TBLASTN 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: Candidatus_Liberibacter_asiaticus_psy62_genome.fasta
           1 sequences; 1,227,328 total letters



Query= Untitled_sequence

Length=108
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|346722692|ref|NC_012985.3|  Candidatus Liberibacter asiaticus ...  219     3e-69


>gi|346722692|ref|NC_012985.3| Candidatus Liberibacter asiaticus str. psy62 chromosome, complete 
genome
Length=1227328

 Score = 219 bits (559),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
 Frame = -1

Query  1       MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN  60
               MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN
Sbjct  276403  MMIEQIQGTNSFISHTDTIGMRYDFTQNSNEEGGSSPISFSALLQDMAKGAIGDMEKAEN  276224

Query  61      VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI  108
               VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI
Sbjct  276223  VSLAALQGKTSMREAVDHIMQAERTLNLSIALRDKILSAVSEVSKMQI  276080



Lambda      K        H        a         alpha
   0.313    0.125    0.322    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 17588892


  Database: Candidatus_Liberibacter_asiaticus_psy62_genome.fasta
    Posted date:  Jul 20, 2015  1:36 PM
  Number of letters in database: 1,227,328
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40