATGTCGGTAAGGACGAACATGGCTGGGAATACACCTCACATGATCTATGGAGGAAGAAG 805 Query 721 ATGATCTGGGAACCCAAGTGGGAGAAGATCTGGAGAACCGAGAAGAAACAAATCTGGATC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 806 ATGATCTGGGAACCCAAGTGGGAGAAGATCTGGAGAACCGAGAAGAAACAAATCTGGATC 865 Query 781 CCAGAGAAGAAATTGGAATGGCACGACGAATGGAAGCAAATCTGGCGAACAGAGAAGAAA 840 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 866 CCAGAGAAGAAATTGGAATGGCACGACGAATGGAAGCAAATCTGGCGAACAGAAAAGAAA 925 Query 841 CAGATCTGGATTACCAAGAAGAAGGAAGAGTGGGTCGAGGAGAAAGTACAAATCTGGAGA 900 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 926 CAGATCTGGATAACCAAGAAGAAGGAAGAGTGGGTCGAGGAGAAAGTACAAATCTGGAGA 985 Query 901 ACTGAGAAGAAAGAGGAGTGGATAGAAGAGAAGATTCAGATCTGGAGGGTAGAGAAGAAA 960 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 986 ACTGAGAAGAAAGAGGAGTGGATAGAAGAGAAGATTCAAATCTGGAGGGTAGAGAAGAAA 1045 Query 961 CAAGAATGGGTGACTGAGAAGAAACTGGCGTGGAAAGAAGAATGGAAAGAGTCCAAGGTA 1020 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1046 CAAGAATGGGTGACTGAAAAGAAACTGGCGTGGAAAGAAGAATGGAAAGAGTCCAAGGTA 1105 Query 1021 CAAGCATGGCAAGAAGTGAAGGTACCAGCATGGAAGAAGATCTGGAAACCAGTGTGGGAG 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1106 CAAGCATGGCAAGAAGTGAAGGTACCAGCATGGAAGAAGATCTGGAAACCAGTGTGGGAG 1165 Query 1081 AAGGTGTGGGTACCCGTACATGAACATCATGGCTGGGACTGA 1122 |||||||||||||||||||||||||||||||||||||||||| Sbjct 1166 AAGGTGTGGGTACCCGTACATGAACATCATGGCTGGGACTGA 1207 >c305470/f2p83/2313 isoform=c305470;full_length_coverage=2;non_full_length_coverage=83;isoform_length=2313 Length=2313 Score = 1544 bits (836), Expect = 0.0 Identities = 854/863 (99%), Gaps = 0/863 (0%) Strand=Plus/Plus Query 260 GCTACTGGAAGAAGAAGCTAGTCTGGAAAGAAGCCTGGGAAAAGGTGTGGAAAATTGAGA 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCTACTGGAAGAAGAAGCTAGTCTGGAAAGAAGCCTGGGAAAAGGTGTGGAAAATTGAGA 60 Query 320 AGAAAGAAATCTGGAAGCCAGTGTGGAAGAAAATCCAAGTCCCTATATGGAAACACGTCC 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGAAAGAAATCTGGAAGCCAGTGTGGAAGAAAATCCAAGTCCCTATATGGAAACACGTCC 120 Query 380 AGGTCCCTATCTGGAAAGAAATCCAAGTCCCTGACTGGAAAATAGTGAAGAAACCAATCT 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGGTCCCTATCTGGAAAGAAATCCAAGTCCCTGACTGGAAAATAGTGAAGAAACCAATCT 180 Query 440 GGAAGGAAATTCAAGTACCCGACTGGAAGGTCATTCAGAAACCCATCTGGAAGGAAGTGC 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGAAGGAAATTCAAGTACCCGACTGGAAGGTCATTCAGAAACCCATCTGGAAGGAAGTGC 240 Query 500 AAGTCCCAGCATGGAAGGAAATCCAAGTGCCAGAATGGAAGAAGGTGGCCAAACCAGTAT 559 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 241 AAGTCCCAGCATGGAAGGAAATCCAAGTGCCAGAATGGAAGAAGGTAGCCAAACCAGTGT 300 Query 560 GGAAGGAGATCCAGGTCCCTGCATGGAAAGAAATCAAGGTGCCAGACTGGAAGAAAGTAT 619 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 301 GGAAGGAGATTCAGGTCCCTGCATGGAAAGAAATCAAGGTACCAGACTGGAAGAAAGTAT 360 Query 620 GGGTACCCAAGATAGTGAAGGAGAGAGTACCAGGAGAGAAACATGTCGGTAAGGACGAAC 679 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 361 GGGTACCCAAGATAGTGAAGGAGAGAGTACCAGGGGAGAAACATGTCGGTAAGGACGAAC 420 Query 680 ATGGCTGGGAATACACCTCACATGATCTATGGAGGAAGAAGATGATCTGGGAACCCAAGT 739 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 ATGGCTGGGAATACACCTCACATGATCTATGGAGGAAGAAGATGATCTGGGAACCCAAGT 480 Query 740 GGGAGAAGATCTGGAGAACCGAGAAGAAACAAATCTGGATCCCAGAGAAGAAATTGGAAT 799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GGGAGAAGATCTGGAGAACCGAGAAGAAACAAATCTGGATCCCAGAGAAGAAATTGGAAT 540 Query 800 GGCACGACGAATGGAAGCAAATCTGGCGAACAGAGAAGAAACAGATCTGGATTACCAAGA 859 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 541 GGCACGACGAATGGAAGCAAATCTGGCGAACAGAAAAGAAACAGATCTGGATAACCAAGA 600 Query 860 AGAAGGAAGAGTGGGTCGAGGAGAAAGTACAAATCTGGAGAACTGAGAAGAAAGAGGAGT 919 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AGAAGGAAGAGTGGGTCGAGGAGAAAGTACAAATCTGGAGAACTGAGAAGAAAGAGGAGT 660 Query 920 GGATAGAAGAGAAGATTCAGATCTGGAGGGTAGAGAAGAAACAAGAATGGGTGACTGAGA 979 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 661 GGATAGAAGAGAAGATTCAAATCTGGAGGGTAGAGAAGAAACAAGAATGGGTGACTGAAA 720 Query 980 AGAAACTGGCGTGGAAAGAAGAATGGAAAGAGTCCAAGGTACAAGCATGGCAAGAAGTGA 1039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 AGAAACTGGCGTGGAAAGAAGAATGGAAAGAGTCCAAGGTACAAGCATGGCAAGAAGTGA 780 Query 1040 AGGTACCAGCATGGAAGAAGATCTGGAAACCAGTGTGGGAGAAGGTGTGGGTACCCGTAC 1099 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 AGGTACCAGCATGGAAGAAGATCTGGAAACCAGTGTGGGAGAAGGTGTGGGTACCCGTAC 840 Query 1100 ATGAACATCATGGCTGGGACTGA 1122 ||||||||||||||||||||||| Sbjct 841 ATGAACATCATGGCTGGGACTGA 863 >c23566/f4p40/339 isoform=c23566;full_length_coverage=4;non_full_length_coverage=40;isoform_length=339 Length=339 Score = 551 bits (298), Expect = 8e-156 Identities = 304/307 (99%), Gaps = 0/307 (0%) Strand=Plus/Plus Query 1 ATGTGGATTCTCAGATCTTCATTGGTGGGCTTAGCCCTACTGGTGACGGTAGCACTGTGT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33 ATGTGGATTCTCAGATCTTCATTGGTGGGCTTAGCCCTACTGGTGACGGTAGCACTGTGT 92 Query 61 GTGCCACTGCCCACCCCTGTTCCAAACAAAGAGACAGCTGTCACCGAAGTAGCCAAAGCT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 93 GTGCCACTGCCCACCCCTGTTCCAAACAAAGAGACAGCTGTCACCGAAGTAGCCAAAGCT 152 Query 121 GTTACAGATGTGGCCAAACCCGATGATGCGGTCCGGAGGAAAAAGAGTCTTGATGAGAGC 180 || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 153 GTAACAGATGTAGCCAAACCCGATGATGCGGTGCGGAGGAAAAAGAGTCTTGATGAGAGC 212 Query 181 TTTGGTTTTGAGGATAGATCAGGTTGGGAAGATAACTACGAAGTTCATCATCACCATGTA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213 TTTGGTTTTGAGGATAGATCAGGTTGGGAAGATAACTACGAAGTTCATCATCACCATGTA 272 Query 241 GAACATCACCAGCCTAAAGGCTACTGGAAGAAGAAGCTAGTCTGGAAAGAAGCCTGGGAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 273 GAACATCACCAGCCTAAAGGCTACTGGAAGAAGAAGCTAGTCTGGAAAGAAGCCTGGGAA 332 Query 301 AAGGTGT 307 ||||||| Sbjct 333 AAGGTGT 339 >c183065/f2p46/1649 isoform=c183065;full_length_coverage=2;non_full_length_coverage=46;isoform_length=1649 Length=1649 Score = 228 bits (123), Expect = 2e-58 Identities = 128/130 (98%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 993 GAAAGAAGAATGGAAAGAGTCCAAGGTACAAGCATGGCAAGAAGTGAAGGTACCAGCATG 1052 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 GAAAGCAGAATGG-AAGAGTCCAAGGTACAAGCATGGCAAGAAGTGAAGGTACCAGCATG 60 Query 1053 GAAGAAGATCTGGAAACCAGTGTGGGAGAAGGTGTGGGTACCCGTACATGAACATCATGG 1112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GAAGAAGATCTGGAAACCAGTGTGGGAGAAGGTGTGGGTACCCGTACATGAACATCATGG 120 Query 1113 CTGGGACTGA 1122 |||||||||| Sbjct 121 CTGGGACTGA 130 >c173260/f10p19/2417 isoform=c173260;full_length_coverage=10;non_full_length_coverage=19;isoform_length=2417 Length=2417 Score = 117 bits (63), Expect = 4e-25 Identities = 188/249 (76%), Gaps = 6/249 (2%) Strand=Plus/Plus Query 580 GCATGGAAAGAAAT-CAAGGTGCCAGACTGGAAGAAAGTATGGGTACCCAAGA-TAGTGA 637 || ||||| ||||| ||| || |||||||||||||| | ||||| ||| | |||| | Sbjct 30 GCCTGGAAGGAAATTCAA-GTACCAGACTGGAAGAAGATTTGGGT-GCCAGAACTAGTCA 87 Query 638 AGGAGAGAGTACCAGGAGAGAAACATGTCGGTAAGGACGAACATGGCTGGGAATACACCT 697 | || | || |||||| |||||| ||| ||||| | |||| ||||||||||| | Sbjct 88 AAGAATGGGTTCCAGGATGTAAACATCACGGCAAGGATCACGATGGTTGGGAATACACTT 147 Query 698 CACATGATCTATGGAGGAAGAAGATGATCTGGGAACCCA-AGTGGGAGAAGATCTGGAGA 756 | |||| || ||||| |||||| | | | |||| ||| | ||| |||||||||||||| Sbjct 148 CTCATGGACTGTGGAGAAAGAAGGTCGTAT-GGAAGCCACACTGGAAGAAGATCTGGAGA 206 Query 757 ACCGAGAAGAAACAAATCTGGATCCCAGAGAAGAAATTGGAATGGCACGACGAATGGAAG 816 || ||| |||||||||||||| | ||| |||||| ||| ||| | || |||||| | Sbjct 207 ACTGAGCAGAAACAAATCTGGGTAGAAGACAAGAAACTGGCCTGGAAAGAAGAATGGTAC 266 Query 817 CAAATCTGG 825 || |||||| Sbjct 267 CAGATCTGG 275 >c176794/f2p19/2187 isoform=c176794;full_length_coverage=2;non_full_length_coverage=19;isoform_length=2187 Length=2187 Score = 117 bits (63), Expect = 4e-25 Identities = 188/249 (76%), Gaps = 6/249 (2%) Strand=Plus/Plus Query 580 GCATGGAAAGAAAT-CAAGGTGCCAGACTGGAAGAAAGTATGGGTACCCAAGA-TAGTGA 637 || ||||| ||||| ||| || |||||||||||||| | ||||| ||| | |||| | Sbjct 55 GCCTGGAAGGAAATTCAA-GTACCAGACTGGAAGAAGATTTGGGT-GCCAGAACTAGTCA 112 Query 638 AGGAGAGAGTACCAGGAGAGAAACATGTCGGTAAGGACGAACATGGCTGGGAATACACCT 697 | || | || |||||| |||||| ||| ||||| | |||| ||||||||||| | Sbjct 113 AAGAATGGGTTCCAGGATGTAAACATCACGGCAAGGATCACGATGGTTGGGAATACACTT 172 Query 698 CACATGATCTATGGAGGAAGAAGATGATCTGGGAACCCA-AGTGGGAGAAGATCTGGAGA 756 | |||| || ||||| |||||| | | | |||| ||| | ||| |||||||||||||| Sbjct 173 CTCATGGACTGTGGAGAAAGAAGGTCGTAT-GGAAGCCACACTGGAAGAAGATCTGGAGA 231 Query 757 ACCGAGAAGAAACAAATCTGGATCCCAGAGAAGAAATTGGAATGGCACGACGAATGGAAG 816 || ||| |||||||||||||| | ||| |||||| ||| ||| | || |||||| | Sbjct 232 ACTGAGCAGAAACAAATCTGGGTAGAAGACAAGAAACTGGCCTGGAAAGAAGAATGGTAC 291 Query 817 CAAATCTGG 825 || |||||| Sbjct 292 CAGATCTGG 300 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82815587032 Database: SS_all_quivered_hq.fasta Posted date: Feb 25, 2019 4:32 PM Number of letters in database: 76,657,983 Number of sequences in database: 42,166 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5