BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Candidatus_Liberibacter_asiaticus_gxpsy_proteins.fasta
           1,141 sequences; 332,037 total letters



Query= Untitled_sequence

Length=579
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|470205567|ref|YP_007599665.1|  hypothetical protein WSI_05440 ...  958     0.0  
gi|470205606|ref|YP_007599704.1|  hypothetical protein WSI_05635 ...  65.1    2e-12


>gi|470205567|ref|YP_007599665.1| hypothetical protein WSI_05440 [Candidatus Liberibacter asiaticus 
str. gxpsy]
Length=574

 Score = 958 bits (2477),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 495/579 (85%), Positives = 510/579 (88%), Gaps = 5/579 (1%)

Query  1    MDQGLVSIAVLSLFLIGCDLGAERNDIKSVQTGHNKMADNKQNITLQYLDREVRDLETLL  60
            MDQGLVSIAVLSLFLIGCDLGAERNDIKSVQTGHNKMADNKQNITLQYLDREVRDLETLL
Sbjct  1    MDQGLVSIAVLSLFLIGCDLGAERNDIKSVQTGHNKMADNKQNITLQYLDREVRDLETLL  60

Query  61   ERAKNGLIPLDEQEYIRGVKEVEIRKMMELFASDPANSGVSTKSISVRLNEIRDGLVVVW  120
            ERAKNGLIPLDEQEYIRGVKEVEIRKMMELFASDPANSGVSTKSISVRLNEI DGLVVVW
Sbjct  61   ERAKNGLIPLDEQEYIRGVKEVEIRKMMELFASDPANSGVSTKSISVRLNEIWDGLVVVW  120

Query  121  NNEVDRFNDQLVMDTTNKEARIQDSEKTLDSISRQDAWEKTSSLRRMLEEQKLLIKQVRD  180
            NNEVDRFNDQLVMDTTNKEARIQDSEKTLDSISRQDAWEKTSSLRRMLEEQKLLIKQVRD
Sbjct  121  NNEVDRFNDQLVMDTTNKEARIQDSEKTLDSISRQDAWEKTSSLRRMLEEQKLLIKQVRD  180

Query  181  KDIEKTIAEIENFIKDSEERLKNAIEARKRKDYELSHLHVERFYDKLFETNDIITTVSTR  240
            KDIEKTIAEIENFIKDSEERLKNAIEARKRKDYELSHLH+ERFY++ +  +D++   +TR
Sbjct  181  KDIEKTIAEIENFIKDSEERLKNAIEARKRKDYELSHLHIERFYNRFYMIDDLMNFANTR  240

Query  241  ILMLRGNNSLLYASINNTCNKANKLLFDAENVKSMEPSEFEYLKTSPLSQEEGTKRVNEL  300
            I  LRGN SLL  S      K NKL  D ENVK MEPSEFEYLKTSPLSQEEGTKR  EL
Sbjct  241  IWTLRGNTSLLINSKIKIIAKVNKLTGDVENVKFMEPSEFEYLKTSPLSQEEGTKRAIEL  300

Query  301  LDKAEDYLQEAIKEMDAKNHRSSKRLALKSERYRNRAIAFIDALGAHFPNTPSPPGLEAK  360
            LDKA  YLQEAIKEMDAKN+ SS RL  K+ R   RA  FI  L   FPNT   P LEAK
Sbjct  301  LDKAAGYLQEAIKEMDAKNYLSSHRLISKARRINERASNFIKFLKTRFPNTFGSPALEAK  360

Query  361  IANYGSTQRKYLEKKATSTSIPTSTSIPTSTPGSSLWDKLKKIDSSLKKAGEVVDQVDRE  420
               Y    R +L K   S+S   S  + TST     WDK+K+IDSSLKKAGEVVDQVDRE
Sbjct  361  FGIYNDVYRDFLAKMEGSSSSSGSVDVNTST-----WDKIKEIDSSLKKAGEVVDQVDRE  415

Query  421  IGLYLKYRDREVFKSTSVSQSSIDVMKQESEMVKVSLDGSIVPYKQGDSIVEGEGIGYTY  480
            IGLYLKYRDREVFKSTSVSQSSIDVMKQESEMVKVSLDGSIVPYKQGDSIVEGEGIGYTY
Sbjct  416  IGLYLKYRDREVFKSTSVSQSSIDVMKQESEMVKVSLDGSIVPYKQGDSIVEGEGIGYTY  475

Query  481  TSLAQLPSIDTGEAFNGLGGRKRRVVSSSVRVLNAQGLEVGTSFDKMYPVKGLKDEAKSG  540
            TSLAQLPSIDTGEAFNGLGGRKRRVVSSSVRVLNAQGLEVGTSFDKMYPVKGLKDEAKSG
Sbjct  476  TSLAQLPSIDTGEAFNGLGGRKRRVVSSSVRVLNAQGLEVGTSFDKMYPVKGLKDEAKSG  535

Query  541  EFNCPLGGSFTSQDGLCLRQKGANTGAITAVITHFSTGG  579
            EFNCPLGGSFTSQDGLCLRQKGANTGAITAVITHFSTGG
Sbjct  536  EFNCPLGGSFTSQDGLCLRQKGANTGAITAVITHFSTGG  574


>gi|470205606|ref|YP_007599704.1| hypothetical protein WSI_05635 [Candidatus Liberibacter asiaticus 
str. gxpsy]
Length=1347

 Score = 65.1 bits (157),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 0/122 (0%)

Query  453   VKVSLDGSIVPYKQGDSIVEGEGIGYTYTSLAQLPSIDTGEAFNGLGGRKRRVVSSSVRV  512
             ++V  D ++    + D   E E  G        +PS+DT E+FN   G+KRR+    VRV
Sbjct  1213  IEVERDATLPRLAKDDGSKEDEYEGGANERYVCIPSMDTSESFNSTMGKKRRIFKVVVRV  1272

Query  513   LNAQGLEVGTSFDKMYPVKGLKDEAKSGEFNCPLGGSFTSQDGLCLRQKGANTGAITAVI  572
             +N   LEVG     + PV+ L+ + K+GEF   +    +    + +RQK      +T++ 
Sbjct  1273  INTADLEVGILGFPIVPVEELRGKPKTGEFEVLVPSDASLNPEIIIRQKTGGYFCLTSIT  1332

Query  573   TH  574
              H
Sbjct  1333  AH  1334



Lambda      K        H        a         alpha
   0.312    0.130    0.354    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 120949000


  Database: Candidatus_Liberibacter_asiaticus_gxpsy_proteins.fasta
    Posted date:  Jul 20, 2015  1:34 PM
  Number of letters in database: 332,037
  Number of sequences in database:  1,141



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40