BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Dcitr_OGSv2.0_rna.fa 25,292 sequences; 49,157,538 total letters Query= T7- Length=1506 Score E Sequences producing significant alignments: (Bits) Value DcitrM023800.1.1Broad-complex (AHRD V3.11 *-* tr|A0A088FQM8|A0A08... 2745 0.0 DcitrM076455.1.1Broad-Complex (AHRD V3.11 *-* tr|A0A292GCW5|A0A29... 553 2e-156 DcitrM023795.1.1Broad-complex (AHRD V3.11 *-* tr|U3U9E0|U3U9E0_PS... 355 6e-97 >DcitrM023800.1.1 Broad-complex (AHRD V3.11 *-* tr|A0A088FQM8|A0A088FQM8_DIPPU). AED 0.01 Length=1863 Score = 2745 bits (1486), Expect = 0.0 Identities = 1496/1500 (99%), Gaps = 3/1500 (0%) Strand=Plus/Plus Query 7 ATTATCAAAGTAGCATCACCTCAGCTTTTGAAAATCTCAGGGACGATGAAGATTTCATAG 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 299 ATTATCAAAGTAGCATCACCTCAGCTTTTGAAAATCTCAGGGACGATGAAGATTTCATAG 358 Query 67 ATGTCACTTTAGCTTGTGACGGCAAAAGCTTGAAAGCTCATCGGGTTGTATTGTCGGCAT 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 359 ATGTCACTTTAGCTTGTGACGGCAAAAGCTTGAAAGCTCATCGGGTTGTATTGTCGGCAT 418 Query 127 GTAGTCCATATTTCAGGGAATTGTTGAAGACAACGCCTTGCAAACACCCCGTGATAGTTC 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 419 GTAGTCCATATTTCAGGGAATTGTTGAAGACAACGCCTTGCAAACACCCCGTGATAGTTC 478 Query 187 TGCAAGATGTGGTCTGGGAAGATCTTCATGCCCTTGTAGAATTCATTTACCATGGACAAG 246 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 479 TGCAAGATGTGGTCTGGGAAGATCTTCATGCCCTTGTAGAATTTATTTACCATGGACAAG 538 Query 247 TCAATGTTCATCAGAAGAATCTAACTTCGTTTCTAAAGACTGCAGAAGTGTTACGCGTAT 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 539 TCAATGTTCATCAGAAGAATCTAACTTCGTTTCTAAAGACTGCAGAAGTGTTACGCGTAT 598 Query 307 CTGGTCTTACGCAAAACAGTACAGACATTAATCGCGAAACAGGGTCTCCTTACGGTAAGG 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 CTGGTCTTACGCAAAACAGTACAGACATTAATCGCGAAACAGGGTCTCCTTACGGTAAGG 658 Query 367 TGCCAAGTGAGAAAAGTCATAGTGACAACGTCAGTGACTTATCACCCAGACCAGACACCT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 659 TGCCAAGTGAGAAAAGTCATAGTGACAACGTCAGTGACTTATCACCCAGACCAGACACCT 718 Query 427 CCAGACATTCCTCATTTAGTCATCACGTTCGCCATCGAAGTTCACCCCTACTCTCTTCTC 486 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 719 CCAGACATTCCTCATTTAG---TCACGTTCGCCATCGAAGTTCACCCCTACTCTCTTCTC 775 Query 487 CACTCAACAATAAACACCTCTCATCTCCTCTTGCTCATGAAATCCCTTCTAAACGTGCCA 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 776 CACTCAACAATAAACACCTCTCATCTCCTCTTGCTCATGAAATCCCTTCTAAACGTGCCA 835 Query 547 AAACAAATGCCACACCTGAAGATCTGTCGTCCACTTCAACCATCAATGATTCAATCGCTG 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 836 AAACAAATGCCACACCTGAAGATCTGTCGTCCACTTCAACCATCAATGATTCAATCGCTG 895 Query 607 CTAACTACATCAATAAAACCCCCACACCTACACCTCCCATTCCTGATCAAACACCTCCTG 666 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 CTAACTACATCAATAAAACCCCCACACCTACACCTCCCATTCCTGATCAAACACCTCCTG 955 Query 667 CCAAGCTTCCTAACTCCAATGCTTCCAGCAATGAAGACGAAGAAGATGATAGAGACGAGG 726 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 956 CCAAGCTTCCTAACTCCAATGCTTCCAGCAATGAAGACGAAGAAGATGATAGAGACGAGG 1015 Query 727 AAGAAAAAGTAGAGGACGAGAGAGAAGATGATTTATCGGAGGTTGAGGAGCCACCTGTAG 786 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1016 AAGAAAAAGTAGAGGACGAGAGAGAAGATGATTTATCGGAGGTTGAGGAGCCACCTGTAG 1075 Query 787 ATTTTTCTATAACCCCAAATAGAGAATCACCAGAAATCAAAAAGAAAAGGGACCGAACCC 846 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1076 ATTTTTCTATAACCCCAAATAGAGAATCACCAGAAATCAAAAAGAAAAGGGACCGAACCC 1135 Query 847 CTTCCAAGTCTCCTAATACGATCAAGTCCGAACCATCCGAGTGGAGTCTCATGCCTGCAG 906 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1136 CTTCCAAGTCTCCTAATACGATCAAGTCCGAACCATCCGAGTGGAGTCTCATGCCTGCAG 1195 Query 907 GCAACAACAACAACAACTATTCGCTTACATCTCAGCATAATGATGACAGTAATGATTCTG 966 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1196 GCAACAACAACAACAACTATTCGCTTACATCTCAGCATAATGATGACAGTAATGATTCTG 1255 Query 967 TCAGTAATTCAACAAACTCCTACAGGAACCACTTGGATAGGTATGATAGTTTGCATGATG 1026 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1256 TCAGTAATTCAACAAACTCCTACAGGAACCACTTGGATAGGTATGATAGTTTGCATGATG 1315 Query 1027 ACAGTTTGCAAGGAGCACATAGTTATTTGGATAGTAAAATATTTGCTGCTGCTGGAGCCT 1086 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 ACAGTTTGCAAGGAGCACATAGTTATTTGGATAGTAAAATATTTGCTGCTGCTGGAGCCT 1375 Query 1087 CTTTCAATTTTAGTATGGCAGCCGCTTTAGCCGCAGATTCATTAGCAGGATTAAATCATC 1146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1376 CTTTCAATTTTAGTATGGCAGCCGCTTTAGCCGCAGATTCATTAGCAGGATTAAATCATC 1435 Query 1147 AACATAATTCAGGGAATACAGGCACTTTAGATTTGACTGGAGGTCCTTCTTCACAAGGTT 1206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1436 AACATAATTCAGGGAATACAGGCACTTTAGATTTGACTGGAGGTCCTTCTTCACAAGGTT 1495 Query 1207 TAGTAATGCCACCTCCACTTAGTGGAGGAATCAATGAACCACAGGACTGCCCCTACTGCA 1266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1496 TAGTAATGCCACCTCCACTTAGTGGAGGAATCAATGAACCACAGGACTGCCCCTACTGCA 1555 Query 1267 GAAGAACATTTAGTTGCTATTACAGCCTGAAAAGACATTTCCAAGACAAGCACGAACGGT 1326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1556 GAAGAACATTTAGTTGCTATTACAGCCTGAAAAGACATTTCCAAGACAAGCACGAACGGT 1615 Query 1327 CTGACACTCTGTATGTGTGCGAGTTTTGTCACCGCAGATATCGAACTAAAAATAGTCTCA 1386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1616 CTGACACTCTGTATGTGTGCGAGTTTTGTCACCGCAGATATCGAACTAAAAATAGTCTCA 1675 Query 1387 CCACACACAAGAGCCTCCAACACAGAGGCACTTCGGGCATGTTGAAACGATTACTCAAAG 1446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1676 CCACACACAAGAGCCTCCAACACAGAGGCACTTCGGGCATGTTGAAACGATTACTCAAAG 1735 Query 1447 GAGGAGCATCGGGGTCCTATGACTACAGAACGTCCACATCTTTATTATTTGATATTACCT 1506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1736 GAGGAGCATCGGGGTCCTATGACTACAGAACGTCCACATCTTTATTATTTGATATTACCT 1795 >DcitrM076455.1.1 Broad-Complex (AHRD V3.11 *-* tr|A0A292GCW5|A0A292GCW5_SCHGR). Similar to MCOT04683.2.CT XP_017300340.1. AED 0.36 Length=591 Score = 553 bits (299), Expect = 2e-156 Identities = 369/397 (93%), Gaps = 28/397 (7%) Strand=Plus/Plus Query 156 ACAACGCCTTGCAAACACCCCGTGATAGTTCTGCAAGATGTGGTCTGGGAAGATCTTCAT 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACAACGCCTTGCAAACACCCCGTGATAGTTCTGCAAGATGTGGTCTGGGAAGATCTTCAT 60 Query 216 GCCCTTGTAGAATTCATTTACCATGGACAAGTCAATGTTCATCAGAAGAATCTAACTTCG 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GCCCTTGTAGAATTCATTTACCATGGACAAGTCAATGTTCATCAGAAGAATCTAACTTCG 120 Query 276 TTTCTAAAGACTGCAGAAGTGTTACGCGTATCTGGTCTTACGCAAAACAGTACAGACATT 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TTTCTAAAGACTGCAGAAGTGTTACGCGTATCTGGTCTTACGCAAAACAGTACAGACATT 180 Query 336 AATCGCGAAACAGGG------------------------TCTCCTTACGGTAAGGTGCCA 371 ||||||||||||||| ||||||||||||||||||||| Sbjct 181 AATCGCGAAACAGGGGTAAGTCCCAGATTCAACTTTAGTTCTCCTTACGGTAAGGTGCCA 240 Query 372 AGTGAGAAAAGTCATAGTGACAACGTCAGTGACTTATCACCCAGACCAGACACCTCCAGA 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 AGTGAGAAAAGTCATAGTGACAACGTCAGTGACTTATCACCCAGACCAGACACCTCCAGA 300 Query 432 CATTCCTCATTTAGTCATCACGTTCGCCATCGAAGTTCACCCCTACTCTCTTCTCCACTC 491 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CATTCCTCATTTAG---TCACGTTCGCCATCGAAGTTCACCCCTACTCTCTTCTCCACTC 357 Query 492 AACAATAAACACCTCTCATCTCCTCTTGCTCAT-GAA 527 ||||||||||||||||||||||||||||||||| ||| Sbjct 358 AACAATAAACACCTCTCATCTCCTCTTGCTCATAGAA 394 Score = 364 bits (197), Expect = 1e-99 Identities = 200/201 (99%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 809 AGAATCACCAGAAATCAAAAAGAAAAGGGACCGAACCCCTTCCAAGTCTCCTAATACGAT 868 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 391 AGAATCACCAGAAATCAAAAAGAAAAGGGA-CGAACCCCTTCCAAGTCTCCTAATACGAT 449 Query 869 CAAGTCCGAACCATCCGAGTGGAGTCTCATGCCTGCAGGCAACAACAACAACAACTATTC 928 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450 CAAGTCCGAACCATCCGAGTGGAGTCTCATGCCTGCAGGCAACAACAACAACAACTATTC 509 Query 929 GCTTACATCTCAGCATAATGATGACAGTAATGATTCTGTCAGTAATTCAACAAACTCCTA 988 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 510 GCTTACATCTCAGCATAATGATGACAGTAATGATTCTGTCAGTAATTCAACAAACTCCTA 569 Query 989 CAGGAACCACTTGGATAGGTA 1009 ||||||||||||||||||||| Sbjct 570 CAGGAACCACTTGGATAGGTA 590 >DcitrM023795.1.1 Broad-complex (AHRD V3.11 *-* tr|U3U9E0|U3U9E0_PSAHI). AED 0.22 Length=390 Score = 355 bits (192), Expect = 6e-97 Identities = 195/196 (99%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 155 GACAACGCCTTGCAAACACCCCGTGATAGTTCTGCAAGATGTGGTCTGGGAAGATCTTCA 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 192 GACAACGCCTTGCAAACACCCCGTGATAGTTCTGCAAGATGTGGTCTGGGAAGATCTTCA 251 Query 215 TGCCCTTGTAGAATTCATTTACCATGGACAAGTCAATGTTCATCAGAAGAATCTAACTTC 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 TGCCCTTGTAGAATTCATTTACCATGGACAAGTCAATGTTCATCAGAAGAATCTAACTTC 311 Query 275 GTTTCTAAAGACTGCAGAAGTGTTACGCGTATCTGGTCTTACGCAAAACAGTACAGACAT 334 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 312 GTTTCT-AAGACTGCAGAAGTGTTACGCGTATCTGGTCTTACGCAAAACAGTACAGACAT 370 Query 335 TAATCGCGAAACAGGG 350 |||||||||||||||| Sbjct 371 TAATCGCGAAACAGGG 386 Score = 187 bits (101), Expect = 2e-46 Identities = 103/104 (99%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 7 ATTATCAAAGTAGCATCACCTCAGCTTTTGAAAATCTCAGGGACGATGAAGATTTCATAG 66 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 89 ATTATCAAAGTAGCATCACCTCAGCTTTCGAAAATCTCAGGGACGATGAAGATTTCATAG 148 Query 67 ATGTCACTTTAGCTTGTGACGGCAAAAGCTTGAAAGCTCATCGG 110 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 149 ATGTCACTTTAGCTTGTGACGGCAAAAGCTTGAAAGCTCATCGG 192 Lambda K H 1.34 0.622 1.13 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71779920080 Database: Dcitr_OGSv2.0_rna.fa Posted date: Mar 4, 2018 10:37 PM Number of letters in database: 49,157,538 Number of sequences in database: 25,292 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5