BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: SS_all_quivered_hq.fasta 42,166 sequences; 76,657,983 total letters Query= XM_017447740.1 Length=738 Score E Sequences producing significant alignments: (Bits) Value c306378/f3p29/5111isoform=c306378;full_length_coverage=3;non_full... 1323 0.0 c354255/f2p29/5297isoform=c354255;full_length_coverage=2;non_full... 1323 0.0 c336616/f2p28/5361isoform=c336616;full_length_coverage=2;non_full... 1323 0.0 >c306378/f3p29/5111 isoform=c306378;full_length_coverage=3;non_full_length_coverage=29;isoform_length=5111 Length=5111 Score = 1323 bits (716), Expect = 0.0 Identities = 731/738 (99%), Gaps = 2/738 (0%) Strand=Plus/Plus Query 1 ATGTACGCATCGAGTTGGTTCTTGACGCTTTTCACCACGGCCCTCGCACTGCCCACAGCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1088 ATGTACGCATCGAGTTGGTTCTTGACGCTTTTCACCACGGCCCTCGCACTGCCCACAGCT 1147 Query 61 TACAGGATAATCGACGTGTTTTTGTCGGAAGGCATGGATATTATATTCAAGGTGGCCCTG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1148 TACAGGATAATCGACGTGTTTTTGTCGGAAGGCATGGATATTATATTCAAGGTGGCCCTG 1207 Query 121 GCTCTACTCGGGATAGGCAAGGAAGCGCTGCTCAGTTTGGACATGGAAGGAATGCTTAAG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1208 GCTCTACTCGGGATAGGCAAGGAAGCGCTGCTCAGTTTGGACATGGAAGGAATGCTTAAG 1267 Query 181 TATTTCCAGAAGGAGCTACCTCTGAAGGCAGACGCAGATCCGGACGCTCTCATGCAAGCC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1268 TATTTCCAGAAGGAGCTACCTCTGAAGGCAGACGCAGATCCGGACGCTCTCATGCAAGCC 1327 Query 241 GCGTACAAAATCTCCTACAACACGAAGAAAATGAAGAAGATGGAGAAGGAGTACACGGTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1328 GCGTACAAAATCTCCTACAACACGAAGAAAATGAAGAAGATGGAGAAGGAGTACACGGTC 1387 Query 301 ATGAAAACCAAAGAACAGGAAGAGATGATTGAACTCAAGAAACTCCGCAATGAGAACCGT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1388 ATGAAAACCAAAGAACAGGAAGAGATGATTGAACTCAAGAAACTCCGCAATGAGAACCGT 1447 Query 361 CTGCTCCGTGGCAAGGTAGAGCTGCTGGAGGCAGAGTCCAGTGAACTCGCTGACCGTCTG 420 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct 1448 CTGCTCCGTGGCAAGGTAGAGCTGCTGGAGGCAGAGTCCAGTGAACTCGCCGACCGTTTG 1507 Query 421 GTGCGAGGTCAAGTGTCTCGGGCCGAGGAAGAAGAGACCACCTATGTGGTGCAGCGGGAA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1508 GTGCGAGGTCAAGTGTCTCGGGCCGAGGAAGAAGAGACCACCTATGTGGTGCAGCGGGAA 1567 Query 481 CTGCTGGCGCTGCGCCACACACATCTGGACACGGCGCATACATTGGAGCTGGCGCAGGAA 540 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1568 CTACTGGCGCTGCGCCACACACATCTGGACACGGCGCATACATTGGAGCTGGCGCAGGAA 1627 Query 541 GAGATTCGTCATCTGAGGAGCTTGGTGGAAGCCAATCATAACTCGTGCCAGAGTTCAATG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1628 GAGATTCGTCATCTGAGGAGCTTGGTGGAAGCCAATCATAACTCGTGCCAGAGTTCAATG 1687 Query 601 GATGAAGCATCACTAAGCAAGGAGAAGCTAACACAGCGAGAAGAGATGATAAAATGTCTT 660 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1688 GATGAGGCATCACTAAGCAAGGAGAAGCTAACACAGCGAGAAGAGATGATCAAATGTCTT 1747 Query 661 CAAGACGAGCTGGTCAAAGTAAGACTCACTGTGGCGGAATCTGATGCCTTTAGTACGAGA 720 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1748 CAAGACGAGCTGGTCAAAGTAAGACTCACTGTGGCGGAATCTGATG-CTTTAGTACGAGA 1806 Query 721 CCCTGCGAGCCAGGATAG 738 ||||||||||||||||| Sbjct 1807 -CCTGCGAGCCAGGATAG 1823 >c354255/f2p29/5297 isoform=c354255;full_length_coverage=2;non_full_length_coverage=29;isoform_length=5297 Length=5297 Score = 1323 bits (716), Expect = 0.0 Identities = 731/738 (99%), Gaps = 2/738 (0%) Strand=Plus/Plus Query 1 ATGTACGCATCGAGTTGGTTCTTGACGCTTTTCACCACGGCCCTCGCACTGCCCACAGCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1287 ATGTACGCATCGAGTTGGTTCTTGACGCTTTTCACCACGGCCCTCGCACTGCCCACAGCT 1346 Query 61 TACAGGATAATCGACGTGTTTTTGTCGGAAGGCATGGATATTATATTCAAGGTGGCCCTG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1347 TACAGGATAATCGACGTGTTTTTGTCGGAAGGCATGGATATTATATTCAAGGTGGCCCTG 1406 Query 121 GCTCTACTCGGGATAGGCAAGGAAGCGCTGCTCAGTTTGGACATGGAAGGAATGCTTAAG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1407 GCTCTACTCGGGATAGGCAAGGAAGCGCTGCTCAGTTTGGACATGGAAGGAATGCTTAAG 1466 Query 181 TATTTCCAGAAGGAGCTACCTCTGAAGGCAGACGCAGATCCGGACGCTCTCATGCAAGCC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1467 TATTTCCAGAAGGAGCTACCTCTGAAGGCAGACGCAGATCCGGACGCTCTCATGCAAGCC 1526 Query 241 GCGTACAAAATCTCCTACAACACGAAGAAAATGAAGAAGATGGAGAAGGAGTACACGGTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1527 GCGTACAAAATCTCCTACAACACGAAGAAAATGAAGAAGATGGAGAAGGAGTACACGGTC 1586 Query 301 ATGAAAACCAAAGAACAGGAAGAGATGATTGAACTCAAGAAACTCCGCAATGAGAACCGT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1587 ATGAAAACCAAAGAACAGGAAGAGATGATTGAACTCAAGAAACTCCGCAATGAGAACCGT 1646 Query 361 CTGCTCCGTGGCAAGGTAGAGCTGCTGGAGGCAGAGTCCAGTGAACTCGCTGACCGTCTG 420 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct 1647 CTGCTCCGTGGCAAGGTAGAGCTGCTGGAGGCAGAGTCCAGTGAACTCGCCGACCGTTTG 1706 Query 421 GTGCGAGGTCAAGTGTCTCGGGCCGAGGAAGAAGAGACCACCTATGTGGTGCAGCGGGAA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1707 GTGCGAGGTCAAGTGTCTCGGGCCGAGGAAGAAGAGACCACCTATGTGGTGCAGCGGGAA 1766 Query 481 CTGCTGGCGCTGCGCCACACACATCTGGACACGGCGCATACATTGGAGCTGGCGCAGGAA 540 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1767 CTACTGGCGCTGCGCCACACACATCTGGACACGGCGCATACATTGGAGCTGGCGCAGGAA 1826 Query 541 GAGATTCGTCATCTGAGGAGCTTGGTGGAAGCCAATCATAACTCGTGCCAGAGTTCAATG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1827 GAGATTCGTCATCTGAGGAGCTTGGTGGAAGCCAATCATAACTCGTGCCAGAGTTCAATG 1886 Query 601 GATGAAGCATCACTAAGCAAGGAGAAGCTAACACAGCGAGAAGAGATGATAAAATGTCTT 660 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1887 GATGAGGCATCACTAAGCAAGGAGAAGCTAACACAGCGAGAAGAGATGATCAAATGTCTT 1946 Query 661 CAAGACGAGCTGGTCAAAGTAAGACTCACTGTGGCGGAATCTGATGCCTTTAGTACGAGA 720 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1947 CAAGACGAGCTGGTCAAAGTAAGACTCACTGTGGCGGAATCTGATG-CTTTAGTACGAGA 2005 Query 721 CCCTGCGAGCCAGGATAG 738 ||||||||||||||||| Sbjct 2006 -CCTGCGAGCCAGGATAG 2022 >c336616/f2p28/5361 isoform=c336616;full_length_coverage=2;non_full_length_coverage=28;isoform_length=5361 Length=5361 Score = 1323 bits (716), Expect = 0.0 Identities = 731/738 (99%), Gaps = 2/738 (0%) Strand=Plus/Plus Query 1 ATGTACGCATCGAGTTGGTTCTTGACGCTTTTCACCACGGCCCTCGCACTGCCCACAGCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1341 ATGTACGCATCGAGTTGGTTCTTGACGCTTTTCACCACGGCCCTCGCACTGCCCACAGCT 1400 Query 61 TACAGGATAATCGACGTGTTTTTGTCGGAAGGCATGGATATTATATTCAAGGTGGCCCTG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1401 TACAGGATAATCGACGTGTTTTTGTCGGAAGGCATGGATATTATATTCAAGGTGGCCCTG 1460 Query 121 GCTCTACTCGGGATAGGCAAGGAAGCGCTGCTCAGTTTGGACATGGAAGGAATGCTTAAG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1461 GCTCTACTCGGGATAGGCAAGGAAGCGCTGCTCAGTTTGGACATGGAAGGAATGCTTAAG 1520 Query 181 TATTTCCAGAAGGAGCTACCTCTGAAGGCAGACGCAGATCCGGACGCTCTCATGCAAGCC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1521 TATTTCCAGAAGGAGCTACCTCTGAAGGCAGACGCAGATCCGGACGCTCTCATGCAAGCC 1580 Query 241 GCGTACAAAATCTCCTACAACACGAAGAAAATGAAGAAGATGGAGAAGGAGTACACGGTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1581 GCGTACAAAATCTCCTACAACACGAAGAAAATGAAGAAGATGGAGAAGGAGTACACGGTC 1640 Query 301 ATGAAAACCAAAGAACAGGAAGAGATGATTGAACTCAAGAAACTCCGCAATGAGAACCGT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1641 ATGAAAACCAAAGAACAGGAAGAGATGATTGAACTCAAGAAACTCCGCAATGAGAACCGT 1700 Query 361 CTGCTCCGTGGCAAGGTAGAGCTGCTGGAGGCAGAGTCCAGTGAACTCGCTGACCGTCTG 420 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct 1701 CTGCTCCGTGGCAAGGTAGAGCTGCTGGAGGCAGAGTCCAGTGAACTCGCCGACCGTTTG 1760 Query 421 GTGCGAGGTCAAGTGTCTCGGGCCGAGGAAGAAGAGACCACCTATGTGGTGCAGCGGGAA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1761 GTGCGAGGTCAAGTGTCTCGGGCCGAGGAAGAAGAGACCACCTATGTGGTGCAGCGGGAA 1820 Query 481 CTGCTGGCGCTGCGCCACACACATCTGGACACGGCGCATACATTGGAGCTGGCGCAGGAA 540 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1821 CTACTGGCGCTGCGCCACACACATCTGGACACGGCGCATACATTGGAGCTGGCGCAGGAA 1880 Query 541 GAGATTCGTCATCTGAGGAGCTTGGTGGAAGCCAATCATAACTCGTGCCAGAGTTCAATG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1881 GAGATTCGTCATCTGAGGAGCTTGGTGGAAGCCAATCATAACTCGTGCCAGAGTTCAATG 1940 Query 601 GATGAAGCATCACTAAGCAAGGAGAAGCTAACACAGCGAGAAGAGATGATAAAATGTCTT 660 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1941 GATGAGGCATCACTAAGCAAGGAGAAGCTAACACAGCGAGAAGAGATGATCAAATGTCTT 2000 Query 661 CAAGACGAGCTGGTCAAAGTAAGACTCACTGTGGCGGAATCTGATGCCTTTAGTACGAGA 720 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2001 CAAGACGAGCTGGTCAAAGTAAGACTCACTGTGGCGGAATCTGATG-CTTTAGTACGAGA 2059 Query 721 CCCTGCGAGCCAGGATAG 738 ||||||||||||||||| Sbjct 2060 -CCTGCGAGCCAGGATAG 2076 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53799906904 Database: SS_all_quivered_hq.fasta Posted date: Feb 25, 2019 4:32 PM Number of letters in database: 76,657,983 Number of sequences in database: 42,166 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5