BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Dcitri_transcriptome.fasta 60,261 sequences; 104,618,276 total letters Query= Dcit002278.1 Length=1062 Score E Sequences producing significant alignments: (Bits) Value DcDTi10232.2Unknown protein 1720 0.0 >DcDTi10232.2 Unknown protein Length=2631 Score = 1720 bits (931), Expect = 0.0 Identities = 1005/1037 (97%), Gaps = 20/1037 (2%) Strand=Plus/Plus Query 1 ATGTGCGTGCTTCTGCCATTTGCATCCTGTGAGCATCTCTACTTACAACTGATCAAGGAT 60 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 388 ATGTGCGTACTTCTGCCATTTGCATCCTGCGAGCATCTCTACTTACAACTGATCAAGGAT 447 Query 61 CTTTACAAATCCTTTGAGAACATCATCATG-AAAATGGATCAGTTCAAGATTATGCAATG 119 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 448 CTTTACAAATCC-TTGAGAACATCATCATGAAAAATGGATCAGTTCAAGATTATGCAATG 506 Query 120 CCGGAGAGACCTTGGAAGATACCGTGCTTACAAATACTTGCTGCATAATTTCACGGGTCC 179 ||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| || Sbjct 507 CCGGAGAGACCTTGGAAGATACCGTGCGTACAAATACTTGCTACATA--TTCACGGG-CC 563 Query 180 AATGAATAATATGTGGTTGGGTGCT-GGGGTTCCTGAACCATCTATACGAAGGATGAGAC 238 ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 564 -ATGAA-AATATGTGGTTGGGTGCTGGGGGTTCCTGAACCATCTATACGAAGGATGAGAC 621 Query 239 TTCAAACCAAAATGGTGGGTGTTGAGGGGAACGAATACTATACGAAATTTCCGCGCTTGT 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 622 TTCAAACCAAAATGGTGGGTGTTGAGGGGAACGAATACTATACGAAATTTCCGCGCTTGT 681 Query 299 ATGAATTTCGGAACGAGAATCGTCTCGTTAGAGCTTTGTACTATAGTGTCCGG-TATTGG 357 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 682 ATGAATTTCGGAACGAGAATCGTCTCGTTAGAGCTTTGTACTATAGTGTCCGGTTATTGG 741 Query 358 AATCTGCGGAGATGGAACTGCAGCGAAGCCGCCCTCCGTCACGTCAAATCCATCGCCCCC 417 |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||| Sbjct 742 AATCTGCGGAGATGGAACTGCAACGAAGCCGCCCTGCGTCACGTCAAATCCATCG-CCCC 800 Query 418 CTCATCCCGGAGGTCAACCTCACCCTCGCCTTCCCCATCTTCAACGAGTTCACCTCCGTG 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 801 CTCATCCCGGAGGTCAACCTCACCCTCGCCTTCCCCATCTTCAACGAGTTCACCTCCGTG 860 Query 478 GTCACCACACCCTACGTGCGTCCCAACCGCACCACTCTACCTTGGAAGTACGGCCTTGAG 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 861 GTCACCACACCCTACGTGCGTCCCAACCGCACCACTCTACCTTGGAAGTACGGCCTTGAG 920 Query 538 AAACTTGCCCGACGCCAGAACGCGACCAACGGCACCACAAAGTTTCCTCGCAGGAAGCTG 597 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 921 AAACTTGCCCGACGCCAGAACGCGACAAACGGCACCACAAAGTTCCCTCGCAGGAAGCTG 980 Query 598 ACAATCCACATGATGTACGGGTACTCCGGCGTGTTCCGGCAGTTTTGGAAGACAGATCCC 657 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct 981 ACACTCCACATGATGTACGGGTACTCCGGTGTGTTCCGGCAGTTTTGGAAGACAGAT-CC 1039 Query 658 CGTCTAGCCCCGCGATATGCGACCGGGGCCGAGATGCCCATCTGGGGGACGCCACCGCCC 717 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1040 CGTCTAGCCCCACGATATGCGACCGGGGCCGAGATGCCCATCTGGGGGACGCCACCGCCC 1099 Query 718 GAGTATAGTCGACTGCTGGTGACCGTAAACCCGCCCAAACAGAGAAAGTCTGGCCGGTGG 777 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1100 GAGTATAGTCGACTGCTGGTGACCGTAAACCCGCCCAAACAGAGAAAGTCTGGCCGGTGG 1159 Query 778 ACGCGCCCGAAGAACAGAACCAGACCGGTTTGGGCTACCGGGAGAAAGACTCGCAATCGG 837 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1160 ACGCGCCCGAAGAACAGAACCAGACCGGTTTGGGCTACAGGGAGAAAGACTCGCAATCGG 1219 Query 838 ACACATCCTAGAGCACGAG---------GTTCCGGGACTCTGTCTAGGACAGAGGTATCT 888 ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1220 ACACATCCTAGAGCACGAGGTTCGACTCGTTCCGGGACTCTGTCTAGGACAGAGGTATCT 1279 Query 889 TTCCGGAATGGCACGAGTGCCTTCGCGGATTTCCGGTTGGAGTCGGTCACACTCGGGTGG 948 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1280 TTCCGGAATGGCACGAGTGCCTTCGCGGATTTCCGGTTGGAGTCGGTCACACTCGGGTGG 1339 Query 949 ACTCGGCGCTACTATGGACGCCAGTGGAACTCGACTGGTATCGAACGGAGGAAATTGTTC 1008 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1340 ACTCGGCGCTACTATGGACGCCAGTGGAACTCGACTGGTATCGAACGGAGGAAATTGTTC 1399 Query 1009 AAGTGTATTCCTCAGGT 1025 ||||||||||||||||| Sbjct 1400 AAGTGTATTCCTCAGGT 1416 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 106761343640 Database: Dcitri_transcriptome.fasta Posted date: Apr 30, 2019 10:57 AM Number of letters in database: 104,618,276 Number of sequences in database: 60,261 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5