BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitr_OGSv2.0_cds.fa
           25,292 sequences; 34,155,564 total letters



Query= 132465

Length=1000
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcitrC063805.1.1facilitated trehalose transporter Tret1-like (AHR...  84.2    1e-15


>DcitrC063805.1.1 facilitated trehalose transporter Tret1-like (AHRD V3.11 *-* 
tr|A0A1W4WVK3|A0A1W4WVK3_AGRPL). AED 0.09| InterPro:IPR005828,Pfam:PF00083| 
GO:0016021,GO:0022857,GO:0055085
Length=531

 Score = 84.2 bits (45),  Expect = 1e-15
 Identities = 64/73 (88%), Gaps = 1/73 (1%)
 Strand=Plus/Plus

Query  266  ATTTATACTGCTAGAATAGGTCTGAAGAGT-CCTTTTTTCCAGCAGTAGGCTACTGCTAT  324
            |||||||||||| | ||||| ||||| ||| |||||  ||||||||||||||||| ||||
Sbjct  442  ATTTATACTGCTCGCATAGGACTGAAAAGTCCCTTTACTCCAGCAGTAGGCTACTACTAT  501

Query  325  TATTCTGGTCAAA  337
            |||| ||||||||
Sbjct  502  TATTGTGGTCAAA  514



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 32685182400


  Database: Dcitr_OGSv2.0_cds.fa
    Posted date:  Mar 4, 2018 10:37 PM
  Number of letters in database: 34,155,564
  Number of sequences in database:  25,292



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5